NP-MRD: Showing NP-Card for Resibufogenin 3-formate. (NP0025849)

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Record Information

Version

2.0

Created at

2021-06-19 17:52:04 UTC

Updated at

2021-06-29 23:51:02 UTC

NP-MRD ID

NP0025849

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Resibufogenin 3-formate.

Provided By

JEOL Database JEOL Logo

Description

Resibufogenin 3-formate. was first documented in 2001 (PMID: 11575946). Based on a literature review very few articles have been published on 3beta-formyloxyresibufogenin.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192119523D          

 62 67  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652306192119523D          

 62 67  0  0  0  0            999 V2000
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    4.7870    1.1989    2.5050 H   0  0  0  0  0  0  0  0  0  0  0  0
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 17 19  1  0  0  0  0
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  4  5  1  0  0  0  0
 17 18  1  6  0  0  0
  4  3  1  0  0  0  0
  5  6  1  0  0  0  0
  2  1  1  6  0  0  0
 19 27  1  0  0  0  0
  5  9  1  0  0  0  0
  2 14  1  0  0  0  0
 10 11  1  0  0  0  0
 19 20  1  0  0  0  0
 11 12  1  0  0  0  0
 30 29  1  6  0  0  0
 12 13  1  0  0  0  0
 20 21  1  0  0  0  0
 14 13  1  0  0  0  0
 21 22  2  0  0  0  0
  9 10  1  0  0  0  0
 22 23  1  0  0  0  0
  2  3  1  0  0  0  0
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 22 58  1  0  0  0  0
 26 59  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0025849

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]C(=O)O[C@@]1([H])C([H])([H])C([H])([H])[C@@]2(C([H])([H])[H])[C@]([H])(C([H])([H])C([H])([H])[C@]3([H])[C@]2([H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])[C@@]([H])(C4=C([H])OC(=O)C([H])=C4[H])C([H])([H])[C@@]4([H])O[C@@]324)C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C25H32O5/c1-23-9-7-17(29-14-26)11-16(23)4-5-19-18(23)8-10-24(2)20(12-21-25(19,24)30-21)15-3-6-22(27)28-13-15/h3,6,13-14,16-21H,4-5,7-12H2,1-2H3/t16-,17+,18+,19-,20-,21-,23+,24-,25-/m1/s1

> <INCHI_KEY>
ANZIXHORKDWMAO-XHMVMRONSA-N

> <FORMULA>
C25H32O5

> <MOLECULAR_WEIGHT>
412.526

> <EXACT_MASS>
412.22497413

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
62

> <JCHEM_AVERAGE_POLARIZABILITY>
45.12786515017681

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,4R,6S,7R,10S,11S,14S,16R)-7,11-dimethyl-6-(2-oxo-2H-pyran-5-yl)-3-oxapentacyclo[8.8.0.0^{2,4}.0^{2,7}.0^{11,16}]octadecan-14-yl formate

> <ALOGPS_LOGP>
4.37

> <JCHEM_LOGP>
3.7559881713333327

> <ALOGPS_LOGS>
-5.81

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.230835987023099

> <JCHEM_POLAR_SURFACE_AREA>
65.13000000000001

> <JCHEM_REFRACTIVITY>
111.00109999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.37e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,4R,6S,7R,10S,11S,14S,16R)-7,11-dimethyl-6-(6-oxopyran-3-yl)-3-oxapentacyclo[8.8.0.0^{2,4}.0^{2,7}.0^{11,16}]octadecan-14-yl formate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

