Np mrd loader

Record Information
Version1.0
Created at2021-01-06 08:54:55 UTC
Updated at2021-07-15 17:42:58 UTC
NP-MRD IDNP0023886
Secondary Accession NumbersNone
Natural Product Identification
Common NameEnterocin EJ97
Provided ByNPAtlasNPAtlas Logo
Description Enterocin EJ97 is found in Enterococcus faecalis. It was first documented in 1998 (PMID: 9871020). Based on a literature review very few articles have been published on Enterocin EJ97 (PMID: 34230527) (PMID: 33679682) (PMID: 28515717) (PMID: 20385607) (PMID: 19375810) (PMID: 17901993).
Structure
Thumb
Synonyms
ValueSource
6-Amino-2-[(6-amino-2-{[2-({2-[(2-{[6-amino-2-({2-[(2-{[2-amino-1-hydroxy-4-(methylsulfanyl)butylidene]amino}-1-hydroxy-4-methylpentylidene)amino]-1-hydroxypropylidene}amino)-1-hydroxyhexylidene]amino}-1-hydroxyethylidene)amino]-1-hydroxy-4-(methylsulfanyl)butylidene}amino)-1-hydroxy-3-methylpentylidene]amino}-1-hydroxyhexylidene)amino]-N-[1-(2-{[1-(2-{[1-({2-hydroxy-1-[(4-methyl-1-oxopentan-2-yl)-C-hydroxycarbonimidoyl]propyl}-C-hydroxycarbonimidoyl)-2-(4-methylphenyl)ethyl]-C-hydroxycarbonimidoyl}pyrrolidin-1-yl)-3-(C-hydroxycarbonimidoyl)-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}pyrrolidin-1-yl)-1-oxo-3-phenylpropan-2-yl]hexanimidateGenerator
6-Amino-2-[(6-amino-2-{[2-({2-[(2-{[6-amino-2-({2-[(2-{[2-amino-1-hydroxy-4-(methylsulphanyl)butylidene]amino}-1-hydroxy-4-methylpentylidene)amino]-1-hydroxypropylidene}amino)-1-hydroxyhexylidene]amino}-1-hydroxyethylidene)amino]-1-hydroxy-4-(methylsulphanyl)butylidene}amino)-1-hydroxy-3-methylpentylidene]amino}-1-hydroxyhexylidene)amino]-N-[1-(2-{[1-(2-{[1-({2-hydroxy-1-[(4-methyl-1-oxopentan-2-yl)-C-hydroxycarbonimidoyl]propyl}-C-hydroxycarbonimidoyl)-2-(4-methylphenyl)ethyl]-C-hydroxycarbonimidoyl}pyrrolidin-1-yl)-3-(C-hydroxycarbonimidoyl)-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}pyrrolidin-1-yl)-1-oxo-3-phenylpropan-2-yl]hexanimidateGenerator
6-Amino-2-[(6-amino-2-{[2-({2-[(2-{[6-amino-2-({2-[(2-{[2-amino-1-hydroxy-4-(methylsulphanyl)butylidene]amino}-1-hydroxy-4-methylpentylidene)amino]-1-hydroxypropylidene}amino)-1-hydroxyhexylidene]amino}-1-hydroxyethylidene)amino]-1-hydroxy-4-(methylsulphanyl)butylidene}amino)-1-hydroxy-3-methylpentylidene]amino}-1-hydroxyhexylidene)amino]-N-[1-(2-{[1-(2-{[1-({2-hydroxy-1-[(4-methyl-1-oxopentan-2-yl)-C-hydroxycarbonimidoyl]propyl}-C-hydroxycarbonimidoyl)-2-(4-methylphenyl)ethyl]-C-hydroxycarbonimidoyl}pyrrolidin-1-yl)-3-(C-hydroxycarbonimidoyl)-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}pyrrolidin-1-yl)-1-oxo-3-phenylpropan-2-yl]hexanimidic acidGenerator
Chemical FormulaC88H144N20O18S2
Average Mass1834.3600 Da
Monoisotopic Mass1833.04089 Da
