NP-MRD: Showing NP-Card for Penochalasin H (NP0025369)

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Record Information

Version

2.0

Created at

2021-06-19 17:30:32 UTC

Updated at

2021-06-29 23:50:17 UTC

NP-MRD ID

NP0025369

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Penochalasin H

Provided By

JEOL Database JEOL Logo

Description

Penochalasin H is found in Enterromorpha intestinalis. Penochalasin H was first documented in 2001 (Iwamoto, C., et al.).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306192119303D          

 77 81  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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 38  2  1  0
  6  7  1  0
  7  8  1  0
  8 16  1  0
 11 16  2  0
 20 21  1  1
 16 15  1  0
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 25 27  1  0
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 37 36  1  0
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 32 31  1  0
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 29 30  1  0
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 30 63  1  0
 30 64  1  0
 30 65  1  0
 35 73  1  0
 39 77  1  0
M  END


  Mrv1652306192119303D          

 77 81  0  0  0  0            999 V2000
   -5.8269    0.6494   -0.1034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3463    0.3512   -0.1679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8340   -0.7079   -0.8354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7001   -1.8051   -1.4160 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3279   -0.9247   -1.0251 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9531   -0.8980   -2.5351 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8837   -1.9262   -2.9468 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4489   -3.3029   -3.1182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1741   -3.7505   -4.2068 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5175   -5.0570   -3.9898 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0302   -5.4810   -2.7768 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1410   -6.7282   -2.1499 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5336   -6.8827   -0.9011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8415   -5.8311   -0.3076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7390   -4.5915   -0.9497 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3466   -4.4052   -2.2085 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.2760    1.1439   -1.5741 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.0817   -0.4276    0.0182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0492   -1.4654    0.6872 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2094    0.2658   -0.3814 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3768   -0.2082    0.4715 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6242    0.5824    0.1583 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3134    0.3244   -0.8343 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9929    1.7463    1.0955 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.3468    2.1419    0.8912 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0989    2.9394    0.8436 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3056    3.6469   -0.4772 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1664    3.4047    1.7027 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7963    2.8702    3.0720 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4850    3.7340    4.1330 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2665    2.8965    3.2911 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.4738    1.7833    2.5953 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2020    1.9398    1.4773 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0477    0.8306    0.8484 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4775    1.3505    0.5650 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1186    1.6320    1.8149 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0025    1.7236   -0.2304 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.3957    0.1554   -0.8962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9128   -1.6147   -2.4719 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6496   -1.9128   -0.8831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1990   -2.7755   -1.3326 H   0  0  0  0  0  0  0  0  0  0  0  0
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    1.0842    1.3433   -0.2602 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4025    0.0629   -1.4401 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5929   -1.2674    0.2877 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1531   -0.1206    1.5403 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9395    1.3801    2.1233 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5925    1.8038    0.0067 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3175    4.0592   -0.5411 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6060    4.4783   -0.6160 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1553    2.9563   -1.3129 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6093    4.2963    1.4080 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1441    1.8392    3.1964 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2693    3.3572    5.1387 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1487    4.7761    4.0849 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5732    3.7238    4.0034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1459    3.8704    2.9951 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.4393    0.8103    3.0854 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2272    2.9154    0.9897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1441    0.0434    1.6140 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4554    2.2851   -0.0092 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5430    2.2429    2.3056 H   0  0  0  0  0  0  0  0  0  0  0  0
  5  6  1  0  0  0  0
  6 17  1  0  0  0  0
 17 18  1  0  0  0  0
 38  2  1  0  0  0  0
  6  7  1  0  0  0  0
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 11 16  2  0  0  0  0
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 10  9  1  0  0  0  0
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 34 32  1  0  0  0  0
  3  4  1  0  0  0  0
  3  5  1  0  0  0  0
  2  1  1  0  0  0  0
 32 31  1  0  0  0  0
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 20  5  1  0  0  0  0
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  9  8  2  0  0  0  0
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  1 40  1  0  0  0  0
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  1 42  1  0  0  0  0
 33 68  1  0  0  0  0
 33 69  1  0  0  0  0
 33 70  1  0  0  0  0
 30 63  1  0  0  0  0
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 30 65  1  0  0  0  0
 35 73  1  0  0  0  0
 39 77  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0025369

