NP-MRD: Showing NP-Card for Haterumaimide F (NP0025856)

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Record Information

Version

2.0

Created at

2021-06-19 17:52:22 UTC

Updated at

2021-06-29 23:51:03 UTC

NP-MRD ID

NP0025856

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Haterumaimide F

Provided By

JEOL Database JEOL Logo

Description

Haterumaimide F is found in Lissoclinum species. Haterumaimide F was first documented in 2001 (Uddin, M. J., et al.). Based on a literature review very few articles have been published on (3R)-3-[(1S)-2-[(1S,4R,4aS,7S,8aR)-7-chloro-4-hydroxy-5,5,8a-trimethyl-2-methylidene-decahydronaphthalen-1-yl]-1-hydroxyethyl]-5-hydroxy-3,4-dihydro-2H-pyrrol-2-one.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192119523D          

 56 58  0  0  0  0            999 V2000
   -1.8247   -0.4261   -2.5489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9496   -0.6948   -1.5645 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.7761   -0.7147   -0.4640 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3283   -0.5793   -0.2131 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.5675    0.3329    1.0174 C   0  0  1  0  0  0  0  0  0  0  0  0
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 24 22  1  0  0  0  0
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 21 20  1  0  0  0  0
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 22 23  2  0  0  0  0
  4  3  1  0  0  0  0
 25 26  2  0  0  0  0
  3  2  1  0  0  0  0
 11 12  1  0  0  0  0
  2 16  1  0  0  0  0
  7  8  1  1  0  0  0
 14  6  1  0  0  0  0
  6 33  1  1  0  0  0
 16 17  1  0  0  0  0
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  7  9  1  0  0  0  0
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  4  5  1  0  0  0  0
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 15 45  1  0  0  0  0
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M  END

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652306192119523D          

 56 58  0  0  0  0            999 V2000
   -1.8247   -0.4261   -2.5489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9496   -0.6948   -1.5645 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1382   -1.9705   -1.5993 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3747   -1.6845   -1.6087 C   0  0  1  0  0  0  0  0  0  0  0  0
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    1.7761   -0.7147   -0.4640 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3283   -0.5793   -0.2131 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.3533   -2.4467    0.9572 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9589   -1.8773    0.4904 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9252   -2.6485   -0.7077 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2219   -0.0194   -1.1375 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0925   -0.7360   -2.2681 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8846    0.9338   -1.7279 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2394   -0.1972    1.9233 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6438    0.5107    1.1465 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2281    2.2721    0.1161 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9377    0.9602    1.6841 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8522    2.4509    0.7537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5119    2.4349   -1.6440 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8547    1.0399   -2.6481 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1506    1.8901   -1.8200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6949   -0.4127    0.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2152    2.0548    0.6371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6363    2.0371   -1.0412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5067    0.4410   -0.5697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6823    2.0535    0.0920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6238   -0.7480    1.4572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6740    0.5550    3.1299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5698    2.0292    2.6702 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6274   -0.1170    3.6843 H   0  0  0  0  0  0  0  0  0  0  0  0
 11 13  1  0  0  0  0
 10  7  1  0  0  0  0
  7  6  1  0  0  0  0
 14 13  1  0  0  0  0
 25 24  1  0  0  0  0
 24 22  1  0  0  0  0
 22 21  1  0  0  0  0
 21 20  1  0  0  0  0
 14 16  1  0  0  0  0
  2  1  2  3  0  0  0
  6  4  1  0  0  0  0
 22 23  2  0  0  0  0
  4  3  1  0  0  0  0
 25 26  2  0  0  0  0
  3  2  1  0  0  0  0
 11 12  1  0  0  0  0
  2 16  1  0  0  0  0
  7  8  1  1  0  0  0
 14  6  1  0  0  0  0
  6 33  1  1  0  0  0
 16 17  1  0  0  0  0
 20 53  1  6  0  0  0
  7  9  1  0  0  0  0
 17 18  1  0  0  0  0
  4  5  1  0  0  0  0
 11 10  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 14 15  1  6  0  0  0
 20 25  1  0  0  0  0
 16 48  1  1  0  0  0
 11 42  1  6  0  0  0
 10 40  1  0  0  0  0
 10 41  1  0  0  0  0
 13 43  1  0  0  0  0
 13 44  1  0  0  0  0
  4 31  1  1  0  0  0
  3 29  1  0  0  0  0
  3 30  1  0  0  0  0
 17 49  1  0  0  0  0
 17 50  1  0  0  0  0
 18 51  1  6  0  0  0
 24 56  1  0  0  0  0
 21 54  1  0  0  0  0
 21 55  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
  8 34  1  0  0  0  0
  8 35  1  0  0  0  0
  8 36  1  0  0  0  0
  9 37  1  0  0  0  0
  9 38  1  0  0  0  0
  9 39  1  0  0  0  0
  5 32  1  0  0  0  0
 19 52  1  0  0  0  0
 15 45  1  0  0  0  0
 15 46  1  0  0  0  0
 15 47  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0025856

