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Record Information
Version2.0
Created at2021-06-19 18:55:10 UTC
Updated at2021-06-29 23:53:14 UTC
NP-MRD IDNP0027237
Secondary Accession NumbersNone
Natural Product Identification
Common Namekendarimide A
Provided ByJEOL DatabaseJEOL Logo
Description kendarimide A is found in Haliclona sp. kendarimide A was first documented in 2004 (Aoki, S., et al.). Based on a literature review very few articles have been published on Kendarimide A.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC83H134N14O15S2
Average Mass1632.1900 Da
Monoisotopic Mass1630.95945 Da
IUPAC Name(4R,7R)-7-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S,3S)-N,3-dimethyl-2-[(2S)-N-methyl-2-{[(2S)-1-methyl-5-oxopyrrolidin-2-yl]formamido}-3-phenylpropanamido]pentanamido]-N-methylpropanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N-methylpropanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N-[(2S)-1-hydroxy-3-phenylpropan-2-yl]-5-methyl-6-oxo-1,2,5-dithiazocane-4-carboxamide
Traditional Name(4R,7R)-7-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S)-2-[(2S,3S)-N,3-dimethyl-2-[(2S)-N-methyl-2-{[(2S)-1-methyl-5-oxopyrrolidin-2-yl]formamido}-3-phenylpropanamido]pentanamido]-N-methylpropanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N-methylpropanamido]-N,3-dimethylbutanamido]-N,3-dimethylbutanamido]-N-[(2S)-1-hydroxy-3-phenylpropan-2-yl]-5-methyl-6-oxo-1,2,5-dithiazocane-4-carboxamide
CAS Registry NumberNot Available
SMILES
[H]OC([H])([H])[C@@]([H])(N([H])C(=O)[C@@]1([H])N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N(C(=O)[C@@]([H])(N([H])C(=O)[C@@]2([H])N(C(=O)C([H])([H])C2([H])[H])C([H])([H])[H])C([H])([H])C2=C([H])C([H])=C([H])C([H])=C2[H])C([H])([H])[H])[C@@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])SSC1([H])[H])C([H])([H])[H])C([H])([H])C1=C([H])C([H])=C([H])C([H])=C1[H]
InChI Identifier
InChI=1S/C83H134N14O15S2/c1-29-53(14)70(97(28)75(104)59(43-57-38-34-31-35-39-57)85-71(100)60-40-41-63(99)88(60)19)83(112)87(18)55(16)74(103)92(23)67(50(8)9)80(109)95(26)69(52(12)13)82(111)96(27)68(51(10)11)81(110)93(24)64(47(2)3)77(106)86(17)54(15)73(102)91(22)66(49(6)7)79(108)94(25)65(48(4)5)78(107)90(21)62-46-114-113-45-61(89(20)76(62)105)72(101)84-58(44-98)42-56-36-32-30-33-37-56/h30-39,47-55,58-62,64-70,98H,29,40-46H2,1-28H3,(H,84,101)(H,85,100)/t53-,54-,55-,58-,59-,60-,61-,62-,64-,65-,66-,67-,68-,69-,70-/m0/s1
InChI KeyVAUZQYYLEOVLHG-HZGBYFRMSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CDCl3, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Haliclona sp.JEOL database
    • Aoki, S., et al, Tetrahedron 60, 7053 (2004)
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.25ChemAxon
pKa (Strongest Acidic)12.39ChemAxon
pKa (Strongest Basic)-1.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count15ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area322.15 ŲChemAxon
Rotatable Bond Count37ChemAxon
Refractivity442.53 m³·mol⁻¹ChemAxon
Polarizability177.43 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID29213449
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound102354282
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Aoki, S., et al. (2004). Aoki, S., et al, Tetrahedron 60, 7053 (2004). Tetrahedron.