NP-MRD: Showing NP-Card for daidzein-4'-rhamnopyranoside (NP0031193)

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Record Information

Version

2.0

Created at

2021-06-19 22:20:50 UTC

Updated at

2021-06-29 23:59:37 UTC

NP-MRD ID

NP0031193

Secondary Accession Numbers

None

Natural Product Identification

Common Name

daidzein-4'-rhamnopyranoside

Provided By

JEOL Database JEOL Logo

Description

daidzein-4'-rhamnopyranoside is found in Mortierella isabellina. daidzein-4'-rhamnopyranoside was first documented in 2005 (Maatooq, G. T., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306202100203D          

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M  END

     RDKit          3D

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  Mrv1652306202100203D          

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 20 21  2  0  0  0  0
 10  9  1  0  0  0  0
  9  8  1  0  0  0  0
 19 18  2  0  0  0  0
  8  7  2  0  0  0  0
  4 24  1  0  0  0  0
  7  6  1  0  0  0  0
 18 17  1  0  0  0  0
  6 23  2  0  0  0  0
 24 26  1  0  0  0  0
 23 22  1  0  0  0  0
 22  9  2  0  0  0  0
 17 15  2  0  0  0  0
 15 16  1  0  0  0  0
  6  5  1  0  0  0  0
  2  1  1  0  0  0  0
  4  5  1  0  0  0  0
 25 45  1  0  0  0  0
  4 34  1  6  0  0  0
 28 48  1  1  0  0  0
 29 49  1  0  0  0  0
 26 46  1  6  0  0  0
 27 47  1  0  0  0  0
 24 44  1  1  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  1 32  1  0  0  0  0
  2 33  1  6  0  0  0
 18 41  1  0  0  0  0
 17 40  1  0  0  0  0
 14 38  1  0  0  0  0
 11 37  1  0  0  0  0
  8 36  1  0  0  0  0
  7 35  1  0  0  0  0
 23 43  1  0  0  0  0
 22 42  1  0  0  0  0
 16 39  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0031193

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C([H])C([H])=C2C(=O)C(=C([H])OC2=C1[H])C1=C([H])C([H])=C(O[C@]2([H])O[C@]([H])(C([H])([H])[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]2([H])O[H])C([H])=C1[H]

> <INCHI_IDENTIFIER>
InChI=1S/C21H20O8/c1-10-17(23)19(25)20(26)21(28-10)29-13-5-2-11(3-6-13)15-9-27-16-8-12(22)4-7-14(16)18(15)24/h2-10,17,19-23,25-26H,1H3/t10-,17-,19+,20-,21+/m1/s1

> <INCHI_KEY>
ZYJKABXITBZXHW-QIANFROJSA-N

> <FORMULA>
C21H20O8

> <MOLECULAR_WEIGHT>
400.383

> <EXACT_MASS>
400.115817604

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
41.3575846361321

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
7-hydroxy-3-(4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)-4H-chromen-4-one

