NP-MRD: Showing NP-Card for norcaesalpinin D (NP0028131)

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Record Information

Version

2.0

Created at

2021-06-19 20:06:05 UTC

Updated at

2021-06-29 23:54:42 UTC

NP-MRD ID

NP0028131

Secondary Accession Numbers

None

Natural Product Identification

Common Name

norcaesalpinin D

Provided By

JEOL Database JEOL Logo

Description

Norcaesalpinin D is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. norcaesalpinin D is found in Caesalpinia crista. norcaesalpinin D was first documented in 2005 (Linn, T. Z., et al.). Based on a literature review very few articles have been published on norcaesalpinin D.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192122063D          

 66 69  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652306192122063D          

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M  END
> <DATABASE_ID>
NP0028131

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]12C([H])([H])C([H])([H])[C@@]3([H])C(=O)C4=C(OC([H])=C4[H])C([H])([H])[C@]3([H])[C@@]1(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])C2(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C25H32O9/c1-12(26)32-20-21(33-13(2)27)23(4,5)25(30)9-7-15-17(24(25,6)22(20)34-14(3)28)11-18-16(19(15)29)8-10-31-18/h8,10,15,17,20-22,30H,7,9,11H2,1-6H3/t15-,17+,20+,21-,22+,24+,25-/m1/s1

> <INCHI_KEY>
SJZIFWGVHGVKAH-AVZLBZSXSA-N

> <FORMULA>
C25H32O9

> <MOLECULAR_WEIGHT>
476.522

> <EXACT_MASS>
476.20463261

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
66

> <JCHEM_AVERAGE_POLARIZABILITY>
48.7313509445309

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2S,3R,4S,5S,7R,10R)-4,5-bis(acetyloxy)-7-hydroxy-2,6,6-trimethyl-11-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-3-yl acetate

