NP-MRD: Showing NP-Card for Tupichigenin F (NP0026355)

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Record Information

Version

2.0

Created at

2021-06-19 18:15:07 UTC

Updated at

2021-06-29 23:51:50 UTC

NP-MRD ID

NP0026355

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Tupichigenin F

Provided By

JEOL Database JEOL Logo

Description

Tupichigenin F is found in Tupistra chinensis. Tupichigenin F was first documented in 2003 (Pan, W.-B., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192120153D          

 77 82  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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 14 13  1  0
 13 12  1  0
 26 12  1  0
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 21 59  1  0
M  END


  Mrv1652306192120153D          

 77 82  0  0  0  0            999 V2000
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   -0.8050    0.8587    5.7787 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2524    1.3151    5.6329 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6588    1.3948    4.1593 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4688    1.6696    3.2277 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4870    2.4585    3.8949 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1268    1.8035    5.0070 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9025    0.4289    2.7821 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2049    0.6873    1.5610 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5095   -0.4105    0.5438 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4484    0.2381   -0.4876 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4669   -0.4332   -1.8814 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.8779   -1.9078   -1.7747 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8972   -2.6017   -3.1302 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5743   -2.4656   -3.9078 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8222   -3.0666   -5.1868 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5346   -3.2879   -3.1973 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8914   -3.1812   -3.8855 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8212   -3.8778   -5.1360 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3124   -1.7184   -4.0936 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5022   -1.7025   -4.9018 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2293   -0.8749   -4.7978 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2174   -1.3086   -6.1724 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1748   -0.9540   -4.0995 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2062   -0.2358   -5.0186 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1401   -0.2496   -2.6738 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2336    1.2477   -2.7231 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.2999    1.8770   -1.3298 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0075    1.7199   -0.5120 C   0  0  1  0  0  0  0  0  0  0  0  0
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   -1.8928    2.3485    1.9153 C   0  0  2  0  0  0  0  0  0  0  0  0
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    0.6474    0.3990    7.3243 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.4182    2.1803    4.0738 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.6906   -3.7378   -5.5589 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5673   -1.2721   -3.1270 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1699   -1.6088   -5.8208 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5783    0.1606   -4.8531 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5392   -0.8023   -6.6519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3931   -0.7883   -5.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1811   -0.1068   -4.5430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8510    0.7589   -5.3087 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6505   -0.7370   -2.0930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4773    1.8052   -3.3404 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2171    1.3810   -3.1839 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1465    1.4280   -0.7946 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5472    2.9418   -1.4305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2853    2.3998   -2.1650 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0498    2.5215   -0.5952 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.0602    2.7876    1.0802 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8032    1.8576    1.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9262    4.0492    2.7925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4911    4.2766    1.1014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2486    4.3911    2.3474 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 14  1  0  0  0  0
 14 13  1  0  0  0  0
 13 12  1  0  0  0  0
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 29 11  1  0  0  0  0
 31 73  1  6  0  0  0
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 11 10  1  0  0  0  0
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 10  9  1  0  0  0  0
  3  2  1  0  0  0  0
 31 29  1  0  0  0  0
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 31  9  1  0  0  0  0
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  3 38  1  0  0  0  0
  3 39  1  0  0  0  0
  2 37  1  6  0  0  0
  7 42  1  0  0  0  0
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  1 34  1  0  0  0  0
  1 35  1  0  0  0  0
  1 36  1  0  0  0  0
 21 59  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0026355

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]1([H])C([H])([H])[C@@]2(O[H])C([H])([H])C([H])([H])[C@@]3([H])[C@@]4([H])C([H])([H])[C@]5([H])O[C@@]6(OC([H])([H])[C@@]([H])(C([H])([H])[H])C([H])([H])C6([H])[H])[C@@]([H])(C([H])([H])[H])[C@]5([H])[C@@]4(C([H])([H])[H])C([H])([H])C([H])([H])[C@]3([H])[C@@]2(C([H])([H])[H])[C@]([H])(O[H])[C@]1([H])O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C27H44O6/c1-14-5-10-27(32-13-14)15(2)21-20(33-27)11-18-16-6-9-26(31)12-19(28)22(29)23(30)25(26,4)17(16)7-8-24(18,21)3/h14-23,28-31H,5-13H2,1-4H3/t14-,15-,16+,17-,18+,19+,20-,21-,22+,23+,24-,25-,26-,27+/m0/s1