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 22 58  1  0
 26 59  1  0
M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0       3.475   1.019  -1.984  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.058   1.448  -0.552  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.113   3.003  -0.536  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.953   3.621   0.852  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.998   3.085   1.831  0.00  0.00           C+0
HETATM    6  O   UNK     0       5.321   3.484   1.420  0.00  0.00           O+0
HETATM    7  C   UNK     0       5.712   4.725   1.801  0.00  0.00           C+0
HETATM    8  O   UNK     0       5.062   5.531   2.447  0.00  0.00           O+0
HETATM    9  C   UNK     0       3.965   1.556   1.871  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.108   0.908   0.473  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.066  -0.624   0.587  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.678  -1.156   0.923  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.602  -0.657  -0.054  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.626   0.893  -0.192  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.519   1.347  -1.173  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.866   0.858  -0.736  0.00  0.00           C+0
HETATM   17  C   UNK     0      -0.959  -0.683  -0.575  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.927  -1.363  -1.952  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.258  -1.018   0.274  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.145  -2.169  -0.185  0.00  0.00           C+0
HETATM   21  C   UNK     0      -2.775  -3.551   0.010  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.576  -4.543  -0.397  0.00  0.00           C+0
HETATM   23  C   UNK     0      -4.864  -4.261  -1.054  0.00  0.00           C+0
HETATM   24  O   UNK     0      -5.586  -5.180  -1.425  0.00  0.00           O+0
HETATM   25  O   UNK     0      -5.200  -2.946  -1.220  0.00  0.00           O+0
HETATM   26  C   UNK     0      -4.328  -1.940  -0.777  0.00  0.00           C+0
HETATM   27  C   UNK     0      -1.768  -1.143   1.744  0.00  0.00           C+0
HETATM   28  C   UNK     0      -0.294  -1.389   1.675  0.00  0.00           C+0
HETATM   29  O   UNK     0       0.121  -2.458   0.817  0.00  0.00           O+0
HETATM   30  C   UNK     0       0.205  -1.124   0.293  0.00  0.00           C+0
HETATM   31  H   UNK     0       4.512   1.310  -2.191  0.00  0.00           H+0
HETATM   32  H   UNK     0       3.407  -0.060  -2.143  0.00  0.00           H+0
HETATM   33  H   UNK     0       2.854   1.504  -2.744  0.00  0.00           H+0
HETATM   34  H   UNK     0       2.362   3.432  -1.209  0.00  0.00           H+0
HETATM   35  H   UNK     0       4.080   3.331  -0.943  0.00  0.00           H+0
HETATM   36  H   UNK     0       1.946   3.426   1.237  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.050   4.708   0.756  0.00  0.00           H+0
HETATM   38  H   UNK     0       3.797   3.460   2.842  0.00  0.00           H+0
HETATM   39  H   UNK     0       6.733   4.907   1.430  0.00  0.00           H+0
HETATM   40  H   UNK     0       4.787   1.199   2.505  0.00  0.00           H+0
HETATM   41  H   UNK     0       3.033   1.241   2.353  0.00  0.00           H+0
HETATM   42  H   UNK     0       5.111   1.169   0.106  0.00  0.00           H+0
HETATM   43  H   UNK     0       4.776  -0.961   1.353  0.00  0.00           H+0
HETATM   44  H   UNK     0       4.406  -1.074  -0.353  0.00  0.00           H+0
HETATM   45  H   UNK     0       2.425  -0.876   1.950  0.00  0.00           H+0
HETATM   46  H   UNK     0       2.712  -2.253   0.910  0.00  0.00           H+0
HETATM   47  H   UNK     0       1.835  -1.097  -1.032  0.00  0.00           H+0
HETATM   48  H   UNK     0       1.345   1.297   0.790  0.00  0.00           H+0
HETATM   49  H   UNK     0       0.728   0.995  -2.187  0.00  0.00           H+0
HETATM   50  H   UNK     0       0.478   2.440  -1.221  0.00  0.00           H+0
HETATM   51  H   UNK     0      -1.618   1.205  -1.455  0.00  0.00           H+0
HETATM   52  H   UNK     0      -1.101   1.348   0.218  0.00  0.00           H+0
HETATM   53  H   UNK     0      -1.797  -1.080  -2.554  0.00  0.00           H+0
HETATM   54  H   UNK     0      -0.033  -1.093  -2.522  0.00  0.00           H+0
HETATM   55  H   UNK     0      -0.907  -2.454  -1.864  0.00  0.00           H+0
HETATM   56  H   UNK     0      -2.910  -0.131   0.251  0.00  0.00           H+0
HETATM   57  H   UNK     0      -1.836  -3.796   0.492  0.00  0.00           H+0
HETATM   58  H   UNK     0      -3.320  -5.586  -0.264  0.00  0.00           H+0
HETATM   59  H   UNK     0      -4.753  -0.968  -0.990  0.00  0.00           H+0
HETATM   60  H   UNK     0      -1.940  -0.195   2.269  0.00  0.00           H+0
HETATM   61  H   UNK     0      -2.280  -1.928   2.308  0.00  0.00           H+0
HETATM   62  H   UNK     0       0.270  -1.164   2.563  0.00  0.00           H+0
CONECT    1    2   31   32   33                                             
CONECT    2    1   14    3   10                                             
CONECT    3    4    2   34   35                                             
CONECT    4    5    3   36   37                                             
CONECT    5    4    6    9   38                                             
CONECT    6    5    7                                                       
CONECT    7    6    8   39                                                  
CONECT    8    7                                                            
CONECT    9    5   10   40   41                                             
CONECT   10   11    9    2   42                                             
CONECT   11   10   12   43   44                                             
CONECT   12   11   13   45   46                                             
CONECT   13   12   14   30   47                                             
CONECT   14    2   13   15   48                                             
CONECT   15   16   14   49   50                                             
CONECT   16   15   17   51   52                                             
CONECT   17   19   18   30   16                                             
CONECT   18   17   53   54   55                                             
CONECT   19   17   27   20   56                                             
CONECT   20   19   21   26                                                  
CONECT   21   20   22   57                                                  
CONECT   22   21   23   58                                                  
CONECT   23   22   25   24                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   20   59                                                  
CONECT   27   19   28   60   61                                             
CONECT   28   29   30   27   62                                             
CONECT   29   30   28                                                       
CONECT   30   29   13   17   28                                             
CONECT   31    1                                                            
CONECT   32    1                                                            
CONECT   33    1                                                            
CONECT   34    3                                                            
CONECT   35    3                                                            
CONECT   36    4                                                            
CONECT   37    4                                                            
CONECT   38    5                                                            
CONECT   39    7                                                            
CONECT   40    9                                                            
CONECT   41    9                                                            
CONECT   42   10                                                            
CONECT   43   11                                                            
CONECT   44   11                                                            
CONECT   45   12                                                            
CONECT   46   12                                                            
CONECT   47   13                                                            
CONECT   48   14                                                            
CONECT   49   15                                                            
CONECT   50   15                                                            
CONECT   51   16                                                            
CONECT   52   16                                                            
CONECT   53   18                                                            
CONECT   54   18                                                            
CONECT   55   18                                                            
CONECT   56   19                                                            
CONECT   57   21                                                            
CONECT   58   22                                                            
CONECT   59   26                                                            
CONECT   60   27                                                            
CONECT   61   27                                                            
CONECT   62   28                                                            
MASTER        0    0    0    0    0    0    0    0   62    0  134    0
END