> <ALOGPS_LOGP>
2.39

> <JCHEM_LOGP>
1.4227167156666667

> <ALOGPS_LOGS>
-3.79

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.084704707822997

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.863655793389789

> <JCHEM_PKA_STRONGEST_BASIC>
-3.0436158647162297

> <JCHEM_POLAR_SURFACE_AREA>
129.34

> <JCHEM_REFRACTIVITY>
116.3034

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.77e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,3R,4S,5S,7R,10R)-4,5-bis(acetyloxy)-7-hydroxy-2,6,6-trimethyl-11-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-3-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 66 69  0  0  0  0  0  0  0  0999 V2000
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M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0      -2.125  -4.053  -4.309  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.014  -3.303  -3.642  0.00  0.00           C+0
HETATM    3  O   UNK     0       0.174  -3.433  -3.906  0.00  0.00           O+0
HETATM    4  O   UNK     0      -1.517  -2.435  -2.720  0.00  0.00           O+0
HETATM    5  C   UNK     0      -0.534  -1.668  -1.990  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.185  -0.345  -1.534  0.00  0.00           C+0
HETATM    7  O   UNK     0      -2.356  -0.645  -0.730  0.00  0.00           O+0
HETATM    8  C   UNK     0      -3.567  -0.530  -1.343  0.00  0.00           C+0
HETATM    9  C   UNK     0      -4.660  -0.895  -0.386  0.00  0.00           C+0
HETATM   10  O   UNK     0      -3.754  -0.201  -2.505  0.00  0.00           O+0
HETATM   11  C   UNK     0      -0.207   0.555  -0.706  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.793   1.237  -1.670  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.037   1.732  -0.103  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.476  -0.295   0.451  0.00  0.00           C+0
HETATM   15  O   UNK     0      -0.569  -0.569   1.414  0.00  0.00           O+0
HETATM   16  C   UNK     0       1.524   0.505   1.261  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.002  -0.240   2.510  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.490  -1.668   2.242  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.786  -2.369   3.594  0.00  0.00           C+0
HETATM   20  O   UNK     0       3.115  -1.753   4.604  0.00  0.00           O+0
HETATM   21  C   UNK     0       2.732  -3.816   3.579  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.988  -4.806   4.555  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.761  -6.017   3.936  0.00  0.00           C+0
HETATM   24  O   UNK     0       2.379  -5.834   2.640  0.00  0.00           O+0
HETATM   25  C   UNK     0       2.366  -4.495   2.443  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.985  -3.936   1.128  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.479  -2.479   1.355  0.00  0.00           C+0
HETATM   28  C   UNK     0       1.093  -1.699   0.021  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.373  -1.571  -0.853  0.00  0.00           C+0
HETATM   30  C   UNK     0       0.033  -2.502  -0.811  0.00  0.00           C+0
HETATM   31  O   UNK     0      -1.041  -2.902   0.081  0.00  0.00           O+0
HETATM   32  C   UNK     0      -1.615  -4.118  -0.129  0.00  0.00           C+0
HETATM   33  C   UNK     0      -2.633  -4.391   0.935  0.00  0.00           C+0
HETATM   34  O   UNK     0      -1.329  -4.897  -1.025  0.00  0.00           O+0
HETATM   35  H   UNK     0      -2.753  -4.537  -3.556  0.00  0.00           H+0
HETATM   36  H   UNK     0      -2.717  -3.368  -4.920  0.00  0.00           H+0
HETATM   37  H   UNK     0      -1.702  -4.829  -4.952  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.272  -1.407  -2.683  0.00  0.00           H+0
HETATM   39  H   UNK     0      -1.493   0.213  -2.428  0.00  0.00           H+0
HETATM   40  H   UNK     0      -4.481  -0.427   0.586  0.00  0.00           H+0
HETATM   41  H   UNK     0      -4.712  -1.981  -0.284  0.00  0.00           H+0
HETATM   42  H   UNK     0      -5.615  -0.522  -0.769  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.543   1.826  -1.134  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.310   0.547  -2.332  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.267   1.935  -2.335  0.00  0.00           H+0
HETATM   46  H   UNK     0      -1.608   2.244  -0.887  0.00  0.00           H+0
HETATM   47  H   UNK     0      -0.391   2.484   0.363  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.758   1.403   0.652  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.282  -1.064   0.966  0.00  0.00           H+0
HETATM   50  H   UNK     0       2.389   0.768   0.645  0.00  0.00           H+0
HETATM   51  H   UNK     0       1.094   1.450   1.611  0.00  0.00           H+0
HETATM   52  H   UNK     0       2.806   0.342   2.978  0.00  0.00           H+0
HETATM   53  H   UNK     0       1.190  -0.264   3.250  0.00  0.00           H+0
HETATM   54  H   UNK     0       3.458  -1.618   1.726  0.00  0.00           H+0
HETATM   55  H   UNK     0       3.299  -4.654   5.580  0.00  0.00           H+0
HETATM   56  H   UNK     0       2.823  -7.047   4.261  0.00  0.00           H+0
HETATM   57  H   UNK     0       2.865  -3.962   0.480  0.00  0.00           H+0
HETATM   58  H   UNK     0       1.207  -4.557   0.675  0.00  0.00           H+0
HETATM   59  H   UNK     0       0.567  -2.586   1.963  0.00  0.00           H+0
HETATM   60  H   UNK     0       3.165  -0.995  -0.371  0.00  0.00           H+0
HETATM   61  H   UNK     0       2.793  -2.555  -1.087  0.00  0.00           H+0
HETATM   62  H   UNK     0       2.195  -1.115  -1.822  0.00  0.00           H+0
HETATM   63  H   UNK     0       0.510  -3.404  -1.213  0.00  0.00           H+0
HETATM   64  H   UNK     0      -3.282  -3.522   1.066  0.00  0.00           H+0
HETATM   65  H   UNK     0      -3.256  -5.237   0.632  0.00  0.00           H+0
HETATM   66  H   UNK     0      -2.127  -4.632   1.873  0.00  0.00           H+0
CONECT    1    2   35   36   37                                             
CONECT    2    4    1    3                                                  
CONECT    3    2                                                            
CONECT    4    5    2                                                       
CONECT    5    4    6   30   38                                             
CONECT    6    7    5   11   39                                             
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8   40   41   42                                             
CONECT   10    8                                                            
CONECT   11   12   13   14    6                                             
CONECT   12   11   43   44   45                                             
CONECT   13   11   46   47   48                                             
CONECT   14   16   15   11   28                                             
CONECT   15   14   49                                                       
CONECT   16   14   17   50   51                                             
CONECT   17   16   18   52   53                                             
CONECT   18   17   54   27   19                                             
CONECT   19   20   21   18                                                  
CONECT   20   19                                                            
CONECT   21   22   19   25                                                  
CONECT   22   21   23   55                                                  
CONECT   23   22   24   56                                                  
CONECT   24   23   25                                                       
CONECT   25   24   21   26                                                  
CONECT   26   27   25   57   58                                             
CONECT   27   28   59   18   26                                             
CONECT   28   27   30   14   29                                             
CONECT   29   28   60   61   62                                             
CONECT   30   28   31    5   63                                             
CONECT   31   32   30                                                       
CONECT   32   31   34   33                                                  
CONECT   33   32   64   65   66                                             
CONECT   34   32                                                            
CONECT   35    1                                                            
CONECT   36    1                                                            
CONECT   37    1                                                            
CONECT   38    5                                                            
CONECT   39    6                                                            
CONECT   40    9                                                            
CONECT   41    9                                                            
CONECT   42    9                                                            
CONECT   43   12                                                            
CONECT   44   12                                                            
CONECT   45   12                                                            
CONECT   46   13                                                            
CONECT   47   13                                                            
CONECT   48   13                                                            
CONECT   49   15                                                            
CONECT   50   16                                                            
CONECT   51   16                                                            
CONECT   52   17                                                            
CONECT   53   17                                                            
CONECT   54   18                                                            
CONECT   55   22                                                            
CONECT   56   23                                                            
CONECT   57   26                                                            
CONECT   58   26                                                            
CONECT   59   27                                                            
CONECT   60   29                                                            
CONECT   61   29                                                            
CONECT   62   29                                                            
CONECT   63   30                                                            
CONECT   64   33                                                            
CONECT   65   33                                                            
CONECT   66   33                                                            
MASTER        0    0    0    0    0    0    0    0   66    0  138    0
END

