Np mrd loader

Record Information
Version2.0
Created at2021-06-19 21:48:28 UTC
Updated at2021-08-20 00:00:17 UTC
NP-MRD IDNP0030457
Secondary Accession NumbersNone
Natural Product Identification
Common Namehederagenin
Provided ByJEOL DatabaseJEOL Logo
DescriptionHederagenin, also known as astrantiagenin e or caulosapogenin, belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. hederagenin is found in Abrus precatorius, Akebia quinata, Akebia trifoliata, Albizia schimperiana, Anemoclema glaucifolium, Anemone cernua, Atractylis carduus, Bellis perennis, Blighia sapida, Caltha palustris, Campsis grandiflora, Caryocar microcarpum, Caulophyllum thalictroides, Cephalaria paphlagonica, Chenopodium quinoa, Clematis chinensis, Clematis vitalba, Conandron ramondioides Sieb.et Zucc. , Coussarea brevicaulis, Cussonia holstii, Cydonia oblonga, Dipsacus asperoides, Dipsacus inermis, Dipsacus laciniatus, Drypetes inaequalis, Elattostachys apetala, Eucalyptus perriniana, Fagonia indica, Fatsia japonica, Ficaria verna Hudson , Galeopsis angustifolia, Gardenia ternifolia, Hedera colchica, Hedera helix, Hedera hibernica, Hedyotis lawsoniae, Schefflera rhododendrifolia, Holboellia latifolia, Hydrocotyle ranunculoides, Kalopanax septemlobus, Lantana camara, Medicago arabica, Medicago arborea, Medicago hybrida, Medicago lupulina, Medicago polymorpha , Mimusops elengi, Morinda citrifolia, Morus alba, Mosla chinensis, Neolamarckia cadamba, Nephelium lappaceum, Nigella glandulifera, Nigella sativa, Paeonia lactiflora, Paeonia rockii, Paeonia suffruticosa, Phyllanthus polyphyllus, Phytolacca dodecandra, Polyscias fulva, Rhabdodendron amazonicum, Rhabdodendron macrophyllum, Rosa laevigata, Rubia cordifolia, Salvia palaestina, Salvia sclareoides, Sapindus emarginatus, Sapindus saponaria, Serjania salzmanniana, Serjania triquetra, Spinacia oleracea, Stachyurus himalaicus, Stauntonia chinensis, Stauntonia hexaphylla, Stauntonia obovatifoliola, Swietenia mahogani, Syzygium sandwicense, Viburnum chingii, Viburnum erubescens and Zygophyllum obliquum. hederagenin was first documented in 2021 (PMID: 34273843). Based on a literature review a small amount of articles have been published on hederagenin (PMID: 34221083) (PMID: 34218602) (PMID: 34201300) (PMID: 34122600).