> <ALOGPS_LOGP>
1.60

> <JCHEM_LOGP>
1.509279584666667

> <ALOGPS_LOGS>
-3.09

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
12.213623740822614

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.478226939853699

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6122003585840687

> <JCHEM_POLAR_SURFACE_AREA>
125.68000000000002

> <JCHEM_REFRACTIVITY>
100.3027

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.28e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
7-hydroxy-3-(4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 49 52  0  0  0  0  0  0  0  0999 V2000
   -2.2536   -4.5558   -3.4048 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2700   -3.4866   -3.8674 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2699   -3.3505   -2.8495 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6677   -2.3097   -3.1345 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6673   -2.2104   -2.1078 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3114   -1.6114   -0.9323 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150   -1.3034   -0.5261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2086   -0.6826    0.7096 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8568   -0.3680    1.5628 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6086    0.2817    2.8630 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1336   -0.2219    3.9915 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9784    0.2692    5.2653 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2030    1.3881    5.4264 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0532    1.8801    6.7221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7252    3.0133    6.9386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8460    3.4622    8.2201 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3574    3.6639    5.8815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2062    3.1693    4.5843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4239    2.0295    4.3608 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2515    1.4919    2.9989 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7959    2.0320    2.0427 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1570   -0.6876    1.1492 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3784   -1.3081   -0.0844 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4291   -2.6333   -4.4355 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3455   -1.5862   -4.7982 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4351   -2.8193   -5.5786 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1180   -3.2446   -6.7694 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6288   -3.8558   -5.2134 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6075   -3.9045   -6.2539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0736   -4.6856   -4.1171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7492   -5.5189   -3.2694 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6786   -4.2854   -2.4320 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8222   -2.5416   -3.9548 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1593   -1.3413   -3.2443 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8505   -1.5419   -1.1356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2319   -0.4469    0.9977 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7541   -1.1100    4.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5384    1.3855    7.5586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4126    4.2516    8.2265 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9657    4.5484    6.0450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6951    3.6700    3.7511 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0142   -0.4497    1.7750 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3945   -1.5501   -0.3861 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0311   -3.5424   -4.3128 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8881   -1.4194   -4.0023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0378   -1.8634   -5.8371 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8820   -2.6383   -6.8540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1638   -4.8481   -5.1560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0943   -3.9905   -7.0829 H   0  0  0  0  0  0  0  0  0  0  0  0
 26 28  1  0
 15 14  1  0
 14 13  2  0
 13 19  1  0
 28  2  1  0
  2  3  1  0
  3  4  1  0
 24 25  1  0
 28 29  1  0
 13 12  1  0
 19 20  1  0
 20 10  1  0
 10 11  2  0
 11 12  1  0
 26 27  1  0
 20 21  2  0
 10  9  1  0
  9  8  1  0
 19 18  2  0
  8  7  2  0
  4 24  1  0
  7  6  1  0
 18 17  1  0
  6 23  2  0
 24 26  1  0
 23 22  1  0
 22  9  2  0
 17 15  2  0
 15 16  1  0
  6  5  1  0
  2  1  1  0
  4  5  1  0
 25 45  1  0
  4 34  1  6
 28 48  1  1
 29 49  1  0
 26 46  1  6
 27 47  1  0
 24 44  1  1
  1 30  1  0
  1 31  1  0
  1 32  1  0
  2 33  1  6
 18 41  1  0
 17 40  1  0
 14 38  1  0
 11 37  1  0
  8 36  1  0
  7 35  1  0
 23 43  1  0
 22 42  1  0
 16 39  1  0
M  END