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]([H])(C([H])([H])[C@@]1([H])C(=C([H])[H])C([H])([H])[C@@]([H])(O[H])[C@@]2([H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[C@]([H])(Cl)C([H])([H])[C@]12C([H])([H])[H])[C@]1([H])C(=O)N([H])C(=O)C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H30ClNO4/c1-10-5-15(24)17-19(2,3)8-11(21)9-20(17,4)13(10)7-14(23)12-6-16(25)22-18(12)26/h11-15,17,23-24H,1,5-9H2,2-4H3,(H,22,25,26)/t11-,12+,13-,14-,15+,17-,20+/m0/s1

> <INCHI_KEY>
ILPIGMAGHRKRKI-WMRABNJFSA-N

> <FORMULA>
C20H30ClNO4

> <MOLECULAR_WEIGHT>
383.91

> <EXACT_MASS>
383.1863362

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
56

> <JCHEM_AVERAGE_POLARIZABILITY>
40.67753757113471

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3R)-3-[(1S)-2-[(1S,4R,4aS,7S,8aR)-7-chloro-4-hydroxy-5,5,8a-trimethyl-2-methylidene-decahydronaphthalen-1-yl]-1-hydroxyethyl]pyrrolidine-2,5-dione

> <ALOGPS_LOGP>
2.17

> <JCHEM_LOGP>
1.294453607666667

> <ALOGPS_LOGS>
-3.66

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.809905819219747

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.983858906017781

> <JCHEM_PKA_STRONGEST_BASIC>
-0.4387754105453231

> <JCHEM_POLAR_SURFACE_AREA>
86.63

> <JCHEM_REFRACTIVITY>
99.35869999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.48e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3R)-3-[(1S)-2-[(1S,4R,4aS,7S,8aR)-7-chloro-4-hydroxy-5,5,8a-trimethyl-2-methylidene-hexahydro-1H-naphthalen-1-yl]-1-hydroxyethyl]pyrrolidine-2,5-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 56 58  0  0  0  0  0  0  0  0999 V2000
   -1.8247   -0.4261   -2.5489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9496   -0.6948   -1.5645 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1382   -1.9705   -1.5993 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3747   -1.6845   -1.6087 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7834   -1.1813   -2.8751 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7761   -0.7147   -0.4640 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3283   -0.5793   -0.2131 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9202   -1.9688    0.1504 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1585   -0.0680   -1.4049 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5675    0.3329    1.0174 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8337    1.6650    0.9351 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1541    2.6064    2.4283 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    1.3259    1.4622    0.7868 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9270    0.6334   -0.4684 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1289    1.5318   -1.7128 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6109    0.2152   -0.3804 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5927    1.3961   -0.1515 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0344    1.0049    0.2404 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.7639    2.2324    0.3713 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1357    0.2175    1.5482 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6410    0.9452    2.7995 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6971    0.6553    3.8245 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6228    0.9074    5.0150 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7646    0.0924    3.2084 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5706   -0.1039    1.8816 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4170   -0.4999    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3877    0.4993   -2.6031 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9879   -1.1216   -3.3679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4006   -2.5748   -2.4764 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3931   -2.5676   -0.7146 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8808   -2.6461   -1.4793 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3753   -1.7297   -3.5663 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4268   -1.2321    0.4470 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3533   -2.4467    0.9572 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9589   -1.8773    0.4904 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9252   -2.6485   -0.7077 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2219   -0.0194   -1.1375 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0925   -0.7360   -2.2681 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8846    0.9338   -1.7279 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2394   -0.1972    1.9233 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6438    0.5107    1.1465 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2281    2.2721    0.1161 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9377    0.9602    1.6841 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8522    2.4509    0.7537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5119    2.4349   -1.6440 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8547    1.0399   -2.6481 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1506    1.8901   -1.8200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6949   -0.4127    0.