IUPAC Name(2R)-6-amino-N-({[(1R)-1-{[(1R,2R)-1-{[(1S)-5-amino-1-{[(1R)-5-amino-1-{[(2S)-1-[(2S)-2-{[(2R)-3-carbamoyl-1-[(2S)-2-[(1-{[(1R,2S)-2-hydroxy-1-{[(2S)-4-methyl-1-oxopentan-2-yl]carbamoyl}propyl]carbamoyl}-2-(4-methylphenyl)ethyl)carbamoyl]pyrrolidin-1-yl]-1-oxopropan-2-yl]carbamoyl}pyrrolidin-1-yl]-1-oxo-3-phenylpropan-2-yl]carbamoyl}pentyl]carbamoyl}pentyl]carbamoyl}-2-methylbutyl]carbamoyl}-3-(methylsulfanyl)propyl]carbamoyl}methyl)-2-[(2S)-2-[(2S)-2-[(2S)-2-amino-4-(methylsulfanyl)butanamido]-4-methylpentanamido]propanamido]hexanamide
Traditional Name(2R)-6-amino-N-({[(1R)-1-{[(1R,2R)-1-{[(1S)-5-amino-1-{[(1R)-5-amino-1-{[(2S)-1-[(2S)-2-{[(2R)-3-carbamoyl-1-[(2S)-2-[(1-{[(1R,2S)-2-hydroxy-1-{[(2S)-4-methyl-1-oxopentan-2-yl]carbamoyl}propyl]carbamoyl}-2-(4-methylphenyl)ethyl)carbamoyl]pyrrolidin-1-yl]-1-oxopropan-2-yl]carbamoyl}pyrrolidin-1-yl]-1-oxo-3-phenylpropan-2-yl]carbamoyl}pentyl]carbamoyl}pentyl]carbamoyl}-2-methylbutyl]carbamoyl}-3-(methylsulfanyl)propyl]carbamoyl}methyl)-2-[(2S)-2-[(2S)-2-[(2S)-2-amino-4-(methylsulfanyl)butanamido]-4-methylpentanamido]propanamido]hexanamide
CAS Registry NumberNot Available
SMILES
CCC(C)C(NC(=O)C(CCSC)NC(=O)CNC(=O)C(CCCCN)NC(=O)C(C)NC(=O)C(CC(C)C)NC(=O)C(N)CCSC)C(=O)NC(CCCCN)C(=O)NC(CCCCN)C(=O)NC(CC1=CC=CC=C1)C(=O)N1CCCC1C(=O)NC(CC(N)=O)C(=O)N1CCCC1C(=O)NC(CC1=CC=C(C)C=C1)C(=O)NC(C(C)O)C(=O)NC(CC(C)C)C=O
InChI Identifier
InChI=1S/C88H144N20O18S2/c1-12-54(7)73(105-80(118)64(36-43-128-11)97-72(112)49-94-77(115)61(26-16-19-37-89)98-75(113)55(8)95-81(119)65(45-52(4)5)101-76(114)60(92)35-42-127-10)85(123)100-63(28-18-21-39-91)78(116)99-62(27-17-20-38-90)79(117)103-67(47-57-24-14-13-15-25-57)87(125)107-40-23-30-70(107)84(122)104-68(48-71(93)111)88(126)108-41-22-29-69(108)83(121)102-66(46-58-33-31-53(6)32-34-58)82(120)106-74(56(9)110)86(124)96-59(50-109)44-51(2)3/h13-15,24-25,31-34,50-52,54-56,59-70,73-74,110H,12,16-23,26-30,35-49,89-92H2,1-11H3,(H2,93,111)(H,94,115)(H,95,119)(H,96,124)(H,97,112)(H,98,113)(H,99,116)(H,100,123)(H,101,114)(H,102,121)(H,103,117)(H,104,122)(H,105,118)(H,106,120)
InChI KeyGJEPXAJQTZPUNG-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Enterococcus faecalisNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2.6ChemAxon
pKa (Strongest Acidic)11.61ChemAxon
pKa (Strongest Basic)10.65ChemAxon
Physiological Charge4ChemAxon
Hydrogen Acceptor Count22ChemAxon
Hydrogen Donor Count19ChemAxon
Polar Surface Area603.39 ŲChemAxon
Rotatable Bond Count60ChemAxon
Refractivity485.07 m³·mol⁻¹ChemAxon
Polarizability197.78 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA010953
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78444182
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139586139
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Galvez A, Valdivia E, Abriouel H, Camafeita E, Mendez E, Martinez-Bueno M, Maqueda M: Isolation and characterization of enterocin EJ97, a bacteriocin produced by Enterococcus faecalis EJ97. Arch Microbiol. 1998 Dec;171(1):59-65. doi: 10.1007/s002030050678. [PubMed:9871020 ]