RDKit          3D

62 67  0  0  0  0  0  0  0  0999 V2000
    3.4752    1.0192   -1.9838 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0581    1.4476   -0.5519 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1132    3.0035   -0.5363 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9528    3.6207    0.8518 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9976    3.0848    1.8307 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.3208    3.4843    1.4200 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7120    4.7253    1.8012 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0624    5.5310    2.4472 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9648    1.5557    1.8712 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1078    0.9080    0.4728 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.0660   -0.6237    0.5874 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6778   -1.1564    0.9226 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6023   -0.6568   -0.0542 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6264    0.8931   -0.1917 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5191    1.3473   -1.1726 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8655    0.8576   -0.7363 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9593   -0.6828   -0.5752 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9273   -1.3634   -1.9515 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2580   -1.0177    0.2741 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.1450   -2.1692   -0.1853 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7754   -3.5512    0.0104 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5758   -4.5426   -0.3968 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8637   -4.2610   -1.0541 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5861   -5.1795   -1.4248 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2000   -2.9455   -1.2196 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3276   -1.9402   -0.7765 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7676   -1.1425    1.7443 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2943   -1.3891    1.6748 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1210   -2.4576    0.8173 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2051   -1.1244    0.2932 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.5121    1.3096   -2.1912 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4074   -0.0597   -2.1426 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8540    1.5040   -2.7445 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3625    3.4318   -1.2087 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0802    3.3312   -0.9432 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9460    3.4263    1.2373 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0500    4.7083    0.7560 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7968    3.4601    2.8420 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7327    4.9065    1.4302 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7870    1.1989    2.5050 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0332    1.2410    2.3535 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1110    1.1695    0.1063 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7759   -0.9605    1.3529 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4058   -1.0744   -0.3526 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4246   -0.8756    1.9504 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7120   -2.2528    0.9097 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8348   -1.0969   -1.0318 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3449    1.2972    0.7901 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7281    0.9949   -2.1873 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4778    2.4399   -1.2209 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6182    1.2052   -1.4549 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1011    1.3479    0.2184 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7969   -1.0798   -2.5540 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0331   -1.0929   -2.5217 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9067   -2.4545   -1.8642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9101   -0.1309    0.2514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8357   -3.7955    0.4919 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3195   -5.5856   -0.2643 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7525   -0.9681   -0.9897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9400   -0.1949    2.2686 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2797   -1.9283    2.3083 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2704   -1.1639    2.5630 H   0  0  0  0  0  0  0  0  0  0  0  0
 17 19  1  0
 16 15  1  0
  4  5  1  0
 17 18  1  6
  4  3  1  0
  5  6  1  0
  2  1  1  6
 19 27  1  0
  5  9  1  0
  2 14  1  0
 10 11  1  0
 19 20  1  0
 11 12  1  0
 30 29  1  6
 12 13  1  0
 20 21  1  0
 14 13  1  0
 21 22  2  0
  9 10  1  0
 22 23  1  0
  2  3  1  0
 23 25  1  0
  2 10  1  0
 25 26  1  0
 26 20  2  0
 14 15  1  0
 23 24  2  0
 13 30  1  0
  6  7  1  0
 17 30  1  0
  7  8  2  0
  7 39  1  0
 16 17  1  0
 10 42  1  6
 28 29  1  0
 30 28  1  0
 14 48  1  1
 28 27  1  0
 13 47  1  6
  4 36  1  0
  4 37  1  0
  5 38  1  1
  9 40  1  0
  9 41  1  0
 11 43  1  0
 11 44  1  0
 12 45  1  0
 12 46  1  0
 16 51  1  0
 16 52  1  0
 15 49  1  0
 15 50  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
 28 62  1  1
 18 53  1  0
 18 54  1  0
 18 55  1  0
  3 34  1  0
  3 35  1  0
 19 56  1  1
 27 60  1  0
 27 61  1  0
 21 57  1  0
 22 58  1  0
 26 59  1  0
M  END

