Np mrd loader

Record Information
Version2.0
Created at2021-06-19 21:52:15 UTC
Updated at2021-08-20 00:00:18 UTC
NP-MRD IDNP0030537
Secondary Accession NumbersNone
Natural Product Identification
Common Namezingiberene
Provided ByJEOL DatabaseJEOL Logo
DescriptionZingiberene, also known as alpha-zingiberene, belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. Thus, zingiberene is considered to be an isoprenoid. zingiberene is found in Achyrospermum africanum, Alpinia densibracteata T. L., Artemisia gmelinii, Bahia ambrosioides, Calea jamaicensis, Carica papaya , Chaerophyllum azoricum, Chrysanthemum indicum, Cinnamomum sieboldii, Gundelia tournefortii, Helichrysum odoratissimum, Humulus lupulus, Lantana strigocamara, Litchi chinensis, Ocimum sanctum , Onoseris onoseroides, Pelargonium endlicherianum, Rhanterium epapposum, Rugelia nudicaulis, Salvia aurea, Sideritis montana, Solanum agrimoniifolium, Solidago canadensis, Swertia japonica, Vitex agnus-castus and Zanthoxylum simulans. zingiberene was first documented in 2021 (PMID: 34290338). Based on a literature review very few articles have been published on Zingiberene (PMID: 34121027) (PMID: 34072598) (PMID: 33915043) (PMID: 33800364).
Structure
Thumb
Synonyms
ValueSource
(-)-alpha-ZingibereneChEBI
(-)-ZingibereneChEBI
(5R)-5-[(1S)-1,5-Dimethyl-4-hexenyl]-2-methyl-1,3-cyclohexadieneChEBI
alpha-ZingibereneChEBI
(-)-a-ZingibereneGenerator
(-)-Α-zingibereneGenerator
a-ZingibereneGenerator
Α-zingibereneGenerator
Chemical FormulaC15H24
Average Mass204.3570 Da
Monoisotopic Mass204.18780 Da
IUPAC Name(5R)-2-methyl-5-[(2S)-6-methylhept-5-en-2-yl]cyclohexa-1,3-diene
Traditional Namezingiberene
CAS Registry NumberNot Available
SMILES
[H]C(=C(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(C([H])([H])[H])[C@]1([H])C([H])=C([H])C(=C([H])C1([H])[H])C([H])([H])[H]
InChI Identifier
InChI=1S/C15H24/c1-12(2)6-5-7-14(4)15-10-8-13(3)9-11-15/h6,8-10,14-15H,5,7,11H2,1-4H3/t14-,15+/m0/s1
InChI KeyKKOXKGNSUHTUBV-LSDHHAIUSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Achyrospermum africanumLOTUS Database
Alpinia densibracteata T. L.JEOL database
    • Sy, L. -K., et al, Magn. Reson. Chem. 35, 424 (1997)
Anthemis aciphylla BOISS.var.discoidea BOISSKNApSAcK Database
Artemisia gmeliniiLOTUS Database
Bahia ambrosioidesLOTUS Database
Calea jamaicensisLOTUS Database
Carica papayaKNApSAcK Database
Carica papaya L.Plant
Chaerophyllum azoricumLOTUS Database
Chrysanthemum indicumLOTUS Database
Cinnamomum sieboldiiLOTUS Database
Cistus albidusKNApSAcK Database
Curcuma amanda RoxbKNApSAcK Database
Curcuma domesticaKNApSAcK Database
Curcuma longaKNApSAcK Database
Curcuma phaeocaulisKNApSAcK Database
Curcuma spp.KNApSAcK Database
Curcuma zedoariaKNApSAcK Database
Daucus carota ssp. sativusFooDB
Gundelia tournefortiiLOTUS Database
Helichrysum odoratissimumLOTUS Database
Humulus lupulusLOTUS Database
Lantana strigocamaraLOTUS Database
Litchi chinensisLOTUS Database
Murraya exoticaKNApSAcK Database
Murraya paniculataKNApSAcK Database
Ocimum basilicumKNApSAcK Database
Ocimum sanctumKNApSAcK Database
Ocimum tenuiflorumPlant
Onoseris onoseroidesLOTUS Database
Pelargonium endlicherianumLOTUS Database
Petasites albusKNApSAcK Database
Petasites hybridusKNApSAcK Database
Pimpinella anisumFooDB
Pinus halepensisKNApSAcK Database
Piper longumKNApSAcK Database
Piper nigrumKNApSAcK Database
Piper nigrum L.FooDB
Polygonum minusKNApSAcK Database
