NP-MRD: Showing NP-Card for Tenuecyclamide A (NP0023848)

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Record Information

Version

1.0

Created at

2021-01-06 08:53:00 UTC

Updated at

2021-07-15 17:42:51 UTC

NP-MRD ID

NP0023848

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Tenuecyclamide A

Provided By

NPAtlas

Description

Tenuecyclamide A is found in Nostoc, Nostoc spongiaeforme and Nostoc spongiaeforme var. tenue. It was first documented in 1998 (PMID: 9784161). Based on a literature review very few articles have been published on (4S,11S,18R)-4,7,11,18-tetramethyl-6-oxa-13,20-dithia-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1⁵,⁸.1¹²,¹⁵]Tetracosa-1(21),2,5(24),7,9,12(23),14,16,19(22)-nonaene-2,9,16-triol (PMID: 34352962) (PMID: 34352961) (PMID: 34352960) (PMID: 34352959).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242121053D          

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M  END

     RDKit          3D

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  Mrv1652306242121053D          

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   -2.0288    3.2671   -1.3128 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3279    2.6949   -1.9790 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0170    1.7190   -2.5635 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0044    0.9950   -1.2942 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 14 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 24 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
  6  2  2  0  0  0  0
 16 12  1  0  0  0  0
 26 22  1  0  0  0  0
 30  4  1  0  0  0  0
  1 32  1  0  0  0  0
  1 33  1  0  0  0  0
  1 34  1  0  0  0  0
  9 35  1  0  0  0  0
 10 36  1  6  0  0  0
 11 37  1  0  0  0  0
 11 38  1  0  0  0  0
 11 39  1  0  0  0  0
 15 40  1  0  0  0  0
 19 41  1  0  0  0  0
 20 42  1  1  0  0  0
 21 43  1  0  0  0  0
 21 44  1  0  0  0  0
 21 45  1  0  0  0  0
 25 46  1  0  0  0  0
 29 47  1  0  0  0  0
 30 48  1  6  0  0  0
 31 49  1  0  0  0  0
 31 50  1  0  0  0  0
 31 51  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0023848

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]N1C(=O)C2=C([H])SC(=N2)[C@]([H])(N([H])C(=O)C2=C([H])SC(=N2)[C@@]([H])(N([H])C(=O)C2=C(OC(=N2)[C@]1([H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C19H20N6O4S2/c1-7-17-25-13(10(4)29-17)16(28)22-9(3)19-24-12(6-31-19)15(27)21-8(2)18-23-11(5-30-18)14(26)20-7/h5-9H,1-4H3,(H,20,26)(H,21,27)(H,22,28)/t7-,8+,9-/m0/s1

> <INCHI_KEY>
VSHFFGIAFGCZHA-YIZRAAEISA-N

> <FORMULA>
C19H20N6O4S2

> <MOLECULAR_WEIGHT>
460.53

> <EXACT_MASS>
460.098745496

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
51

> <JCHEM_AVERAGE_POLARIZABILITY>
45.746382925195846

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(4S,11S,18R)-4,7,11,18-tetramethyl-6-oxa-13,20-dithia-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione

> <ALOGPS_LOGP>
2.05

> <JCHEM_LOGP>
0.9387497603333337

> <ALOGPS_LOGS>
-3.76

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.824505616346947

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.527676822022691

> <JCHEM_PKA_STRONGEST_BASIC>
-0.8151141220753096

> <JCHEM_POLAR_SURFACE_AREA>
139.11

> <JCHEM_REFRACTIVITY>
112.38569999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.10e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(4S,11S,18R)-4,7,11,18-tetramethyl-6-oxa-13,20-dithia-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 51 54  0  0  0  0  0  0  0  0999 V2000
   -5.2970    0.0596    0.9829 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8992    0.4665    0.6666 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5392    1.5452    0.0516 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2471    1.5657   -0.0459 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7560    0.4762    0.5182 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7708   -0.2572    0.9878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5528   -1.5325    1.6746 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3890   -1.7905    2.6073 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5475   -2.4643    1.4141 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1670   -3.0288    0.1391 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4843   -2.1811   -1.0418 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3117   -3.3650    0.1144 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2022   -2.6084   -0.4569 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4705   -2.9185   -0.4655 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7978   -4.1064    0.1745 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2653   -4.6544    0.7205 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.4713   -2.0325   -1.1268 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3766   -2.6445   -1.8029 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4678   -0.6172   -1.0470 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.3852    0.1747    0.1470 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3877   -0.2887    1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1399    1.6128   -0.2329 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0291    2.1712    0.1692 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7594    3.4176   -0.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7089    4.0827   -0.8797 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9019    2.8627   -1.0907 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.4924    4.0490    0.3382 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5421    5.2789    0.7211 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7436    3.3642    0.3783 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3588    2.6089   -0.6764 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4230    1.9615   -1.6416 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9158    0.9701    1.2292 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7332   -0.5010    0.1340 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3367   -0.5514    1.9289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9762   -2.8204    2.2429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7281   -4.0017    0.0032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5121   -1.7587   -0.9729 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5223   -2.8091   -1.9816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7095   -1.4161   -1.2549 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7675   -4.5931    0.3095 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5454   -0.0984   -1.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3768    0.1977    0.6988 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6584   -1.2835    1.5092 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3324   -0.1577    0.8541 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5206    0.3846    2.0485 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114    5.1265   -1.2500 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2908    3.4286    1.2992 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0288    3.2671   -1.3128 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3279    2.6949   -1.9790 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0170    1.7190   -2.5635 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0044    0.9950   -1.2942 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 14 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 24 27  1  0
 27 28  2  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
  6  2  2  0
 16 12  1  0
 26 22  1  0
 30  4  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  9 35  1  0
 10 36  1  6
 11 37  1  0
 11 38  1  0
 11 39  1  0
 15 40  1  0
 19 41  1  0
 20 42  1  1
 21 43  1  0
 21 44  1  0
 21 45  1  0
 25 46  1  0
 29 47  1  0
 30 48  1  6
 31 49  1  0
 31 50  1  0
 31 51  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.297   0.060   0.983  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.899   0.467   0.667  0.00  0.00           C+0
HETATM    3  O   UNK     0      -3.539   1.545   0.052  0.00  0.00           O+0
HETATM    4  C   UNK     0      -2.247   1.566  -0.046  0.00  0.00           C+0
HETATM    5  N   UNK     0      -1.756   0.476   0.518  0.00  0.00           N+0
HETATM    6  C   UNK     0      -2.771  -0.257   0.988  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.553  -1.533   1.675  0.00  0.00           C+0
HETATM    8  O   UNK     0      -3.389  -1.791   2.607  0.00  0.00           O+0
HETATM    9  N   UNK     0      -1.548  -2.464   1.414  0.00  0.00           N+0
HETATM   10  C   UNK     0      -1.167  -3.029   0.139  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.484  -2.181  -1.042  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.312  -3.365   0.114  0.00  0.00           C+0
HETATM   13  N   UNK     0       1.202  -2.608  -0.457  0.00  0.00           N+0
HETATM   14  C   UNK     0       2.470  -2.918  -0.466  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.798  -4.106   0.175  0.00  0.00           C+0
HETATM   16  S   UNK     0       1.265  -4.654   0.721  0.00  0.00           S+0
HETATM   17  C   UNK     0       3.471  -2.033  -1.127  0.00  0.00           C+0
HETATM   18  O   UNK     0       4.377  -2.644  -1.803  0.00  0.00           O+0
HETATM   19  N   UNK     0       3.468  -0.617  -1.047  0.00  0.00           N+0
HETATM   20  C   UNK     0       3.385   0.175   0.147  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.388  -0.289   1.157  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.140   1.613  -0.233  0.00  0.00           C+0
HETATM   23  N   UNK     0       2.029   2.171   0.169  0.00  0.00           N+0
HETATM   24  C   UNK     0       1.759   3.418  -0.129  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.709   4.083  -0.880  0.00  0.00           C+0
HETATM   26  S   UNK     0       3.902   2.863  -1.091  0.00  0.00           S+0
HETATM   27  C   UNK     0       0.492   4.049   0.338  0.00  0.00           C+0
HETATM   28  O   UNK     0       0.542   5.279   0.721  0.00  0.00           O+0
HETATM   29  N   UNK     0      -0.744   3.364   0.378  0.00  0.00           N+0
HETATM   30  C   UNK     0      -1.359   2.609  -0.676  0.00  0.00           C+0
HETATM   31  C   UNK     0      -0.423   1.962  -1.642  0.00  0.00           C+0
HETATM   32  H   UNK     0      -5.916   0.970   1.229  0.00  0.00           H+0
HETATM   33  H   UNK     0      -5.733  -0.501   0.134  0.00  0.00           H+0
HETATM   34  H   UNK     0      -5.337  -0.551   1.929  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.976  -2.820   2.243  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.728  -4.002   0.003  0.00  0.00           H+0
HETATM   37  H   UNK     0      -2.512  -1.759  -0.973  0.00  0.00           H+0
HETATM   38  H   UNK     0      -1.522  -2.809  -1.982  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.710  -1.416  -1.255  0.00  0.00           H+0
HETATM   40  H   UNK     0       3.768  -4.593   0.310  0.00  0.00           H+0
HETATM   41  H   UNK     0       3.545  -0.098  -1.974  0.00  0.00           H+0
HETATM   42  H   UNK     0       4.377   0.198   0.699  0.00  0.00           H+0
HETATM   43  H   UNK     0       2.658  -1.284   1.509  0.00  0.00           H+0
HETATM   44  H   UNK     0       1.332  -0.158   0.854  0.00  0.00           H+0
HETATM   45  H   UNK     0       2.521   0.385   2.049  0.00  0.00           H+0
HETATM   46  H   UNK     0       2.711   5.127  -1.250  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.291   3.429   1.299  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.029   3.267  -1.313  0.00  0.00           H+0
HETATM   49  H   UNK     0       0.328   2.695  -1.979  0.00  0.00           H+0
HETATM   50  H   UNK     0      -1.017   1.719  -2.563  0.00  0.00           H+0
HETATM   51  H   UNK     0      -0.004   0.995  -1.294  0.00  0.00           H+0
CONECT    1    2   32   33   34                                             
CONECT    2    1    3    6                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   30                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    2                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   35                                                  
CONECT   10    9   11   12   36                                             
CONECT   11   10   37   38   39                                             
CONECT   12   10   13   16                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   17                                                  
CONECT   15   14   16   40                                                  
CONECT   16   15   12                                                       
CONECT   17   14   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20   41                                                  
CONECT   20   19   21   22   42                                             
CONECT   21   20   43   44   45                                             
CONECT   22   20   23   26                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   27                                                  
CONECT   25   24   26   46                                                  
CONECT   26   25   22                                                       
CONECT   27   24   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30   47                                                  
CONECT   30   29   31    4   48                                             
CONECT   31   30   49   50   51                                             
CONECT   32    1                                                            
CONECT   33    1                                                            
CONECT   34    1                                                            
CONECT   35    9                                                            
CONECT   36   10                                                            
CONECT   37   11                                                            
CONECT   38   11                                                            
CONECT   39   11                                                            
CONECT   40   15                                                            
CONECT   41   19                                                            
CONECT   42   20                                                            
CONECT   43   21                                                            
CONECT   44   21                                                            
CONECT   45   21                                                            
CONECT   46   25                                                            
CONECT   47   29                                                            
CONECT   48   30                                                            
CONECT   49   31                                                            
CONECT   50   31                                                            
CONECT   51   31                                                            
MASTER        0    0    0    0    0    0    0    0   51    0  108    0
END

