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Record Information
Version2.0
Created at2021-06-19 18:13:17 UTC
Updated at2021-06-29 23:51:47 UTC
NP-MRD IDNP0026323
Secondary Accession NumbersNone
Natural Product Identification
Common Name(4S,5E,7Z,12R,14Z,17Z)-4-hydroxy-17,18-didehydrobromovulone-3
Provided ByJEOL DatabaseJEOL Logo
Description (4S,5E,7Z,12R,14Z,17Z)-4-hydroxy-17,18-didehydrobromovulone-3 is found in red sea corals. (4S,5E,7Z,12R,14Z,17Z)-4-hydroxy-17,18-didehydrobromovulone-3 was first documented in 2003 (Rezanka, T., et al.). Based on a literature review very few articles have been published on methyl (4S,5E)-7-[(1Z,2R)-4-bromo-2-hydroxy-2-[(2Z,5Z)-octa-2,5-dien-1-yl]-5-oxocyclopent-3-en-1-ylidene]-4-hydroxyhept-5-enoate.
Structure
Thumb
Synonyms
ValueSource
Methyl (4S,5E)-7-[(1Z,2R)-4-bromo-2-hydroxy-2-[(2Z,5Z)-octa-2,5-dien-1-yl]-5-oxocyclopent-3-en-1-ylidene]-4-hydroxyhept-5-enoic acidGenerator
Chemical FormulaC21H27BrO5
Average Mass439.3460 Da
Monoisotopic Mass438.10419 Da
IUPAC Namemethyl (4S,5E)-7-[(1Z,2R)-4-bromo-2-hydroxy-2-[(2Z,5Z)-octa-2,5-dien-1-yl]-5-oxocyclopent-3-en-1-ylidene]-4-hydroxyhept-5-enoate
Traditional Namemethyl (4S,5E)-7-[(1Z,2R)-4-bromo-2-hydroxy-2-[(2Z,5Z)-octa-2,5-dien-1-yl]-5-oxocyclopent-3-en-1-ylidene]-4-hydroxyhept-5-enoate
CAS Registry NumberNot Available
SMILES
[H]O[C@]([H])(C(\[H])=C(/[H])\C(\[H])=C1/C(=O)C(Br)=C([H])[C@]1(O[H])C([H])([H])C(\[H])=C(\[H])C([H])([H])C(\[H])=C(\[H])C([H])([H])C([H])([H])[H])C([H])([H])C([H])([H])C(=O)OC([H])([H])[H]
InChI Identifier
InChI=1S/C21H27BrO5/c1-3-4-5-6-7-8-14-21(26)15-18(22)20(25)17(21)11-9-10-16(23)12-13-19(24)27-2/h4-5,7-11,15-16,23,26H,3,6,12-14H2,1-2H3/b5-4-,8-7-,10-9+,17-11+/t16-,21-/m1/s1
InChI KeyNQHVJZUAWWZJAE-NZZSBXOZSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 500 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 200 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 300 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 400 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 600 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 700 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 800 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 900 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 1000 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, CD3Cl / CD3OD = 4:1, simulated)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
red sea coralsJEOL database
    • Rezanka, T., et al, Eur. J. Org. Chem. 2003, 309
Chemical Taxonomy
Description Belongs to the class of organic compounds known as clavulones and derivatives. These are ester derivatives of prostanoids.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassEicosanoids
Direct ParentClavulones and derivatives
Alternative Parents
Substituents
  • Clavulone
  • Fatty acid ester
  • Fatty acid methyl ester
  • Alpha-haloketone
  • Tertiary alcohol
  • Methyl ester
  • Carboxylic acid ester
  • Ketone
  • Secondary alcohol
  • Cyclic ketone
  • Vinyl bromide
  • Monocarboxylic acid or derivatives
  • Vinyl halide
  • Bromoalkene
  • Haloalkene
  • Carboxylic acid derivative
  • Hydrocarbon derivative
  • Carbonyl group
  • Organooxygen compound
  • Organobromide
  • Organohalogen compound
  • Organic oxide
  • Organic oxygen compound
  • Alcohol
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.93ALOGPS
logP3.56ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)13.41ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area83.83 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity114.83 m³·mol⁻¹ChemAxon
Polarizability43.8 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID9147402
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10972194
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Rezanka, T., et al. (2003). Rezanka, T., et al, Eur. J. Org. Chem. 2003, 309. Eur. J. Org. Chem..