Quercus cocciferaKNApSAcK Database
Rhanterium epapposumLOTUS Database
Rosmarinus officinalisKNApSAcK Database
Rugelia nudicaulisLOTUS Database
Salvia africana-luteaLOTUS Database
Salvia rosmarinusFooDB
Senecio vulgarisKNApSAcK Database
Sideritis montanaLOTUS Database
Solanum agrimoniifoliumLOTUS Database
Solanum habrochaitesKNApSAcK Database
Solidago canadensisLOTUS Database
Swertia japonicaLOTUS Database
Syzygium aromaticumFooDB
Taiwania cryptomerioidesKNApSAcK Database
Thymus serpyllumKNApSAcK Database
Vitex agnus-castusLOTUS Database
Zanthoxylum simulansLOTUS Database
Zingiber officinaleKNApSAcK Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentSesquiterpenoids
Alternative Parents
Substituents
  • Bisabolane sesquiterpenoid
  • Sesquiterpenoid
  • Branched unsaturated hydrocarbon
  • Cyclic olefin
  • Unsaturated aliphatic hydrocarbon
  • Unsaturated hydrocarbon
  • Olefin
  • Hydrocarbon
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point167.00 to 168.00 °C. @ 50.00 mm HgThe Good Scents Company Information System
Water Solubility0.015 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP6.375 (est)The Good Scents Company Information System
Predicted Properties
PropertyValueSource
logP5.77ALOGPS
logP4.87ChemAxon
logS-4.5ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity71.62 m³·mol⁻¹ChemAxon
Polarizability26.39 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00003204
Chemspider ID83751
KEGG Compound IDC09750
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkZingiberene
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID10115
Good Scents IDrw1037961
References
General References
  1. Utama-Ang N, Sida S, Wanachantararak P, Kawee-Ai A: Development of edible Thai rice film fortified with ginger extract using microwave-assisted extraction for oral antimicrobial properties. Sci Rep. 2021 Jul 21;11(1):14870. doi: 10.1038/s41598-021-94430-y. [PubMed:34290338 ]
  2. Costa-Oliveira CD, Ramos YJ, Queiroz GA, Guimaraes EF, Vicosa AL, Moreira DL: Essential Oils from Piper lhotzkyanum Kunth Leaves from Brazilian Atlantic Forest: Chemical Composition and Stability in Different Storage Conditions. J Oleo Sci. 2021 Jul 1;70(7):995-1005. doi: 10.5650/jos.ess20332. Epub 2021 Jun 11. [PubMed:34121027 ]
  3. Franco CJP, Ferreira OO, Antonio Barbosa de Moraes A, Varela ELP, Nascimento LDD, Percario S, de Oliveira MS, Andrade EHA: Chemical Composition and Antioxidant Activity of Essential Oils from Eugenia patrisii Vahl, E. punicifolia (Kunth) DC., and Myrcia tomentosa (Aubl.) DC., Leaf of Family Myrtaceae. Molecules. 2021 May 29;26(11). pii: molecules26113292. doi: 10.3390/molecules26113292. [PubMed:34072598 ]
  4. Dai Z, Pomraning KR, Panisko EA, Hofstad BA, Campbell KB, Kim J, Robles AL, Deng S, Magnuson JK: Genetically Engineered Oleaginous Yeast Lipomyces starkeyi for Sesquiterpene alpha-Zingiberene Production. ACS Synth Biol. 2021 May 21;10(5):1000-1008. doi: 10.1021/acssynbio.0c00503. Epub 2021 Apr 29. [PubMed:33915043 ]
  5. Ivanovic M, Makoter K, Islamcevic Razborsek M: Comparative Study of Chemical Composition and Antioxidant Activity of Essential Oils and Crude Extracts of Four Characteristic Zingiberaceae Herbs. Plants (Basel). 2021 Mar 8;10(3). pii: plants10030501. doi: 10.3390/plants10030501. [PubMed:33800364 ]
  6. Sy, L. -K., et al. (1997). Sy, L. -K., et al, Magn. Reson. Chem. 35, 424 (1997). Mag. Reson. Chem..