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2152    2.0548    0.6371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6363    2.0371   -1.0412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5067    0.4410   -0.5697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6823    2.0535    0.0920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6238   -0.7480    1.4572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6740    0.5550    3.1299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5698    2.0292    2.6702 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6274   -0.1170    3.6843 H   0  0  0  0  0  0  0  0  0  0  0  0
 11 13  1  0
 10  7  1  0
  7  6  1  0
 14 13  1  0
 25 24  1  0
 24 22  1  0
 22 21  1  0
 21 20  1  0
 14 16  1  0
  2  1  2  3
  6  4  1  0
 22 23  2  0
  4  3  1  0
 25 26  2  0
  3  2  1  0
 11 12  1  0
  2 16  1  0
  7  8  1  1
 14  6  1  0
  6 33  1  1
 16 17  1  0
 20 53  1  6
  7  9  1  0
 17 18  1  0
  4  5  1  0
 11 10  1  0
 18 19  1  0
 18 20  1  0
 14 15  1  6
 20 25  1  0
 16 48  1  1
 11 42  1  6
 10 40  1  0
 10 41  1  0
 13 43  1  0
 13 44  1  0
  4 31  1  1
  3 29  1  0
  3 30  1  0
 17 49  1  0
 17 50  1  0
 18 51  1  6
 24 56  1  0
 21 54  1  0
 21 55  1  0
  1 27  1  0
  1 28  1  0
  8 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
  9 39  1  0
  5 32  1  0
 19 52  1  0
 15 45  1  0
 15 46  1  0
 15 47  1  0
M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0      -1.825  -0.426  -2.549  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.950  -0.695  -1.565  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.138  -1.970  -1.599  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.375  -1.685  -1.609  0.00  0.00           C+0
HETATM    5  O   UNK     0       1.783  -1.181  -2.875  0.00  0.00           O+0
HETATM    6  C   UNK     0       1.776  -0.715  -0.464  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.328  -0.579  -0.213  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.920  -1.969   0.150  0.00  0.00           C+0
HETATM    9  C   UNK     0       4.159  -0.068  -1.405  0.00  0.00           C+0
HETATM   10  C   UNK     0       3.567   0.333   1.017  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.834   1.665   0.935  0.00  0.00           C+0
HETATM   12 Cl   UNK     0       3.154   2.606   2.428  0.00  0.00          Cl+0
HETATM   13  C   UNK     0       1.326   1.462   0.787  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.927   0.633  -0.468  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.129   1.532  -1.713  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.611   0.215  -0.380  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.593   1.396  -0.152  0.00  0.00           C+0
HETATM   18  C   UNK     0      -3.034   1.005   0.240  0.00  0.00           C+0
HETATM   19  O   UNK     0      -3.764   2.232   0.371  0.00  0.00           O+0
HETATM   20  C   UNK     0      -3.136   0.218   1.548  0.00  0.00           C+0
HETATM   21  C   UNK     0      -2.641   0.945   2.800  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.697   0.655   3.825  0.00  0.00           C+0
HETATM   23  O   UNK     0      -3.623   0.907   5.015  0.00  0.00           O+0
HETATM   24  N   UNK     0      -4.765   0.092   3.208  0.00  0.00           N+0
HETATM   25  C   UNK     0      -4.571  -0.104   1.882  0.00  0.00           C+0
HETATM   26  O   UNK     0      -5.417  -0.500   1.097  0.00  0.00           O+0
HETATM   27  H   UNK     0      -2.388   0.499  -2.603  0.00  0.00           H+0
HETATM   28  H   UNK     0      -1.988  -1.122  -3.368  0.00  0.00           H+0
HETATM   29  H   UNK     0      -0.401  -2.575  -2.476  0.00  0.00           H+0
HETATM   30  H   UNK     0      -0.393  -2.568  -0.715  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.881  -2.646  -1.479  0.00  0.00           H+0
HETATM   32  H   UNK     0       1.375  -1.730  -3.566  0.00  0.00           H+0
HETATM   33  H   UNK     0       1.427  -1.232   0.447  0.00  0.00           H+0
HETATM   34  H   UNK     0       3.353  -2.447   0.957  0.00  0.00           H+0
HETATM   35  H   UNK     0       4.959  -1.877   0.490  0.00  0.00           H+0
HETATM   36  H   UNK     0       3.925  -2.648  -0.708  0.00  0.00           H+0
HETATM   37  H   UNK     0       5.222  -0.019  -1.137  0.00  0.00           H+0
HETATM   38  H   UNK     0       4.093  -0.736  -2.268  0.00  0.00           H+0
HETATM   39  H   UNK     0       3.885   0.934  -1.728  0.00  0.00           H+0
HETATM   40  H   UNK     0       3.239  -0.197   1.923  0.00  0.00           H+0
HETATM   41  H   UNK     0       4.644   0.511   1.147  0.00  0.00           H+0
HETATM   42  H   UNK     0       3.228   2.272   0.116  0.00  0.00           H+0
HETATM   43  H   UNK     0       0.938   0.960   1.684  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.852   2.451   0.754  0.00  0.00           H+0