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@]1([H])C(=C(C([H])([H])[H])[C@@]2([H])[C@@]([H])(N([H])C(=O)[C@]22C(=O)C([H])([H])C([H])([H])C(=O)[C@@]([H])(O[H])\C(=C([H])/[C@@]([H])(C([H])([H])[H])C([H])([H])\C([H])=C([H])\[C@@]12[H])C([H])([H])[H])C([H])([H])C1=C([H])N([H])C2=C1C([H])=C([H])C([H])=C2[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C32H38N2O5/c1-17-8-7-10-23-30(38)20(4)19(3)28-25(15-21-16-33-24-11-6-5-9-22(21)24)34-31(39)32(23,28)27(36)13-12-26(35)29(37)18(2)14-17/h5-7,9-11,14,16-17,23,25,28-30,33,37-38H,8,12-13,15H2,1-4H3,(H,34,39)/b10-7+,18-14-/t17-,23-,25-,28-,29-,30+,32+/m0/s1

> <INCHI_KEY>
LXPGDDICGFGPQK-BAXSRCNJSA-N

> <FORMULA>
C32H38N2O5

> <MOLECULAR_WEIGHT>
530.665

> <EXACT_MASS>
530.278072332

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
77

> <JCHEM_AVERAGE_POLARIZABILITY>
58.3178106563174

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,6S,6aR,10S,13S,17aR,17bR)-6,13-dihydroxy-3-[(1H-indol-3-yl)methyl]-4,5,10,12-tetramethyl-1H,2H,3H,6H,6aH,9H,10H,13H,14H,15H,16H,17H,17bH-cyclotrideca[e]isoindole-1,14,17-trione

> <ALOGPS_LOGP>
3.08

> <JCHEM_LOGP>
3.522671156666667

> <ALOGPS_LOGS>
-4.77

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.959115923944342

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.793020088717157

> <JCHEM_PKA_STRONGEST_BASIC>
-2.5599470187678173

> <JCHEM_POLAR_SURFACE_AREA>
119.49000000000001

> <JCHEM_REFRACTIVITY>
152.34019999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
9.09e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,6S,6aR,10S,13S,17aR,17bR)-6,13-dihydroxy-3-(1H-indol-3-ylmethyl)-4,5,10,12-tetramethyl-2H,3H,6H,6aH,9H,10H,13H,15H,16H,17bH-cyclotrideca[e]isoindole-1,14,17-trione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 77 81  0  0  0  0  0  0  0  0999 V2000
   -5.8269    0.6494   -0.1034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3463    0.3512   -0.1679 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.3279   -0.9247   -1.0251 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9531   -0.8980   -2.5351 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -2.1741   -3.7505   -4.2068 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.0302   -5.4810   -2.7768 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.2094    0.2658   -0.3814 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.9929    1.7463    1.0955 C   0  0  1  0  0  0  0  0  0  0  0  0
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    2.1664    3.4047    1.7027 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.2665    2.8965    3.2911 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.1990   -2.7755   -1.3326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1054   -1.9032   -0.5852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8273   -1.0182   -3.1841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0510   -1.9425   -2.2367 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.0485   -5.6357   -4.6258 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.1531   -0.1206    1.5403 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.5925    1.8038    0.0067 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3175    4.0592   -0.5411 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6060    4.4783   -0.6160 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1553    2.9563   -1.3129 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6093    4.2963    1.4080 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1441    1.8392    3.1964 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2693    3.3572    5.1387 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.5732    3.7238    4.0034 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1459    3.8704    2.9951 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0485    2.7975    4.3628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4393    0.8103    3.0854 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2272    2.9154    0.9897 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.4554    2.2851   -0.0092 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5430    2.2429    2.3056 H   0  0  0  0  0  0  0  0  0  0  0  0
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 39 77  1  0
M  END