HEADER    PROTEIN                                 20-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-JUN-21         0                                  
HETATM    1  C   UNK     0      -2.254  -4.556  -3.405  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.270  -3.487  -3.867  0.00  0.00           C+0
HETATM    3  O   UNK     0      -0.270  -3.350  -2.849  0.00  0.00           O+0
HETATM    4  C   UNK     0       0.668  -2.310  -3.135  0.00  0.00           C+0
HETATM    5  O   UNK     0       1.667  -2.210  -2.108  0.00  0.00           O+0
HETATM    6  C   UNK     0       1.311  -1.611  -0.932  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.015  -1.303  -0.526  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.209  -0.683   0.710  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.857  -0.368   1.563  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.609   0.282   2.863  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.134  -0.222   3.991  0.00  0.00           C+0
HETATM   12  O   UNK     0       0.978   0.269   5.265  0.00  0.00           O+0
HETATM   13  C   UNK     0       0.203   1.388   5.426  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.053   1.880   6.722  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.725   3.013   6.939  0.00  0.00           C+0
HETATM   16  O   UNK     0      -0.846   3.462   8.220  0.00  0.00           O+0
HETATM   17  C   UNK     0      -1.357   3.664   5.882  0.00  0.00           C+0
HETATM   18  C   UNK     0      -1.206   3.169   4.584  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.424   2.030   4.361  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.252   1.492   2.999  0.00  0.00           C+0
HETATM   21  O   UNK     0      -0.796   2.032   2.043  0.00  0.00           O+0
HETATM   22  C   UNK     0       2.157  -0.688   1.149  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.378  -1.308  -0.084  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.429  -2.633  -4.436  0.00  0.00           C+0
HETATM   25  O   UNK     0       2.345  -1.586  -4.798  0.00  0.00           O+0
HETATM   26  C   UNK     0       0.435  -2.819  -5.579  0.00  0.00           C+0
HETATM   27  O   UNK     0       1.118  -3.245  -6.769  0.00  0.00           O+0
HETATM   28  C   UNK     0      -0.629  -3.856  -5.213  0.00  0.00           C+0
HETATM   29  O   UNK     0      -1.607  -3.905  -6.254  0.00  0.00           O+0
HETATM   30  H   UNK     0      -3.074  -4.686  -4.117  0.00  0.00           H+0
HETATM   31  H   UNK     0      -1.749  -5.519  -3.269  0.00  0.00           H+0
HETATM   32  H   UNK     0      -2.679  -4.285  -2.432  0.00  0.00           H+0
HETATM   33  H   UNK     0      -1.822  -2.542  -3.955  0.00  0.00           H+0
HETATM   34  H   UNK     0       0.159  -1.341  -3.244  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.851  -1.542  -1.136  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.232  -0.447   0.998  0.00  0.00           H+0
HETATM   37  H   UNK     0       1.754  -1.110   4.026  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.538   1.385   7.559  0.00  0.00           H+0
HETATM   39  H   UNK     0      -1.413   4.252   8.226  0.00  0.00           H+0
HETATM   40  H   UNK     0      -1.966   4.548   6.045  0.00  0.00           H+0
HETATM   41  H   UNK     0      -1.695   3.670   3.751  0.00  0.00           H+0
HETATM   42  H   UNK     0       3.014  -0.450   1.775  0.00  0.00           H+0
HETATM   43  H   UNK     0       3.394  -1.550  -0.386  0.00  0.00           H+0
HETATM   44  H   UNK     0       2.031  -3.542  -4.313  0.00  0.00           H+0
HETATM   45  H   UNK     0       2.888  -1.419  -4.002  0.00  0.00           H+0
HETATM   46  H   UNK     0      -0.038  -1.863  -5.837  0.00  0.00           H+0
HETATM   47  H   UNK     0       1.882  -2.638  -6.854  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.164  -4.848  -5.156  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.094  -3.990  -7.083  0.00  0.00           H+0
CONECT    1    2   30   31   32                                             
CONECT    2   28    3    1   33                                             
CONECT    3    2    4                                                       
CONECT    4    3   24    5   34                                             
CONECT    5    6    4                                                       
CONECT    6    7   23    5                                                  
CONECT    7    8    6   35                                                  
CONECT    8    9    7   36                                                  
CONECT    9   10    8   22                                                  
CONECT   10   20   11    9                                                  
CONECT   11   10   12   37                                                  
CONECT   12   13   11                                                       
CONECT   13   14   19   12                                                  
CONECT   14   15   13   38                                                  
CONECT   15   14   17   16                                                  
CONECT   16   15   39                                                       
CONECT   17   18   15   40                                                  
CONECT   18   19   17   41                                                  
CONECT   19   13   20   18                                                  
CONECT   20   19   10   21                                                  
CONECT   21   20                                                            
CONECT   22   23    9   42                                                  
CONECT   23    6   22   43                                                  
CONECT   24   25    4   26   44                                             
CONECT   25   24   45                                                       
CONECT   26   28   27   24   46                                             
CONECT   27   26   47                                                       
CONECT   28   26    2   29   48                                             
CONECT   29   28   49                                                       
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    1                                                            
CONECT   33    2                                                            
CONECT   34    4                                                            
CONECT   35    7                                                            
CONECT   36    8                                                            
CONECT   37   11                                                            
CONECT   38   14                                                            
CONECT   39   16                                                            
CONECT   40   17                                                            
CONECT   41   18                                                            
CONECT   42   22                                                            
CONECT   43   23                                                            
CONECT   44   24                                                            
CONECT   45   25                                                            
CONECT   46   26                                                            
CONECT   47   27                                                            
CONECT   48   28                                                            
CONECT   49   29                                                            
MASTER        0    0    0    0    0    0    0    0   49    0  104    0
END