HETATM   45  H   UNK     0       0.512   2.435  -1.644  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.855   1.040  -2.648  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.151   1.890  -1.820  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.695  -0.413   0.517  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.215   2.055   0.637  0.00  0.00           H+0
HETATM   50  H   UNK     0      -1.636   2.037  -1.041  0.00  0.00           H+0
HETATM   51  H   UNK     0      -3.507   0.441  -0.570  0.00  0.00           H+0
HETATM   52  H   UNK     0      -4.682   2.054   0.092  0.00  0.00           H+0
HETATM   53  H   UNK     0      -2.624  -0.748   1.457  0.00  0.00           H+0
HETATM   54  H   UNK     0      -1.674   0.555   3.130  0.00  0.00           H+0
HETATM   55  H   UNK     0      -2.570   2.029   2.670  0.00  0.00           H+0
HETATM   56  H   UNK     0      -5.627  -0.117   3.684  0.00  0.00           H+0
CONECT    1    2   27   28                                                  
CONECT    2    1    3   16                                                  
CONECT    3    4    2   29   30                                             
CONECT    4    6    3    5   31                                             
CONECT    5    4   32                                                       
CONECT    6    7    4   14   33                                             
CONECT    7   10    6    8    9                                             
CONECT    8    7   34   35   36                                             
CONECT    9    7   37   38   39                                             
CONECT   10    7   11   40   41                                             
CONECT   11   13   12   10   42                                             
CONECT   12   11                                                            
CONECT   13   11   14   43   44                                             
CONECT   14   13   16    6   15                                             
CONECT   15   14   45   46   47                                             
CONECT   16   14    2   17   48                                             
CONECT   17   16   18   49   50                                             
CONECT   18   17   19   20   51                                             
CONECT   19   18   52                                                       
CONECT   20   21   53   18   25                                             
CONECT   21   22   20   54   55                                             
CONECT   22   24   21   23                                                  
CONECT   23   22                                                            
CONECT   24   25   22   56                                                  
CONECT   25   24   26   20                                                  
CONECT   26   25                                                            
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    3                                                            
CONECT   30    3                                                            
CONECT   31    4                                                            
CONECT   32    5                                                            
CONECT   33    6                                                            
CONECT   34    8                                                            
CONECT   35    8                                                            
CONECT   36    8                                                            
CONECT   37    9                                                            
CONECT   38    9                                                            
CONECT   39    9                                                            
CONECT   40   10                                                            
CONECT   41   10                                                            
CONECT   42   11                                                            
CONECT   43   13                                                            
CONECT   44   13                                                            
CONECT   45   15                                                            
CONECT   46   15                                                            
CONECT   47   15                                                            
CONECT   48   16                                                            
CONECT   49   17                                                            
CONECT   50   17                                                            
CONECT   51   18                                                            
CONECT   52   19                                                            
CONECT   53   20                                                            
CONECT   54   21                                                            
CONECT   55   21                                                            
CONECT   56   24                                                            
MASTER        0    0    0    0    0    0    0    0   56    0  116    0
END