> <INCHI_KEY>
OJOIREGWGDMNGQ-XNNUVBAISA-N

> <FORMULA>
C27H44O6

> <MOLECULAR_WEIGHT>
464.643

> <EXACT_MASS>
464.313789137

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
77

> <JCHEM_AVERAGE_POLARIZABILITY>
52.53538320847241

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1'S,2R,2'R,4'S,5S,7'S,8'R,9'S,12'S,13'S,14'S,15'R,16'R,18'S)-5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane]-14',15',16',18'-tetrol

> <ALOGPS_LOGP>
1.46

> <JCHEM_LOGP>
2.1068914103333314

> <ALOGPS_LOGS>
-3.81

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.978452285555296

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.988545688947411

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1537909808306672

> <JCHEM_POLAR_SURFACE_AREA>
99.38000000000001

> <JCHEM_REFRACTIVITY>
123.4694

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.20e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1'S,2R,2'R,4'S,5S,7'S,8'R,9'S,12'S,13'S,14'S,15'R,16'R,18'S)-5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane]-14',15',16',18'-tetrol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 77 82  0  0  0  0  0  0  0  0999 V2000
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   -1.4688    1.6696    3.2277 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4870    2.4585    3.8949 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1268    1.8035    5.0070 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.9736   -1.2879    1.0068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4682    0.1784   -0.0798 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2635    0.0720   -2.4414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2071   -2.4491   -1.0995 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8774   -1.9775   -1.3276 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7277   -2.2087   -3.7307 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1384   -3.6640   -2.9906 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0479   -3.3235   -5.5667 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2361   -4.3447   -3.1893 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6538   -2.9762   -2.1552 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6516   -3.7016   -3.2916 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6906   -3.7378   -5.5589 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.1699   -1.6088   -5.8208 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5783    0.1606   -4.8531 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5392   -0.8023   -6.6519 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3931   -0.7883   -5.9451 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1811   -0.1068   -4.5430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8510    0.7589   -5.3087 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6505   -0.7370   -2.0930 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4773    1.8052   -3.3404 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2171    1.3810   -3.1839 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1465    1.4280   -0.7946 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5472    2.9418   -1.4305 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.7911    3.6799   -1.0598 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0602    2.7876    1.0802 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8032    1.8576    1.5494 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9262    4.0492    2.7925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4911    4.2766    1.1014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2486    4.3911    2.3474 H   0  0  0  0  0  0  0  0  0  0  0  0
 15 14  1  0
 14 13  1  0
 13 12  1  0
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  9  8  1  0
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  5  6  1  1
 18 17  1  0
  5  4  1  0
 11 10  1  0
  4  3  1  0
 10  9  1  0
  3  2  1  0
 31 29  1  0
  6  7  1  0
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 31  9  1  0
  2  1  1  0
 24 26  1  0
 20 21  1  0
  5  8  1  0
 20 58  1  1
 18 56  1  1
 17 54  1  0
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 32 74  1  6
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 16 53  1  0
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 30 70  1  0
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 33 75  1  0
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  4 40  1  0
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  3 38  1  0
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  2 37  1  6
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  1 34  1  0
  1 35  1  0
  1 36  1  0
 21 59  1  0
M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0      -0.389   0.744   7.242  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.805   0.859   5.779  0.00  0.00           C+0
HETATM    3  C   UNK     0      -2.252   1.315   5.633  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.659   1.395   4.159  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.469   1.670   3.228  0.00  0.00           C+0
HETATM    6  O   UNK     0      -0.487   2.458   3.895  0.00  0.00           O+0
HETATM    7  C   UNK     0       0.127   1.804   5.007  0.00  0.00           C+0
HETATM    8  O   UNK     0      -0.903   0.429   2.782  0.00  0.00           O+0
HETATM    9  C   UNK     0      -0.205   0.687   1.561  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.509  -0.411   0.544  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.448   0.238  -0.488  0.00  0.00           C+0