HEADER    PROTEIN                                 19-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.827   0.649  -0.103  0.00  0.00           C+0
HETATM    2  C   UNK     0      -4.346   0.351  -0.168  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.834  -0.708  -0.835  0.00  0.00           C+0
HETATM    4  C   UNK     0      -4.700  -1.805  -1.416  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.328  -0.925  -1.025  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.953  -0.898  -2.535  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.884  -1.926  -2.947  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.449  -3.303  -3.118  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.174  -3.751  -4.207  0.00  0.00           C+0
HETATM   10  N   UNK     0      -2.518  -5.057  -3.990  0.00  0.00           N+0
HETATM   11  C   UNK     0      -2.030  -5.481  -2.777  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.141  -6.728  -2.150  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.534  -6.883  -0.901  0.00  0.00           C+0
HETATM   14  C   UNK     0      -0.842  -5.831  -0.308  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.739  -4.591  -0.950  0.00  0.00           C+0
HETATM   16  C   UNK     0      -1.347  -4.405  -2.208  0.00  0.00           C+0
HETATM   17  N   UNK     0      -1.504   0.458  -2.740  0.00  0.00           N+0
HETATM   18  C   UNK     0      -1.276   1.144  -1.574  0.00  0.00           C+0
HETATM   19  O   UNK     0      -0.958   2.320  -1.535  0.00  0.00           O+0
HETATM   20  C   UNK     0      -1.419   0.189  -0.405  0.00  0.00           C+0
HETATM   21  C   UNK     0      -0.082  -0.428   0.018  0.00  0.00           C+0
HETATM   22  O   UNK     0      -0.049  -1.465   0.687  0.00  0.00           O+0
HETATM   23  C   UNK     0       1.209   0.266  -0.381  0.00  0.00           C+0
HETATM   24  C   UNK     0       2.377  -0.208   0.472  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.624   0.582   0.158  0.00  0.00           C+0
HETATM   26  O   UNK     0       4.313   0.324  -0.834  0.00  0.00           O+0
HETATM   27  C   UNK     0       3.993   1.746   1.095  0.00  0.00           C+0
HETATM   28  O   UNK     0       5.347   2.142   0.891  0.00  0.00           O+0
HETATM   29  C   UNK     0       3.099   2.939   0.844  0.00  0.00           C+0
HETATM   30  C   UNK     0       3.306   3.647  -0.477  0.00  0.00           C+0
HETATM   31  C   UNK     0       2.166   3.405   1.703  0.00  0.00           C+0
HETATM   32  C   UNK     0       1.796   2.870   3.072  0.00  0.00           C+0
HETATM   33  C   UNK     0       2.485   3.734   4.133  0.00  0.00           C+0
HETATM   34  C   UNK     0       0.267   2.897   3.291  0.00  0.00           C+0
HETATM   35  C   UNK     0      -0.474   1.783   2.595  0.00  0.00           C+0
HETATM   36  C   UNK     0      -1.202   1.940   1.477  0.00  0.00           C+0
HETATM   37  C   UNK     0      -2.048   0.831   0.848  0.00  0.00           C+0
HETATM   38  C   UNK     0      -3.478   1.351   0.565  0.00  0.00           C+0
HETATM   39  O   UNK     0      -4.119   1.632   1.815  0.00  0.00           O+0
HETATM   40  H   UNK     0      -6.003   1.724  -0.230  0.00  0.00           H+0
HETATM   41  H   UNK     0      -6.239   0.340   0.862  0.00  0.00           H+0
HETATM   42  H   UNK     0      -6.396   0.155  -0.896  0.00  0.00           H+0
HETATM   43  H   UNK     0      -4.913  -1.615  -2.472  0.00  0.00           H+0
HETATM   44  H   UNK     0      -5.650  -1.913  -0.883  0.00  0.00           H+0
HETATM   45  H   UNK     0      -4.199  -2.776  -1.333  0.00  0.00           H+0
HETATM   46  H   UNK     0      -2.105  -1.903  -0.585  0.00  0.00           H+0
HETATM   47  H   UNK     0      -2.827  -1.018  -3.184  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.051  -1.942  -2.237  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.443  -1.620  -3.906  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.474  -3.250  -5.119  0.00  0.00           H+0
HETATM   51  H   UNK     0      -3.049  -5.636  -4.626  0.00  0.00           H+0
HETATM   52  H   UNK     0      -2.677  -7.551  -2.611  0.00  0.00           H+0
HETATM   53  H   UNK     0      -1.601  -7.838  -0.387  0.00  0.00           H+0
HETATM   54  H   UNK     0      -0.375  -5.969   0.665  0.00  0.00           H+0
HETATM   55  H   UNK     0      -0.194  -3.784  -0.469  0.00  0.00           H+0
HETATM   56  H   UNK     0      -1.457   0.926  -3.639  0.00  0.00           H+0
HETATM   57  H   UNK     0       1.084   1.343  -0.260  0.00  0.00           H+0
HETATM   58  H   UNK     0       1.403   0.063  -1.440  0.00  0.00           H+0
HETATM   59  H   UNK     0       2.593  -1.267   0.288  0.00  0.00           H+0
HETATM   60  H   UNK     0       2.153  -0.121   1.540  0.00  0.00           H+0
HETATM   61  H   UNK     0       3.939   1.380   2.123  0.00  0.00           H+0
HETATM   62  H   UNK     0       5.593   1.804   0.007  0.00  0.00           H+0
HETATM   63  H   UNK     0       4.317   4.059  -0.541  0.00  0.00           H+0
HETATM   64  H   UNK     0       2.606   4.478  -0.616  0.00  0.00           H+0
HETATM   65  H   UNK     0       3.155   2.956  -1.313  0.00  0.00           H+0
HETATM   66  H   UNK     0       1.609   4.296   1.408  0.00  0.00           H+0
HETATM   67  H   UNK     0       2.144   1.839   3.196  0.00  0.00           H+0
HETATM   68  H   UNK     0       2.269   3.357   5.139  0.00  0.00           H+0
HETATM   69  H   UNK     0       2.149   4.776   4.085  0.00  0.00           H+0
HETATM   70  H   UNK     0       3.573   3.724   4.003  0.00  0.00           H+0
HETATM   71  H   UNK     0      -0.146   3.870   2.995  0.00  0.00           H+0
HETATM   72  H   UNK     0       0.049   2.797   4.363  0.00  0.00           H+0
HETATM   73  H   UNK     0      -0.439   0.810   3.085  0.00  0.00           H+0
HETATM   74  H   UNK     0      -1.227   2.915   0.990  0.00  0.00           H+0