RDKit          3D

56 58  0  0  0  0  0  0  0  0999 V2000
   -1.8247   -0.4261   -2.5489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9496   -0.6948   -1.5645 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1382   -1.9705   -1.5993 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3747   -1.6845   -1.6087 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7834   -1.1813   -2.8751 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7761   -0.7147   -0.4640 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3283   -0.5793   -0.2131 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9202   -1.9688    0.1504 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1585   -0.0680   -1.4049 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5675    0.3329    1.0174 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8337    1.6650    0.9351 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1541    2.6064    2.4283 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    1.3259    1.4622    0.7868 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9270    0.6334   -0.4684 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1289    1.5318   -1.7128 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6109    0.2152   -0.3804 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5927    1.3961   -0.1515 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0344    1.0049    0.2404 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.7639    2.2324    0.3713 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1357    0.2175    1.5482 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6410    0.9452    2.7995 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6971    0.6553    3.8245 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6228    0.9074    5.0150 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7646    0.0924    3.2084 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5706   -0.1039    1.8816 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4170   -0.4999    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3877    0.4993   -2.6031 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9879   -1.1216   -3.3679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4006   -2.5748   -2.4764 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3931   -2.5676   -0.7146 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8808   -2.6461   -1.4793 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3753   -1.7297   -3.5663 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4268   -1.2321    0.4470 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3533   -2.4467    0.9572 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9589   -1.8773    0.4904 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9252   -2.6485   -0.7077 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2219   -0.0194   -1.1375 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0925   -0.7360   -2.2681 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8846    0.9338   -1.7279 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2394   -0.1972    1.9233 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6438    0.5107    1.1465 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2281    2.2721    0.1161 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9377    0.9602    1.6841 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8522    2.4509    0.7537 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5119    2.4349   -1.6440 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8547    1.0399   -2.6481 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1506    1.8901   -1.8200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6949   -0.4127    0.5170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2152    2.0548    0.6371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6363    2.0371   -1.0412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5067    0.4410   -0.5697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6823    2.0535    0.0920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6238   -0.7480    1.4572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6740    0.5550    3.1299 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5698    2.0292    2.6702 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6274   -0.1170    3.6843 H   0  0  0  0  0  0  0  0  0  0  0  0
 11 13  1  0
 10  7  1  0
  7  6  1  0
 14 13  1  0
 25 24  1  0
 24 22  1  0
 22 21  1  0
 21 20  1  0
 14 16  1  0
  2  1  2  3
  6  4  1  0
 22 23  2  0
  4  3  1  0
 25 26  2  0
  3  2  1  0
 11 12  1  0
  2 16  1  0
  7  8  1  1
 14  6  1  0
  6 33  1  1
 16 17  1  0
 20 53  1  6
  7  9  1  0
 17 18  1  0
  4  5  1  0
 11 10  1  0
 18 19  1  0
 18 20  1  0
 14 15  1  6
 20 25  1  0
 16 48  1  1
 11 42  1  6
 10 40  1  0
 10 41  1  0
 13 43  1  0
 13 44  1  0
  4 31  1  1
  3 29  1  0
  3 30  1  0
 17 49  1  0
 17 50  1  0
 18 51  1  6
 24 56  1  0
 21 54  1  0
 21 55  1  0
  1 27  1  0
  1 28  1  0
  8 34  1  0
  8 35  1  0
  8 36  1  0
  9 37  1  0
  9 38  1  0
  9 39  1  0
  5 32  1  0
 19 52  1  0
 15 45  1  0
 15 46  1  0
 15 47  1  0
M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₃₀ClNO₄