HETATM   12  C   UNK     0      -1.467  -0.433  -1.881  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.878  -1.908  -1.775  0.00  0.00           C+0
HETATM   14  C   UNK     0      -1.897  -2.602  -3.130  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.574  -2.466  -3.908  0.00  0.00           C+0
HETATM   16  O   UNK     0      -0.822  -3.067  -5.187  0.00  0.00           O+0
HETATM   17  C   UNK     0       0.535  -3.288  -3.197  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.891  -3.181  -3.886  0.00  0.00           C+0
HETATM   19  O   UNK     0       1.821  -3.878  -5.136  0.00  0.00           O+0
HETATM   20  C   UNK     0       2.312  -1.718  -4.094  0.00  0.00           C+0
HETATM   21  O   UNK     0       3.502  -1.702  -4.902  0.00  0.00           O+0
HETATM   22  C   UNK     0       1.229  -0.875  -4.798  0.00  0.00           C+0
HETATM   23  O   UNK     0       1.217  -1.309  -6.172  0.00  0.00           O+0
HETATM   24  C   UNK     0      -0.175  -0.954  -4.099  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.206  -0.236  -5.019  0.00  0.00           C+0
HETATM   26  C   UNK     0      -0.140  -0.250  -2.674  0.00  0.00           C+0
HETATM   27  C   UNK     0       0.234   1.248  -2.723  0.00  0.00           C+0
HETATM   28  C   UNK     0       0.300   1.877  -1.330  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.008   1.720  -0.512  0.00  0.00           C+0
HETATM   30  C   UNK     0      -2.092   2.628  -1.113  0.00  0.00           C+0
HETATM   31  C   UNK     0      -0.716   2.017   0.986  0.00  0.00           C+0
HETATM   32  C   UNK     0      -1.893   2.349   1.915  0.00  0.00           C+0
HETATM   33  C   UNK     0      -2.151   3.848   2.047  0.00  0.00           C+0
HETATM   34  H   UNK     0       0.647   0.399   7.324  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.468   1.708   7.755  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.025   0.027   7.771  0.00  0.00           H+0
HETATM   37  H   UNK     0      -0.722  -0.144   5.339  0.00  0.00           H+0
HETATM   38  H   UNK     0      -2.934   0.643   6.168  0.00  0.00           H+0
HETATM   39  H   UNK     0      -2.369   2.307   6.090  0.00  0.00           H+0
HETATM   40  H   UNK     0      -3.418   2.180   4.074  0.00  0.00           H+0
HETATM   41  H   UNK     0      -3.145   0.456   3.866  0.00  0.00           H+0
HETATM   42  H   UNK     0       0.502   2.599   5.660  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.005   1.255   4.647  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.868   0.725   1.782  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.426  -0.737   0.079  0.00  0.00           H+0
HETATM   46  H   UNK     0      -0.974  -1.288   1.007  0.00  0.00           H+0
HETATM   47  H   UNK     0      -2.468   0.178  -0.080  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.264   0.072  -2.441  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.207  -2.449  -1.099  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.877  -1.978  -1.328  0.00  0.00           H+0
HETATM   51  H   UNK     0      -2.728  -2.209  -3.731  0.00  0.00           H+0
HETATM   52  H   UNK     0      -2.138  -3.664  -2.991  0.00  0.00           H+0
HETATM   53  H   UNK     0       0.048  -3.324  -5.567  0.00  0.00           H+0
HETATM   54  H   UNK     0       0.236  -4.345  -3.189  0.00  0.00           H+0
HETATM   55  H   UNK     0       0.654  -2.976  -2.155  0.00  0.00           H+0
HETATM   56  H   UNK     0       2.652  -3.702  -3.292  0.00  0.00           H+0
HETATM   57  H   UNK     0       2.691  -3.738  -5.559  0.00  0.00           H+0
HETATM   58  H   UNK     0       2.567  -1.272  -3.127  0.00  0.00           H+0
HETATM   59  H   UNK     0       3.170  -1.609  -5.821  0.00  0.00           H+0
HETATM   60  H   UNK     0       1.578   0.161  -4.853  0.00  0.00           H+0
HETATM   61  H   UNK     0       0.539  -0.802  -6.652  0.00  0.00           H+0
HETATM   62  H   UNK     0      -1.393  -0.788  -5.945  0.00  0.00           H+0
HETATM   63  H   UNK     0      -2.181  -0.107  -4.543  0.00  0.00           H+0
HETATM   64  H   UNK     0      -0.851   0.759  -5.309  0.00  0.00           H+0
HETATM   65  H   UNK     0       0.651  -0.737  -2.093  0.00  0.00           H+0
HETATM   66  H   UNK     0      -0.477   1.805  -3.340  0.00  0.00           H+0
HETATM   67  H   UNK     0       1.217   1.381  -3.184  0.00  0.00           H+0
HETATM   68  H   UNK     0       1.147   1.428  -0.795  0.00  0.00           H+0
HETATM   69  H   UNK     0       0.547   2.942  -1.431  0.00  0.00           H+0
HETATM   70  H   UNK     0      -2.285   2.400  -2.165  0.00  0.00           H+0
HETATM   71  H   UNK     0      -3.050   2.522  -0.595  0.00  0.00           H+0
HETATM   72  H   UNK     0      -1.791   3.680  -1.060  0.00  0.00           H+0
HETATM   73  H   UNK     0       0.060   2.788   1.080  0.00  0.00           H+0
HETATM   74  H   UNK     0      -2.803   1.858   1.549  0.00  0.00           H+0
HETATM   75  H   UNK     0      -2.926   4.049   2.793  0.00  0.00           H+0
HETATM   76  H   UNK     0      -2.491   4.277   1.101  0.00  0.00           H+0
HETATM   77  H   UNK     0      -1.249   4.391   2.347  0.00  0.00           H+0
CONECT    1    2   34   35   36                                             
CONECT    2    3    7    1   37                                             
CONECT    3    4    2   38   39                                             
CONECT    4    5    3   40   41                                             
CONECT    5   32    6    4    8                                             