Structure
Thumb
Synonyms
ValueSource
Astrantiagenin eChEBI
CaulosapogeninChEBI
Hederagenic acidChEBI
HederagenolChEBI
HederagenateGenerator
Cyclocaric acid aPhytoBank, MeSH
(3beta,4alpha)-3,23-Dihydroxyolean-12-en-28-oic acidPhytoBank
(3β,4α)-3,23-Dihydroxyolean-12-en-28-oic acidPhytoBank
3beta,23-Dihydroxyolean-12-en-28-oic acidPhytoBank
3β,23-Dihydroxyolean-12-en-28-oic acidPhytoBank
HederageninPhytoBank
HederageninePhytoBank
Chemical FormulaC30H48O4
Average Mass472.7100 Da
Monoisotopic Mass472.35526 Da
IUPAC Name(4aS,6aS,6bR,8aR,9R,10S,12aR,12bR,14bS)-10-hydroxy-9-(hydroxymethyl)-2,2,6a,6b,9,12a-hexamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,12a,12b,13,14b-icosahydropicene-4a-carboxylic acid
Traditional Namehederagenin
CAS Registry NumberNot Available
SMILES
[H]OC(=O)[C@]12C([H])([H])C([H])([H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[C@@]1([H])C1=C([H])C([H])([H])[C@]3([H])[C@@]4(C([H])([H])[H])C([H])([H])C([H])([H])[C@]([H])(O[H])[C@@](C([H])([H])[H])(C([H])([H])O[H])[C@]4([H])C([H])([H])C([H])([H])[C@@]3(C([H])([H])[H])[C@]1(C([H])([H])[H])C([H])([H])C2([H])[H]
InChI Identifier
InChI=1S/C30H48O4/c1-25(2)13-15-30(24(33)34)16-14-28(5)19(20(30)17-25)7-8-22-26(3)11-10-23(32)27(4,18-31)21(26)9-12-29(22,28)6/h7,20-23,31-32H,8-18H2,1-6H3,(H,33,34)/t20-,21+,22+,23-,26-,27-,28+,29+,30-/m0/s1
InChI KeyPGOYMURMZNDHNS-MYPRUECHSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 300 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, C5D5N, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Abrus precatoriusLOTUS Database
Akebia quinataLOTUS Database
Akebia trifoliataLOTUS Database
Albizia schimperianaLOTUS Database
Anemoclema glaucifoliumLOTUS Database
Anemone cernuaLOTUS Database
Anisomeles Anisomeles indicaKNApSAcK Database
Atractylis carduusLOTUS Database
Bellis perennisLOTUS Database
Blighia sapidaLOTUS Database
Blighia sapida KoenigKNApSAcK Database
Caltha palustrisLOTUS Database
Campsis grandifloraLOTUS Database
Caryocar microcarpumLOTUS Database
Caulophyllum thalictroidesLOTUS Database
Cephalaria paphlagonicaLOTUS Database
Cephalaria transsylvanicaKNApSAcK Database
Chenopodium quinoaLOTUS Database
Clematis chinensisLOTUS Database
Clematis vitalbaLOTUS Database
Conandron ramondioides Sieb.et Zucc.Plant
Coussarea brevicaulisPlant
Cussonia holstiiLOTUS Database
Cydonia oblongaLOTUS Database
Dipsacus asperoidesLOTUS Database
Dipsacus inermisLOTUS Database
Dipsacus laciniatusLOTUS Database
Drypetes inaequalisLOTUS Database
Drypetes molunduana Pax and HoffmKNApSAcK Database
Elattostachys apetalaLOTUS Database
Eucalyptus perrinianaLOTUS Database
Eugenia sandwicensisKNApSAcK Database
Fagonia indicaLOTUS Database
Fatsia japonicaLOTUS Database
Ficaria verna Hudson-
Galeopsis angustifoliaLOTUS Database
Gardenia ternifoliaLOTUS Database
Hedera colchicaLOTUS Database
Hedera helixLOTUS Database
Hedera hibernicaLOTUS Database
Hedyotis lawsoniaeLOTUS Database
Heptapleurum rhododendrifoliumLOTUS Database
Holboellia latifoliaLOTUS Database
Hydrocotyle ranunculoidesLOTUS Database
Kalopanax septemlobusLOTUS Database
Lantana camaraLOTUS Database
Medicago arabicaPlant
Medicago arboreaPlant
Medicago hybridaPlant
Medicago lupulinaLOTUS Database
Medicago polymorphaPlant
Medicago sativaKNApSAcK Database
Medicago truncatulaKNApSAcK Database
Mimusops elengiLOTUS Database
Morinda citrifoliaLOTUS Database
Morinda citrifolia L.KNApSAcK Database
Morus albaLOTUS Database
Mosla chinensisLOTUS Database
Neolamarckia cadambaLOTUS Database