HETATM   75  H   UNK     0      -2.144   0.043   1.614  0.00  0.00           H+0
HETATM   76  H   UNK     0      -3.455   2.285  -0.009  0.00  0.00           H+0
HETATM   77  H   UNK     0      -3.543   2.243   2.306  0.00  0.00           H+0
CONECT    1    2   40   41   42                                             
CONECT    2   38    1    3                                                  
CONECT    3    4    5    2                                                  
CONECT    4    3   43   44   45                                             
CONECT    5    6    3   20   46                                             
CONECT    6    5   17    7   47                                             
CONECT    7    6    8   48   49                                             
CONECT    8    7   16    9                                                  
CONECT    9   10    8   50                                                  
CONECT   10   11    9   51                                                  
CONECT   11   16   10   12                                                  
CONECT   12   13   11   52                                                  
CONECT   13   14   12   53                                                  
CONECT   14   15   13   54                                                  
CONECT   15   16   14   55                                                  
CONECT   16    8   11   15                                                  
CONECT   17    6   18   56                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   21    5   37   18                                             
CONECT   21   20   23   22                                                  
CONECT   22   21                                                            
CONECT   23   24   21   57   58                                             
CONECT   24   23   25   59   60                                             
CONECT   25   27   24   26                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29   61                                             
CONECT   28   27   62                                                       
CONECT   29   27   31   30                                                  
CONECT   30   29   63   64   65                                             
CONECT   31   29   32   66                                                  
CONECT   32   34   31   33   67                                             
CONECT   33   32   68   69   70                                             
CONECT   34   32   35   71   72                                             
CONECT   35   36   34   73                                                  
CONECT   36   37   35   74                                                  
CONECT   37   36   20   38   75                                             
CONECT   38    2   37   39   76                                             
CONECT   39   38   77                                                       
CONECT   40    1                                                            
CONECT   41    1                                                            
CONECT   42    1                                                            
CONECT   43    4                                                            
CONECT   44    4                                                            
CONECT   45    4                                                            
CONECT   46    5                                                            
CONECT   47    6                                                            
CONECT   48    7                                                            
CONECT   49    7                                                            
CONECT   50    9                                                            
CONECT   51   10                                                            
CONECT   52   12                                                            
CONECT   53   13                                                            
CONECT   54   14                                                            
CONECT   55   15                                                            
CONECT   56   17                                                            
CONECT   57   23                                                            
CONECT   58   23                                                            
CONECT   59   24                                                            
CONECT   60   24                                                            
CONECT   61   27                                                            
CONECT   62   28                                                            
CONECT   63   30                                                            
CONECT   64   30                                                            
CONECT   65   30                                                            
CONECT   66   31                                                            
CONECT   67   32                                                            
CONECT   68   33                                                            
CONECT   69   33                                                            
CONECT   70   33                                                            
CONECT   71   34                                                            
CONECT   72   34                                                            
CONECT   73   35                                                            
CONECT   74   36                                                            
CONECT   75   37                                                            
CONECT   76   38                                                            
CONECT   77   39                                                            
MASTER        0    0    0    0    0    0    0    0   77    0  162    0
END