Average Mass

383.9100 Da

Monoisotopic Mass

383.18634 Da

IUPAC Name

(3R)-3-[(1S)-2-[(1S,4R,4aS,7S,8aR)-7-chloro-4-hydroxy-5,5,8a-trimethyl-2-methylidene-decahydronaphthalen-1-yl]-1-hydroxyethyl]pyrrolidine-2,5-dione

Traditional Name

(3R)-3-[(1S)-2-[(1S,4R,4aS,7S,8aR)-7-chloro-4-hydroxy-5,5,8a-trimethyl-2-methylidene-hexahydro-1H-naphthalen-1-yl]-1-hydroxyethyl]pyrrolidine-2,5-dione

CAS Registry Number

Not Available

SMILES

[H]O[C@@]([H])(C([H])([H])[C@@]1([H])C(=C([H])[H])C([H])([H])[C@@]([H])(O[H])[C@@]2([H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[C@]([H])(Cl)C([H])([H])[C@]12C([H])([H])[H])[C@]1([H])C(=O)N([H])C(=O)C1([H])[H]

InChI Identifier

InChI=1S/C20H30ClNO4/c1-10-5-15(24)17-19(2,3)8-11(21)9-20(17,4)13(10)7-14(23)12-6-16(25)22-18(12)26/h11-15,17,23-24H,1,5-9H2,2-4H3,(H,22,25,26)/t11-,12+,13-,14-,15+,17-,20+/m0/s1

InChI Key

ILPIGMAGHRKRKI-WMRABNJFSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, DMSO-d6, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Lissoclinum sp.	JEOL database	Uddin, M. J., et al, J. Nat. Prod. 64, 1169 (2001)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.17	ALOGPS
logP	1.29	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Acidic)	9.98	ChemAxon
pKa (Strongest Basic)	-0.44	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	86.63 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	99.36 m³·mol⁻¹	ChemAxon
Polarizability	40.68 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8650496

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10475085

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Uddin, M. J., et al. (2001). Uddin, M. J., et al, J. Nat. Prod. 64, 1169 (2001). J. Nat. Prod..

Showing NP-Card for Haterumaimide F (NP0025856)

MOL for NP0025856 (Haterumaimide F)

3D MOL for NP0025856 (Haterumaimide F)

3D SDF for NP0025856 (Haterumaimide F)

3D-SDF for NP0025856 (Haterumaimide F)

PDB for NP0025856 (Haterumaimide F)

3D PDB for NP0025856 (Haterumaimide F)

SMILES for NP0025856 (Haterumaimide F)

INCHI for NP0025856 (Haterumaimide F)

Structure for NP0025856 (Haterumaimide F)

3D Structure for NP0025856 (Haterumaimide F)