RDKit          3D

66 69  0  0  0  0  0  0  0  0999 V2000
   -2.1247   -4.0531   -4.3085 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0136   -3.3027   -3.6424 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1740   -3.4325   -3.9059 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5170   -2.4352   -2.7203 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5338   -1.6675   -1.9901 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.1850   -0.3447   -1.5340 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3556   -0.6453   -0.7296 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5673   -0.5302   -1.3430 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6604   -0.8953   -0.3863 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7542   -0.2011   -2.5048 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2065    0.5554   -0.7056 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7929    1.2370   -1.6701 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0368    1.7320   -0.1027 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4764   -0.2949    0.4505 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5692   -0.5692    1.4144 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5235    0.5051    1.2606 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0018   -0.2398    2.5104 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4902   -1.6678    2.2421 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7857   -2.3692    3.5940 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1146   -1.7531    4.6037 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7319   -3.8162    3.5787 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9877   -4.8058    4.5554 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7610   -6.0173    3.9361 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3792   -5.8340    2.6403 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3665   -4.4955    2.4432 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9849   -3.9364    1.1284 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4787   -2.4787    1.3548 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.0934   -1.6988    0.0206 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3732   -1.5713   -0.8526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0325   -2.5021   -0.8109 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0409   -2.9017    0.0812 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6152   -4.1179   -0.1289 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6330   -4.3908    0.9353 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3288   -4.8967   -1.0252 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7527   -4.5367   -3.5560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7173   -3.3683   -4.9197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7018   -4.8294   -4.9524 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2720   -1.4071   -2.6831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4934    0.2127   -2.4280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4813   -0.4272    0.5855 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7116   -1.9812   -0.2841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6147   -0.5222   -0.7687 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5432    1.8258   -1.1344 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3095    0.5465   -2.3321 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2668    1.9347   -2.3347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6077    2.2445   -0.8867 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3912    2.4837    0.3630 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7579    1.4034    0.6521 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2821   -1.0644    0.9656 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3891    0.7682    0.6452 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0941    1.4503    1.6110 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8063    0.3424    2.9780 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1898   -0.2635    3.2496 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4580   -1.6176    1.7263 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2987   -4.6542    5.5799 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8228   -7.0469    4.2609 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8647   -3.9619    0.4796 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2071   -4.5567    0.6747 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5673   -2.5859    1.9626 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1654   -0.9946   -0.3705 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7927   -2.5545   -1.0873 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1952   -1.1152   -1.8221 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5103   -3.4035   -1.2130 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2824   -3.5217    1.0660 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2561   -5.2369    0.6320 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1270   -4.6319    1.8731 H   0  0  0  0  0  0  0  0  0  0  0  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  1  0
 28 27  1  0
 19 20  2  0
  6  7  1  0
 11 12  1  6
 14 16  1  0
 14 15  1  1
 16 17  1  0
 27 59  1  1
 21 19  1  0
 11 13  1  0
 17 18  1  0
 18 54  1  6
 27 18  1  0
  7  8  1  0
 11 14  1  0
  8  9  1  0
 28 30  1  0
  8 10  2  0
 28 14  1  0
  5  4  1  0
 27 26  1  0
 18 19  1  0
 31 32  1  0
 25 21  2  0
 32 34  2  0
 32 33  1  0
 30 31  1  0
 25 26  1  0
  4  2  1  0
  5  6  1  0
  2  1  1  0
  5 30  1  0
  2  3  2  0
  6 11  1  0
 28 29  1  6
  5 38  1  6
  6 39  1  6
 30 63  1  6
 16 50  1  0
 16 51  1  0
 17 52  1  0
 17 53  1  0
 26 57  1  0
 26 58  1  0
 22 55  1  0
 23 56  1  0
 12 43  1  0
 12 44  1  0
 12 45  1  0
 15 49  1  0
 13 46  1  0
 13 47  1  0
 13 48  1  0
  9 40  1  0
  9 41  1  0
  9 42  1  0
 33 64  1  0
 33 65  1  0
 33 66  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
 29 60  1  0
 29 61  1  0
 29 62  1  0
M  END