RDKit          3D

77 81  0  0  0  0  0  0  0  0999 V2000
   -5.8269    0.6494   -0.1034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3463    0.3512   -0.1679 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8340   -0.7079   -0.8354 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7001   -1.8051   -1.4160 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3279   -0.9247   -1.0251 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9531   -0.8980   -2.5351 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8837   -1.9262   -2.9468 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4489   -3.3029   -3.1182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1741   -3.7505   -4.2068 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5175   -5.0570   -3.9898 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0302   -5.4810   -2.7768 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1410   -6.7282   -2.1499 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5336   -6.8827   -0.9011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8415   -5.8311   -0.3076 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7390   -4.5915   -0.9497 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.5038    0.4578   -2.7405 N   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.9578    2.3202   -1.5349 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4192    0.1892   -0.4047 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.0817   -0.4276    0.0182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0492   -1.4654    0.6872 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2094    0.2658   -0.3814 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3768   -0.2082    0.4715 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6242    0.5824    0.1583 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3134    0.3244   -0.8343 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9929    1.7463    1.0955 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.3468    2.1419    0.8912 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0989    2.9394    0.8436 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3056    3.6469   -0.4772 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1664    3.4047    1.7027 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7963    2.8702    3.0720 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.5732    3.7238    4.0034 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.5430    2.2429    2.3056 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₂H₃₈N₂O₅

Average Mass

530.6650 Da

Monoisotopic Mass

530.27807 Da

IUPAC Name

(3S,6S,6aR,10S,13S,17aR,17bR)-6,13-dihydroxy-3-[(1H-indol-3-yl)methyl]-4,5,10,12-tetramethyl-1H,2H,3H,6H,6aH,9H,10H,13H,14H,15H,16H,17H,17bH-cyclotrideca[e]isoindole-1,14,17-trione

Traditional Name

(3S,6S,6aR,10S,13S,17aR,17bR)-6,13-dihydroxy-3-(1H-indol-3-ylmethyl)-4,5,10,12-tetramethyl-2H,3H,6H,6aH,9H,10H,13H,15H,16H,17bH-cyclotrideca[e]isoindole-1,14,17-trione

CAS Registry Number

Not Available

SMILES

[H]O[C@]1([H])C(=C(C([H])([H])[H])[C@@]2([H])[C@@]([H])(N([H])C(=O)[C@]22C(=O)C([H])([H])C([H])([H])C(=O)[C@@]([H])(O[H])\C(=C([H])/[C@@]([H])(C([H])([H])[H])C([H])([H])\C([H])=C([H])\[C@@]12[H])C([H])([H])[H])C([H])([H])C1=C([H])N([H])C2=C1C([H])=C([H])C([H])=C2[H])C([H])([H])[H]

InChI Identifier

InChI=1S/C32H38N2O5/c1-17-8-7-10-23-30(38)20(4)19(3)28-25(15-21-16-33-24-11-6-5-9-22(21)24)34-31(39)32(23,28)27(36)13-12-26(35)29(37)18(2)14-17/h5-7,9-11,14,16-17,23,25,28-30,33,37-38H,8,12-13,15H2,1-4H3,(H,34,39)/b10-7+,18-14-/t17-,23-,25-,28-,29-,30+,32+/m0/s1

InChI Key

LXPGDDICGFGPQK-BAXSRCNJSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, CDCl₃, simulated)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Enterromorpha intestinalis	JEOL database	Iwamoto, C., et al, Tetrahedron 57, 2997 (2001)

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.08	ALOGPS
logP	3.52	ChemAxon
logS	-4.8	ALOGPS
pKa (Strongest Acidic)	12.79	ChemAxon
pKa (Strongest Basic)	-2.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	119.49 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	152.34 m³·mol⁻¹	ChemAxon
Polarizability	58.32 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Iwamoto, C., et al. (2001). Iwamoto, C., et al, Tetrahedron 57, 2997 (2001). Tetrahedron.

Showing NP-Card for Penochalasin H (NP0025369)

MOL for NP0025369 (Penochalasin H)

3D MOL for NP0025369 (Penochalasin H)

3D SDF for NP0025369 (Penochalasin H)

3D-SDF for NP0025369 (Penochalasin H)

PDB for NP0025369 (Penochalasin H)

3D PDB for NP0025369 (Penochalasin H)

SMILES for NP0025369 (Penochalasin H)

INCHI for NP0025369 (Penochalasin H)

Structure for NP0025369 (Penochalasin H)

3D Structure for NP0025369 (Penochalasin H)