RDKit          3D

51 54  0  0  0  0  0  0  0  0999 V2000
   -5.2970    0.0596    0.9829 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8992    0.4665    0.6666 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5392    1.5452    0.0516 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2471    1.5657   -0.0459 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7560    0.4762    0.5182 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7708   -0.2572    0.9878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5528   -1.5325    1.6746 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3890   -1.7905    2.6073 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5475   -2.4643    1.4141 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1670   -3.0288    0.1391 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.4843   -2.1811   -1.0418 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3117   -3.3650    0.1144 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2022   -2.6084   -0.4569 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.4705   -2.9185   -0.4655 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7978   -4.1064    0.1745 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2653   -4.6544    0.7205 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.4713   -2.0325   -1.1268 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3766   -2.6445   -1.8029 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4678   -0.6172   -1.0470 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.3852    0.1747    0.1470 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3877   -0.2887    1.1574 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1399    1.6128   -0.2329 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0291    2.1712    0.1692 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.7594    3.4176   -0.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7089    4.0827   -0.8797 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9019    2.8627   -1.0907 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.4924    4.0490    0.3382 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5421    5.2789    0.7211 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7436    3.3642    0.3783 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3588    2.6089   -0.6764 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4230    1.9615   -1.6416 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9158    0.9701    1.2292 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7332   -0.5010    0.1340 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3367   -0.5514    1.9289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9762   -2.8204    2.2429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7281   -4.0017    0.0032 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5121   -1.7587   -0.9729 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5223   -2.8091   -1.9816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7095   -1.4161   -1.2549 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7675   -4.5931    0.3095 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5454   -0.0984   -1.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3768    0.1977    0.6988 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6584   -1.2835    1.5092 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3324   -0.1577    0.8541 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5206    0.3846    2.0485 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7114    5.1265   -1.2500 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2908    3.4286    1.2992 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0288    3.2671   -1.3128 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3279    2.6949   -1.9790 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0170    1.7190   -2.5635 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0044    0.9950   -1.2942 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 14 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 24 27  1  0
 27 28  2  0
 27 29  1  0
 29 30  1  0
 30 31  1  0
  6  2  2  0
 16 12  1  0
 26 22  1  0
 30  4  1  0
  1 32  1  0
  1 33  1  0
  1 34  1  0
  9 35  1  0
 10 36  1  6
 11 37  1  0
 11 38  1  0
 11 39  1  0
 15 40  1  0
 19 41  1  0
 20 42  1  1
 21 43  1  0
 21 44  1  0
 21 45  1  0
 25 46  1  0
 29 47  1  0
 30 48  1  6
 31 49  1  0
 31 50  1  0
 31 51  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₉H₂₀N₆O₄S₂

