Np mrd loader

Record Information
Version2.0
Created at2021-06-19 22:29:44 UTC
Updated at2021-06-29 23:59:57 UTC
NP-MRD IDNP0031407
Secondary Accession NumbersNone
Natural Product Identification
Common Namedelta1-lupenone
Provided ByJEOL DatabaseJEOL Logo
DescriptionGlochidone is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. delta1-lupenone is found in Byrsonima microphylla, Glochidion eriocarpum, Glochidion zeylanicum, Phyllanthus flexuosus, Phyllanthus sellowianus and Phyllanthus taxodiifolius. delta1-lupenone was first documented in 2003 (PMID: 15615412). Based on a literature review a significant number of articles have been published on glochidone (PMID: 22536331) (PMID: 31815547) (PMID: 19521844) (PMID: 19122328) (PMID: 16450297).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC30H46O
Average Mass422.6970 Da
Monoisotopic Mass422.35487 Da
IUPAC Name(1R,2R,5R,8R,9R,10R,13R,14R,19R)-1,2,5,14,18,18-hexamethyl-8-(prop-1-en-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicos-15-en-17-one
Traditional Name(1R,2R,5R,8R,9R,10R,13R,14R,19R)-1,2,5,14,18,18-hexamethyl-8-(prop-1-en-2-yl)pentacyclo[11.8.0.0^{2,10}.0^{5,9}.0^{14,19}]henicos-15-en-17-one
CAS Registry NumberNot Available
SMILES
[H]C([H])=C(C([H])([H])[H])[C@]1([H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])C([H])([H])C([H])([H])[C@]3(C([H])([H])[H])[C@]([H])(C([H])([H])C([H])([H])[C@]4([H])[C@]5(C([H])=C([H])C(=O)C(C([H])([H])[H])(C([H])([H])[H])[C@]5([H])C([H])([H])C([H])([H])[C@@]34C([H])([H])[H])C([H])([H])[H])[C@@]12[H]
InChI Identifier
InChI=1S/C30H46O/c1-19(2)20-11-14-27(5)17-18-29(7)21(25(20)27)9-10-23-28(6)15-13-24(31)26(3,4)22(28)12-16-30(23,29)8/h13,15,20-23,25H,1,9-12,14,16-18H2,2-8H3/t20-,21+,22-,23+,25+,27+,28-,29+,30+/m0/s1
InChI KeyFWBYBHVDDGVPDF-BHMAJAPKSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Byrsonima microphyllaJEOL database
    • Aguiar, R. M., et al, Phytochemistry 66, 2388 (2005)
Glochidion eriocarpumLOTUS Database
Glochidion hohenackeriKNApSAcK Database
Glochidion philippicumKNApSAcK Database
Glochidion puberumKNApSAcK Database
Glochidion sp.KNApSAcK Database
Glochidion zeylanicumLOTUS Database
Maytenus chiapensisKNApSAcK Database
Maytenus cuzcoinaKNApSAcK Database
Phyllanthus flexuosusLOTUS Database
Phyllanthus sellowianusLOTUS Database
Phyllanthus taxodiifoliusLOTUS Database
Species Where Detected
Species NameSourceReference
Cyathus helenaeKNApSAcK Database
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP6.1ALOGPS
logP8.01ChemAxon
logS-6.9ALOGPS
pKa (Strongest Basic)-5ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area17.07 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity131.18 m³·mol⁻¹ChemAxon
Polarizability52.45 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00023788
Chemspider ID10294807
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID67596
Good Scents IDNot Available
References
General References
  1. Gao LM, Wei XM, He YQ: [Studies on chemical constituents of Clerodendrum bungei]. Zhongguo Zhong Yao Za Zhi. 2003 Nov;28(11):1042-4. [PubMed:15615412 ]
  2. Ramasamy S, Abdul Wahab N, Zainal Abidin N, Manickam S, Zakaria Z: Growth inhibition of human gynecologic and colon cancer cells by Phyllanthus watsonii through apoptosis induction. PLoS One. 2012;7(4):e34793. doi: 10.1371/journal.pone.0034793. Epub 2012 Apr 20. [PubMed:22536331 ]
  3. Sichaem J, Vo HC, Nha-Tran T, Jarupinthusophon S, Niamnont N, Srikittiwanna K, Nguyen TK, Tran TN, Le TT, Duong TH: 29-Norlupane-1beta-hydroxy-3,20-dione, a new norlupane triterpenoid from the twigs and leaves of Phyllanthus acidus. Nat Prod Res. 2019 Dec 9:1-6. doi: 10.1080/14786419.2019.1700252. [PubMed:31815547 ]
  4. Catapan E, Moreno FN, Luis Busi da Silva M, Otuki MF, Niero R, Filho VC, Augusto Yunes R, Viana AM: Protocols for in vitro culture and phytochemical analysis of Phyllanthus species (euphorbiaceae). Methods Mol Biol. 2009;547:167-77. doi: 10.1007/978-1-60327-287-2_14. [PubMed:19521844 ]
  5. Kiem PV, Thu VK, Yen PH, Nhiem NX, Tung NH, Cuong NX, Minh CV, Huong HT, Hyun JH, Kang HK, Kim YH: New triterpenoid saponins from Glochidion eriocarpum and their cytotoxic activity. Chem Pharm Bull (Tokyo). 2009 Jan;57(1):102-5. doi: 10.1248/cpb.57.102. [PubMed:19122328 ]
  6. Tuchinda P, Kumkao A, Pohmakotr M, Sophasan S, Santisuk T, Reutrakul V: Cytotoxic arylnaphthalide lignan glycosides from the aerial parts of Phyllanthus taxodiifolius. Planta Med. 2006 Jan;72(1):60-2. doi: 10.1055/s-2005-873141. [PubMed:16450297 ]
  7. Aguiar, R. M., et al. (2005). Aguiar, R. M., et al, Phytochemistry 66, 2388 (2005) . Phytochem..