RDKit          3D

49 52  0  0  0  0  0  0  0  0999 V2000
   -2.2536   -4.5558   -3.4048 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2700   -3.4866   -3.8674 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.2699   -3.3505   -2.8495 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6677   -2.3097   -3.1345 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6673   -2.2104   -2.1078 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3114   -1.6114   -0.9323 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0150   -1.3034   -0.5261 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2086   -0.6826    0.7096 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8568   -0.3680    1.5628 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6086    0.2817    2.8630 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1336   -0.2219    3.9915 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9784    0.2692    5.2653 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2030    1.3881    5.4264 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0532    1.8801    6.7221 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7252    3.0133    6.9386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8460    3.4622    8.2201 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3574    3.6639    5.8815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2062    3.1693    4.5843 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4239    2.0295    4.3608 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2515    1.4919    2.9989 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7959    2.0320    2.0427 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1570   -0.6876    1.1492 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3784   -1.3081   -0.0844 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4291   -2.6333   -4.4355 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3455   -1.5862   -4.7982 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4351   -2.8193   -5.5786 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1180   -3.2446   -6.7694 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6288   -3.8558   -5.2134 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6075   -3.9045   -6.2539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0736   -4.6856   -4.1171 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7492   -5.5189   -3.2694 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6786   -4.2854   -2.4320 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8222   -2.5416   -3.9548 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1593   -1.3413   -3.2443 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8505   -1.5419   -1.1356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2319   -0.4469    0.9977 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7541   -1.1100    4.0260 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5384    1.3855    7.5586 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4126    4.2516    8.2265 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9657    4.5484    6.0450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6951    3.6700    3.7511 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0142   -0.4497    1.7750 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3945   -1.5501   -0.3861 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0311   -3.5424   -4.3128 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8881   -1.4194   -4.0023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0378   -1.8634   -5.8371 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8820   -2.6383   -6.8540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1638   -4.8481   -5.1560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0943   -3.9905   -7.0829 H   0  0  0  0  0  0  0  0  0  0  0  0
 26 28  1  0
 15 14  1  0
 14 13  2  0
 13 19  1  0
 28  2  1  0
  2  3  1  0
  3  4  1  0
 24 25  1  0
 28 29  1  0
 13 12  1  0
 19 20  1  0
 20 10  1  0
 10 11  2  0
 11 12  1  0
 26 27  1  0
 20 21  2  0
 10  9  1  0
  9  8  1  0
 19 18  2  0
  8  7  2  0
  4 24  1  0
  7  6  1  0
 18 17  1  0
  6 23  2  0
 24 26  1  0
 23 22  1  0
 22  9  2  0
 17 15  2  0
 15 16  1  0
  6  5  1  0
  2  1  1  0
  4  5  1  0
 25 45  1  0
  4 34  1  6
 28 48  1  1
 29 49  1  0
 26 46  1  6
 27 47  1  0
 24 44  1  1
  1 30  1  0
  1 31  1  0
  1 32  1  0
  2 33  1  6
 18 41  1  0
 17 40  1  0
 14 38  1  0
 11 37  1  0
  8 36  1  0
  7 35  1  0
 23 43  1  0
 22 42  1  0
 16 39  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₂₀O₈

Average Mass

400.3830 Da

Monoisotopic Mass

400.11582 Da

IUPAC Name

7-hydroxy-3-(4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)-4H-chromen-4-one

Traditional Name

7-hydroxy-3-(4-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)chromen-4-one

CAS Registry Number

Not Available

SMILES

[H]OC1=C([H])C([H])=C2C(=O)C(=C([H])OC2=C1[H])C1=C([H])C([H])=C(O[C@]2([H])O[C@]([H])(C([H])([H])[H])[C@@]([H])(O[H])[C@]([H])(O[H])[C@@]2([H])O[H])C([H])=C1[H]

InChI Identifier

InChI=1S/C21H20O8/c1-10-17(23)19(25)20(26)21(28-10)29-13-5-2-11(3-6-13)15-9-27-16-8-12(22)4-7-14(16)18(15)24/h2-10,17,19-23,25-26H,1H3/t10-,17-,19+,20-,21+/m1/s1

InChI Key

ZYJKABXITBZXHW-QIANFROJSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Umbelopsis isabellina	JEOL database	Maatooq, G. T., et al, Phytochemistry 66, 1007 (2005)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.6	ALOGPS
logP	1.51	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	6.48	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	125.68 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	100.3 m³·mol⁻¹	ChemAxon
Polarizability	41.36 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Maatooq, G. T., et al. (2005). Maatooq, G. T., et al, Phytochemistry 66, 1007 (2005) . Phytochem..

Showing NP-Card for daidzein-4'-rhamnopyranoside (NP0031193)

MOL for NP0031193 (daidzein-4'-rhamnopyranoside)

3D MOL for NP0031193 (daidzein-4'-rhamnopyranoside)

3D SDF for NP0031193 (daidzein-4'-rhamnopyranoside)

3D-SDF for NP0031193 (daidzein-4'-rhamnopyranoside)

PDB for NP0031193 (daidzein-4'-rhamnopyranoside)

3D PDB for NP0031193 (daidzein-4'-rhamnopyranoside)

SMILES for NP0031193 (daidzein-4'-rhamnopyranoside)

INCHI for NP0031193 (daidzein-4'-rhamnopyranoside)

Structure for NP0031193 (daidzein-4'-rhamnopyranoside)

3D Structure for NP0031193 (daidzein-4'-rhamnopyranoside)