Average Mass

460.5300 Da

Monoisotopic Mass

460.09875 Da

IUPAC Name

(4S,11S,18R)-4,7,11,18-tetramethyl-6-oxa-13,20-dithia-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione

Traditional Name

(4S,11S,18R)-4,7,11,18-tetramethyl-6-oxa-13,20-dithia-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1^{5,8}.1^{12,15}]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione

CAS Registry Number

Not Available

SMILES

C[C@@H]1NC(=O)C2=CSC(=N2)[C@@H](C)NC(=O)C2=CSC(=N2)[C@H](C)NC(=O)C2=C(C)OC1=N2

InChI Identifier

InChI=1S/C19H20N6O4S2/c1-7-17-25-13(10(4)29-17)16(28)22-9(3)19-24-12(6-31-19)15(27)21-8(2)18-23-11(5-30-18)14(26)20-7/h5-9H,1-4H3,(H,20,26)(H,21,27)(H,22,28)/t7-,8+,9-/m0/s1

InChI Key

VSHFFGIAFGCZHA-YIZRAAEISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Nostoc	NPAtlas	9784161
Nostoc spongiaeforme	LOTUS Database	35616633
Nostoc spongiaeforme var. tenue	Bacteria	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.05	ALOGPS
logP	0.94	ChemAxon
logS	-3.8	ALOGPS
pKa (Strongest Acidic)	12.53	ChemAxon
pKa (Strongest Basic)	-0.82	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	139.11 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	112.39 m³·mol⁻¹	ChemAxon
Polarizability	45.75 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA017309

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9353755

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10837661

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Banker R, Carmeli S: Tenuecyclamides A-D, cyclic hexapeptides from the cyanobacterium Nostoc spongiaeforme var. tenue. J Nat Prod. 1998 Oct;61(10):1248-51. doi: 10.1021/np980138j. [PubMed:9784161 ]
Velazquez-Mujica J, Losco L, Aksoyler D, Chen HC: Perforator-to-perforator anastomosis as a salvage procedure during harvest of a perforator flap. Arch Plast Surg. 2021 Jul;48(4):467-469. doi: 10.5999/aps.2020.02194. Epub 2021 Jul 15. [PubMed:34352962 ]
Santamaria E, Nahas-Combina L, Altamirano-Arcos C, Vargas-Flores E: Seven steps to deliver a low-cost, efficient, and high-impact online plastic surgery course during COVID-19 confinement: master series microsurgery for residents' experience. Arch Plast Surg. 2021 Jul;48(4):462-466. doi: 10.5999/aps.2021.00360. Epub 2021 Jul 15. [PubMed:34352961 ]
Marchesi A, Garieri P, Amendola F, Marcelli S, Vaienti L: Intraoperative near-infrared spectroscopy for pedicled perforator flaps: a possible tool for the early detection of vascular issues. Arch Plast Surg. 2021 Jul;48(4):457-461. doi: 10.5999/aps.2019.00311. Epub 2021 Jul 15. [PubMed:34352960 ]
Oh D, Son D, Kim J, Kwon SY: Freeze-dried bovine amniotic membrane as a cell delivery scaffold in a porcine model of radiation-induced chronic wounds. Arch Plast Surg. 2021 Jul;48(4):448-456. doi: 10.5999/aps.2020.00997. Epub 2021 Jul 15. [PubMed:34352959 ]

Showing NP-Card for Tenuecyclamide A (NP0023848)

MOL for NP0023848 (Tenuecyclamide A)

3D MOL for NP0023848 (Tenuecyclamide A)

3D SDF for NP0023848 (Tenuecyclamide A)

3D-SDF for NP0023848 (Tenuecyclamide A)

PDB for NP0023848 (Tenuecyclamide A)

3D PDB for NP0023848 (Tenuecyclamide A)

SMILES for NP0023848 (Tenuecyclamide A)

INCHI for NP0023848 (Tenuecyclamide A)

Structure for NP0023848 (Tenuecyclamide A)

3D Structure for NP0023848 (Tenuecyclamide A)