Nephelium lappaceumLOTUS Database
Nigella glanduliferaLOTUS Database
Nigella sativaJEOL database
    • Joshi, B. S., et al, Magn. Reson. Chem. 37, 295 (1999)
Paeonia lactifloraLOTUS Database
Paeonia rockiiLOTUS Database
Paeonia suffruticosaLOTUS Database
Phyllanthus polyphyllusLOTUS Database
Phytolacca dodecandraLOTUS Database
Polyscias fulvaLOTUS Database
Rhabdodendron amazonicumLOTUS Database
Rhabdodendron macrophyllumLOTUS Database
Rosa laevigataLOTUS Database
Rubia cordifoliaLOTUS Database
Salvia palaestinaLOTUS Database
Salvia sclareoidesLOTUS Database
Sapindus emarginatusLOTUS Database
Sapindus saponariaLOTUS Database
Serjania salzmannianaLOTUS Database
Serjania triquetraLOTUS Database
Spinacia oleraceaLOTUS Database
Stachyurus himalaicusLOTUS Database
Stauntonia chinensisLOTUS Database
Stauntonia hexahyllaKNApSAcK Database
Stauntonia hexaphyllaLOTUS Database
Stauntonia obovatifoliolaLOTUS Database
Swietenia mahagoniPlant
Swietenia mahoganiKNApSAcK Database
Syzygium sandwicenseLOTUS Database
Viburnum chingiiLOTUS Database
Viburnum erubescensLOTUS Database
Zygophyllum obliquumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Steroid
  • Cyclic alcohol
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point589.40 °C. @ 760.00 mm Hg (est)The Good Scents Company Information System
Water Solubility0.0034 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP7.410 (est)The Good Scents Company Information System
Predicted Properties
PropertyValueSource
logP6.17ALOGPS
logP5.31ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)4.74ChemAxon
pKa (Strongest Basic)-2.8ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area77.76 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity135.4 m³·mol⁻¹ChemAxon
Polarizability55.63 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00030459
Chemspider ID66038
KEGG Compound IDNot Available
BioCyc IDCPD-9481
BiGG IDNot Available
Wikipedia LinkHederagenin
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID69579
Good Scents IDrw1700321
References
General References
  1. Moffi Biang AE, Messi LM, Le Doux Kamto E, Simo LM, Lavedan P, Vedrenne M, Mbing JN, Pegnyemb DE, Haddad M, Note OP: Triterpenoid saponins and others glycosides from the stem barks of Pancovia turbinata Radlk. Carbohydr Res. 2021 Jul 10;508:108393. doi: 10.1016/j.carres.2021.108393. [PubMed:34273843 ]
  2. Tegen D, Dessie K, Damtie D: Candidate Anti-COVID-19 Medicinal Plants from Ethiopia: A Review of Plants Traditionally Used to Treat Viral Diseases. Evid Based Complement Alternat Med. 2021 Jun 4;2021:6622410. doi: 10.1155/2021/6622410. eCollection 2021. [PubMed:34221083 ]
  3. Zhang RH, Jin R, Deng H, Shen QK, Quan ZS, Jin CM: Evaluation of the anti-Toxoplasma gondii Activity of Hederagenin in vitro and in vivo. Korean J Parasitol. 2021 Jun;59(3):297-301. doi: 10.3347/kjp.2021.59.3.297. Epub 2021 Jun 21. [PubMed:34218602 ]
  4. Lourenco A, Marques AV, Gominho J: The Identification of New Triterpenoids in Eucalyptus globulus Wood. Molecules. 2021 Jun 8;26(12). pii: molecules26123495. doi: 10.3390/molecules26123495. [PubMed:34201300 ]
  5. Wang G, Wang J, Liu W, Nisar MF, El-Esawi MA, Wan C: Biological Activities and Chemistry of Triterpene Saponins from Medicago Species: An Update Review. Evid Based Complement Alternat Med. 2021 May 26;2021:6617916. doi: 10.1155/2021/6617916. eCollection 2021. [PubMed:34122600 ]
  6. Joshi, B. S., et al. (1999). Joshi, B. S., et al, Magn. Reson. Chem. 37, 295 (1999). Mag. Reson. Chem..