Np mrd loader

Record Information
Version2.0
Created at2021-06-19 18:20:32 UTC
Updated at2021-06-29 23:52:02 UTC
NP-MRD IDNP0026477
Secondary Accession NumbersNone
Natural Product Identification
Common Name32,33-dihydro-6-hydroxymanzamine A-35-one
Provided ByJEOL DatabaseJEOL Logo
Description 32,33-dihydro-6-hydroxymanzamine A-35-one is found in Indonesian sponge. 32,33-dihydro-6-hydroxymanzamine A-35-one was first documented in 2003 (Rao, K. V., et al.). Based on a literature review very few articles have been published on CHEMBL442668.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC36H44N4O3
Average Mass580.7730 Da
Monoisotopic Mass580.34134 Da
IUPAC Name(1S,2S,4S,12R,13S,16Z,22R)-13-hydroxy-25-{6-hydroxy-9H-pyrido[3,4-b]indol-1-yl}-11,22-diazapentacyclo[11.11.2.1^{2,22}.0^{2,12}.0^{4,11}]heptacosa-16,25-dien-3-one
Traditional Name(1S,2S,4S,12R,13S,16Z,22R)-13-hydroxy-25-{6-hydroxy-9H-pyrido[3,4-b]indol-1-yl}-11,22-diazapentacyclo[11.11.2.1^{2,22}.0^{2,12}.0^{4,11}]heptacosa-16,25-dien-3-one
CAS Registry NumberNot Available
SMILES
[H]OC1=C([H])C2=C(N([H])C3=C2C([H])=C([H])N=C3C2=C([H])[C@@]3(O[H])C([H])([H])C([H])([H])\C([H])=C([H])/C([H])([H])C([H])([H])C([H])([H])C([H])([H])[N@@]4C([H])([H])C([H])([H])[C@]2([H])[C@]2(C(=O)[C@@]5([H])N(C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C5([H])[H])[C@@]32[H])C4([H])[H])C([H])=C1[H]
InChI Identifier
InChI=1S/C36H44N4O3/c41-24-12-13-29-26(21-24)25-14-17-37-31(32(25)38-29)27-22-35(43)16-8-4-1-2-5-9-18-39-20-15-28(27)36(23-39)33(42)30-11-7-3-6-10-19-40(30)34(35)36/h1,4,12-14,17,21-22,28,30,34,38,41,43H,2-3,5-11,15-16,18-20,23H2/b4-1-/t28-,30-,34-,35-,36-/m0/s1
InChI KeyVBDZCMDPJQQKOS-GMGIBDNWSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 400 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 500 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CH3OD, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Indonesian spongeJEOL database
    • Rao, K. V., et al, J. Nat. Prod. 66, 823 (2003)
Chemical Taxonomy
Description Belongs to the class of organic compounds known as harmala alkaloids. Harmala alkaloids are compounds with a structure based on harmaline, harmine, harmalol, harman or a derivative of those parents. These parents are beta-carbolines, consisting of a pyrimidine fused to the pyrrole moiety of an indole to form a pyrido[3,4-b]indole.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassHarmala alkaloids
Sub ClassNot Available
Direct ParentHarmala alkaloids
Alternative Parents
Substituents
  • Harman
  • Beta-carboline
  • Pyridoindole
  • Azaspirodecane
  • Hydroxyindole
  • Indole
  • Indole or derivatives
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Piperidine
  • Benzenoid
  • N-alkylpyrrolidine
  • Pyridine
  • Pyrrolidone
  • 3-pyrrolidone
  • Heteroaromatic compound
  • Pyrrole
  • Pyrrolidine
  • Tertiary alcohol
  • Tertiary aliphatic amine
  • Ketone
  • Tertiary amine
  • Organoheterocyclic compound
  • Azacycle
  • Organooxygen compound
  • Organonitrogen compound
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Carbonyl group
  • Organic oxygen compound
  • Amine
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.73ALOGPS
logP4.85ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)9.75ChemAxon
pKa (Strongest Basic)9.15ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area92.69 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity171.11 m³·mol⁻¹ChemAxon
Polarizability66.5 ųChemAxon
Number of Rings8ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID23339589
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound44566806
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Rao, K. V., et al. (2003). Rao, K. V., et al, J. Nat. Prod. 66, 823 (2003). J. Nat. Prod..