Np mrd loader

Record Information
Version2.0
Created at2021-06-19 21:23:04 UTC
Updated at2021-06-29 23:57:31 UTC
NP-MRD IDNP0029872
Secondary Accession NumbersNone
Natural Product Identification
Common Nameflakinin B
Provided ByJEOL DatabaseJEOL Logo
Description flakinin B is found in Dendrobium Snowflake `Red Star'. flakinin B was first documented in 2000 (Morita,H., et al.). Based on a literature review very few articles have been published on (1S,2S,3S,6R,7S,8R,11S)-7-hydroxy-5-(hydroxymethyl)-3-methoxy-6-methyl-11-(propan-2-yl)-9-oxatricyclo[6.2.1.0²,⁶]Undec-4-en-10-one.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC16H24O5
Average Mass296.3630 Da
Monoisotopic Mass296.16237 Da
IUPAC Name(1S,2S,3S,6R,7S,8R,11S)-7-hydroxy-5-(hydroxymethyl)-3-methoxy-6-methyl-11-(propan-2-yl)-9-oxatricyclo[6.2.1.0^{2,6}]undec-4-en-10-one
Traditional Name(1S,2S,3S,6R,7S,8R,11S)-7-hydroxy-5-(hydroxymethyl)-11-isopropyl-3-methoxy-6-methyl-9-oxatricyclo[6.2.1.0^{2,6}]undec-4-en-10-one
CAS Registry NumberNot Available
SMILES
[H]OC([H])([H])C1=C([H])[C@]([H])(OC([H])([H])[H])[C@@]2([H])[C@@]3([H])C(=O)O[C@]([H])([C@@]3([H])C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]([H])(O[H])[C@@]12C([H])([H])[H]
InChI Identifier
InChI=1S/C16H24O5/c1-7(2)10-11-12-9(20-4)5-8(6-17)16(12,3)14(18)13(10)21-15(11)19/h5,7,9-14,17-18H,6H2,1-4H3/t9-,10-,11-,12-,13+,14+,16-/m0/s1
InChI KeyVVDXSHUFKXYFIE-RDYONIRKSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 600 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CDCl3-CD3OD (9:1), simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Dendrobium Snowflake `Red Star'JEOL database
    • Morita,H., et al, Tetrahedron 56, 5801 (2000)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as terpene lactones. These are prenol lipids containing a lactone ring.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentTerpene lactones
Alternative Parents
Substituents
  • Terpene lactone
  • Sesquiterpenoid
  • Caprolactone
  • Oxepane
  • Gamma butyrolactone
  • Cyclic alcohol
  • Tetrahydrofuran
  • Carboxylic acid ester
  • Secondary alcohol
  • Lactone
  • Organoheterocyclic compound
  • Carboxylic acid derivative
  • Oxacycle
  • Dialkyl ether
  • Ether
  • Monocarboxylic acid or derivatives
  • Carbonyl group
  • Alcohol
  • Organic oxide
  • Primary alcohol
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.84ALOGPS
logP0.29ChemAxon
logS-1.7ALOGPS
pKa (Strongest Acidic)13.63ChemAxon
pKa (Strongest Basic)-2.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area75.99 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity76.59 m³·mol⁻¹ChemAxon
Polarizability30.85 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8931669
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10756348
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Morita,H., et al. (2000). Morita,H., et al, Tetrahedron 56, 5801 (2000). Tetrahedron.