View in JSmol View DFT Assignments 3D Conformers

Synonyms

Not Available

Chemical Formula

C₂₅H₃₂O₉

Average Mass

476.5220 Da

Monoisotopic Mass

476.20463 Da

IUPAC Name

(1S,2S,3R,4S,5S,7R,10R)-4,5-bis(acetyloxy)-7-hydroxy-2,6,6-trimethyl-11-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-3-yl acetate

Traditional Name

(1S,2S,3R,4S,5S,7R,10R)-4,5-bis(acetyloxy)-7-hydroxy-2,6,6-trimethyl-11-oxo-15-oxatetracyclo[8.7.0.0^{2,7}.0^{12,16}]heptadeca-12(16),13-dien-3-yl acetate

CAS Registry Number

Not Available

SMILES

[H]O[C@@]12C([H])([H])C([H])([H])[C@@]3([H])C(=O)C4=C(OC([H])=C4[H])C([H])([H])[C@]3([H])[C@@]1(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])C2(C([H])([H])[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C25H32O9/c1-12(26)32-20-21(33-13(2)27)23(4,5)25(30)9-7-15-17(24(25,6)22(20)34-14(3)28)11-18-16(19(15)29)8-10-31-18/h8,10,15,17,20-22,30H,7,9,11H2,1-6H3/t15-,17+,20+,21-,22+,24+,25-/m1/s1

InChI Key

SJZIFWGVHGVKAH-AVZLBZSXSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 175 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 225 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 250 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, chcl3, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Caesalpinia crista	KNApSAcK Database	22123792
Guilandina crista	JEOL database	Linn, T. Z., et al, J. Nat. Prod. 68, 706 (2005)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.39	ALOGPS
logP	1.42	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	13.86	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	129.34 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	116.3 m³·mol⁻¹	ChemAxon
Polarizability	48.73 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00042791

Chemspider ID

9423583

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

65544

Good Scents ID

Not Available

References

General References

Linn, T. Z., et al. (2005). Linn, T. Z., et al, J. Nat. Prod. 68, 706 (2005). J. Nat. Prod..

Showing NP-Card for norcaesalpinin D (NP0028131)

MOL for NP0028131 (norcaesalpinin D)

3D MOL for NP0028131 (norcaesalpinin D)

3D SDF for NP0028131 (norcaesalpinin D)

3D-SDF for NP0028131 (norcaesalpinin D)

PDB for NP0028131 (norcaesalpinin D)

3D PDB for NP0028131 (norcaesalpinin D)

SMILES for NP0028131 (norcaesalpinin D)

INCHI for NP0028131 (norcaesalpinin D)

Structure for NP0028131 (norcaesalpinin D)

3D Structure for NP0028131 (norcaesalpinin D)