CONECT    6    5    7                                                       
CONECT    7    6    2   42   43                                             
CONECT    8    9    5                                                       
CONECT    9    8   44   10   31                                             
CONECT   10   11    9   45   46                                             
CONECT   11   12   29   10   47                                             
CONECT   12   13   26   11   48                                             
CONECT   13   14   12   49   50                                             
CONECT   14   15   13   51   52                                             
CONECT   15   14   17   24   16                                             
CONECT   16   15   53                                                       
CONECT   17   15   18   54   55                                             
CONECT   18   19   20   17   56                                             
CONECT   19   18   57                                                       
CONECT   20   18   22   21   58                                             
CONECT   21   20   59                                                       
CONECT   22   23   24   20   60                                             
CONECT   23   22   61                                                       
CONECT   24   22   15   25   26                                             
CONECT   25   24   62   63   64                                             
CONECT   26   12   27   65   24                                             
CONECT   27   26   28   66   67                                             
CONECT   28   29   27   68   69                                             
CONECT   29   30   28   11   31                                             
CONECT   30   29   70   71   72                                             
CONECT   31   32   73   29    9                                             
CONECT   32    5   31   33   74                                             
CONECT   33   32   75   76   77                                             
CONECT   34    1                                                            
CONECT   35    1                                                            
CONECT   36    1                                                            
CONECT   37    2                                                            
CONECT   38    3                                                            
CONECT   39    3                                                            
CONECT   40    4                                                            
CONECT   41    4                                                            
CONECT   42    7                                                            
CONECT   43    7                                                            
CONECT   44    9                                                            
CONECT   45   10                                                            
CONECT   46   10                                                            
CONECT   47   11                                                            
CONECT   48   12                                                            
CONECT   49   13                                                            
CONECT   50   13                                                            
CONECT   51   14                                                            
CONECT   52   14                                                            
CONECT   53   16                                                            
CONECT   54   17                                                            
CONECT   55   17                                                            
CONECT   56   18                                                            
CONECT   57   19                                                            
CONECT   58   20                                                            
CONECT   59   21                                                            
CONECT   60   22                                                            
CONECT   61   23                                                            
CONECT   62   25                                                            
CONECT   63   25                                                            
CONECT   64   25                                                            
CONECT   65   26                                                            
CONECT   66   27                                                            
CONECT   67   27                                                            
CONECT   68   28                                                            
CONECT   69   28                                                            
CONECT   70   30                                                            
CONECT   71   30                                                            
CONECT   72   30                                                            
CONECT   73   31                                                            
CONECT   74   32                                                            
CONECT   75   33                                                            
CONECT   76   33                                                            
CONECT   77   33                                                            
MASTER        0    0    0    0    0    0    0    0   77    0  164    0
END