  2. Kranjec C, Kristensen SS, Bartkiewicz KT, Bronner M, Cavanagh JP, Srikantam A, Mathiesen G, Diep DB: A bacteriocin-based treatment option for Staphylococcus haemolyticus biofilms. Sci Rep. 2021 Jul 6;11(1):13909. doi: 10.1038/s41598-021-93158-z. [PubMed:34230527 ]
  3. Reinseth I, Tonnesen HH, Carlsen H, Diep DB: Exploring the Therapeutic Potenital of the Leaderless Enterocins K1 and EJ97 in the Treatment of Vancomycin-Resistant Enterococcal Infection. Front Microbiol. 2021 Feb 17;12:649339. doi: 10.3389/fmicb.2021.649339. eCollection 2021. [PubMed:33679682 ]
  4. Ovchinnikov KV, Kristiansen PE, Straume D, Jensen MS, Aleksandrzak-Piekarczyk T, Nes IF, Diep DB: The Leaderless Bacteriocin Enterocin K1 Is Highly Potent against Enterococcus faecium: A Study on Structure, Target Spectrum and Receptor. Front Microbiol. 2017 May 3;8:774. doi: 10.3389/fmicb.2017.00774. eCollection 2017. [PubMed:28515717 ]
  5. Neira JL, Contreras LM, de los Panos OR, Sanchez-Hidalgo M, Martinez-Bueno M, Maqueda M, Rico M: Structural characterisation of the natively unfolded enterocin EJ97. Protein Eng Des Sel. 2010 Jul;23(7):507-18. doi: 10.1093/protein/gzq020. Epub 2010 Apr 12. [PubMed:20385607 ]
  6. Martin-Platero AM, Valdivia E, Maqueda M, Martinez-Bueno M: Characterization and safety evaluation of enterococci isolated from Spanish goats' milk cheeses. Int J Food Microbiol. 2009 Jun 1;132(1):24-32. doi: 10.1016/j.ijfoodmicro.2009.03.010. Epub 2009 Mar 27. [PubMed:19375810 ]
  7. Lopez RL, Garcia MT, Abriouel H, Ben Omar N, Grande MJ, Martinez-Canamero M, Galvez A: Semi-preparative scale purification of enterococcal bacteriocin enterocin EJ97, and evaluation of substrates for its production. J Ind Microbiol Biotechnol. 2007 Dec;34(12):779-85. doi: 10.1007/s10295-007-0254-0. Epub 2007 Sep 28. [PubMed:17901993 ]
  8. Garcia MT, Lucas R, Abriouel H, Omar NB, Perez R, Grande MJ, Martinez-Canamero M, Galvez A: Antimicrobial activity of enterocin EJ97 against 'Bacillus macroides/Bacillus maroccanus' isolated from zucchini puree. J Appl Microbiol. 2004;97(4):731-7. doi: 10.1111/j.1365-2672.2004.02351.x. [PubMed:15357722 ]
  9. Garcia MT, Marinez Canamero M, Lucas R, Ben Omar N, Perez Pulido R, Galvez A: Inhibition of Listeria monocytogenes by enterocin EJ97 produced by Enterococcus faecalis EJ97. Int J Food Microbiol. 2004 Jan 15;90(2):161-70. doi: 10.1016/s0168-1605(03)00051-5. [PubMed:14698097 ]
  10. Sanchez-Hidalgo M, Maqueda M, Galvez A, Abriouel H, Valdivia E, Martinez-Bueno M: The genes coding for enterocin EJ97 production by Enterococcus faecalis EJ97 are located on a conjugative plasmid. Appl Environ Microbiol. 2003 Mar;69(3):1633-41. doi: 10.1128/AEM.69.3.1633-1641.2003. [PubMed:12620853 ]