View in JSmol

Synonyms

Value	Source
3b-Formyloxyresibufogenin	Generator
3Β-formyloxyresibufogenin	Generator

Chemical Formula

C₂₅H₃₂O₅

Average Mass

412.5260 Da

Monoisotopic Mass

412.22497 Da

IUPAC Name

(1R,2S,4R,6S,7R,10S,11S,14S,16R)-7,11-dimethyl-6-(2-oxo-2H-pyran-5-yl)-3-oxapentacyclo[8.8.0.0^{2,4}.0^{2,7}.0^{11,16}]octadecan-14-yl formate

Traditional Name

(1R,2S,4R,6S,7R,10S,11S,14S,16R)-7,11-dimethyl-6-(6-oxopyran-3-yl)-3-oxapentacyclo[8.8.0.0^{2,4}.0^{2,7}.0^{11,16}]octadecan-14-yl formate

CAS Registry Number

Not Available

SMILES

[H]C(=O)O[C@@]1([H])C([H])([H])C([H])([H])[C@@]2(C([H])([H])[H])[C@]([H])(C([H])([H])C([H])([H])[C@]3([H])[C@]2([H])C([H])([H])C([H])([H])[C@]2(C([H])([H])[H])[C@@]([H])(C4=C([H])OC(=O)C([H])=C4[H])C([H])([H])[C@@]4([H])O[C@@]324)C1([H])[H]

InChI Identifier

InChI=1S/C25H32O5/c1-23-9-7-17(29-14-26)11-16(23)4-5-19-18(23)8-10-24(2)20(12-21-25(19,24)30-21)15-3-6-22(27)28-13-15/h3,6,13-14,16-21H,4-5,7-12H2,1-2H3/t16-,17+,18+,19-,20-,21-,23+,24-,25-/m1/s1

InChI Key

ANZIXHORKDWMAO-XHMVMRONSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CD₃OD, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Chinese traditional drug Ch'an Su

Species Where Detected

Species Name	Source	Reference
Bufo gargarizans	KNApSAcK Database	22123792

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.37	ALOGPS
logP	3.76	ChemAxon
logS	-5.8	ALOGPS
pKa (Strongest Basic)	-4.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	65.13 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	111 m³·mol⁻¹	ChemAxon
Polarizability	45.13 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00045557

Chemspider ID

9091889

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Nogawa T, Kamano Y, Yamashita A, Pettit GR: Isolation and structure of five new cancer cell growth inhibitory bufadienolides from the Chinese traditional drug Ch'an Su. J Nat Prod. 2001 Sep;64(9):1148-52. doi: 10.1021/np0101088. [PubMed:11575946 ]
Nogawa, T., et al. (2001). Nogawa, T., et al, J. Nat. Prod. 64, 1148 (2001). J. Nat. Prod..

Showing NP-Card for Resibufogenin 3-formate. (NP0025849)

MOL for NP0025849 (Resibufogenin 3-formate.)

3D MOL for NP0025849 (Resibufogenin 3-formate.)

3D SDF for NP0025849 (Resibufogenin 3-formate.)

3D-SDF for NP0025849 (Resibufogenin 3-formate.)

PDB for NP0025849 (Resibufogenin 3-formate.)

3D PDB for NP0025849 (Resibufogenin 3-formate.)

SMILES for NP0025849 (Resibufogenin 3-formate.)

INCHI for NP0025849 (Resibufogenin 3-formate.)

Structure for NP0025849 (Resibufogenin 3-formate.)

3D Structure for NP0025849 (Resibufogenin 3-formate.)