RDKit          3D

77 82  0  0  0  0  0  0  0  0999 V2000
   -0.3886    0.7442    7.2420 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8050    0.8587    5.7787 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2524    1.3151    5.6329 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6588    1.3948    4.1593 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4688    1.6696    3.2277 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4870    2.4585    3.8949 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1268    1.8035    5.0070 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9025    0.4289    2.7821 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2049    0.6873    1.5610 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5095   -0.4105    0.5438 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4484    0.2381   -0.4876 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4669   -0.4332   -1.8814 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.8779   -1.9078   -1.7747 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8972   -2.6017   -3.1302 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5743   -2.4656   -3.9078 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8222   -3.0666   -5.1868 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5346   -3.2879   -3.1973 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8914   -3.1812   -3.8855 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8212   -3.8778   -5.1360 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3124   -1.7184   -4.0936 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5022   -1.7025   -4.9018 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2293   -0.8749   -4.7978 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2174   -1.3086   -6.1724 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1748   -0.9540   -4.0995 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2062   -0.2358   -5.0186 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1401   -0.2496   -2.6738 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2336    1.2477   -2.7231 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2999    1.8770   -1.3298 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₇H₄₄O₆

Average Mass

464.6430 Da

Monoisotopic Mass

464.31379 Da

IUPAC Name

(1'S,2R,2'R,4'S,5S,7'S,8'R,9'S,12'S,13'S,14'S,15'R,16'R,18'S)-5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane]-14',15',16',18'-tetrol

Traditional Name

(1'S,2R,2'R,4'S,5S,7'S,8'R,9'S,12'S,13'S,14'S,15'R,16'R,18'S)-5,7',9',13'-tetramethyl-5'-oxaspiro[oxane-2,6'-pentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13,18}]icosane]-14',15',16',18'-tetrol

CAS Registry Number

Not Available

SMILES

[H]O[C@]1([H])C([H])([H])[C@@]2(O[H])C([H])([H])C([H])([H])[C@@]3([H])[C@@]4([H])C([H])([H])[C@]5([H])O[C@@]6(OC([H])([H])[C@@]([H])(C([H])([H])[H])C([H])([H])C6([H])[H])[C@@]([H])(C([H])([H])[H])[C@]5([H])[C@@]4(C([H])([H])[H])C([H])([H])C([H])([H])[C@]3([H])[C@@]2(C([H])([H])[H])[C@]([H])(O[H])[C@]1([H])O[H]

InChI Identifier

InChI=1S/C27H44O6/c1-14-5-10-27(32-13-14)15(2)21-20(33-27)11-18-16-6-9-26(31)12-19(28)22(29)23(30)25(26,4)17(16)7-8-24(18,21)3/h14-23,28-31H,5-13H2,1-4H3/t14-,15-,16+,17-,18+,19+,20-,21-,22+,23+,24-,25-,26-,27+/m0/s1

InChI Key

OJOIREGWGDMNGQ-XNNUVBAISA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, C₅D₅N, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Rohdea chinensis	JEOL database	Pan, W.-B., et al, J. Nat. Prod. 66, 161 (2003)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.46	ALOGPS
logP	2.11	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	12.99	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	99.38 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	123.47 m³·mol⁻¹	ChemAxon
Polarizability	52.54 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Pan, W.-B., et al. (2003). Pan, W.-B., et al, J. Nat. Prod. 66, 161 (2003). J. Nat. Prod..

Showing NP-Card for Tupichigenin F (NP0026355)

MOL for NP0026355 (Tupichigenin F)

3D MOL for NP0026355 (Tupichigenin F)

3D SDF for NP0026355 (Tupichigenin F)

3D-SDF for NP0026355 (Tupichigenin F)

PDB for NP0026355 (Tupichigenin F)

3D PDB for NP0026355 (Tupichigenin F)

SMILES for NP0026355 (Tupichigenin F)

INCHI for NP0026355 (Tupichigenin F)

Structure for NP0026355 (Tupichigenin F)

3D Structure for NP0026355 (Tupichigenin F)