NP-MRD: Showing NP-Card for Malyngamide N (NP0023687)

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Record Information

Version

2.0

Created at

2021-01-06 08:44:43 UTC

Updated at

2021-07-15 17:42:25 UTC

NP-MRD ID

NP0023687

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Malyngamide N

Provided By

NPAtlas

Description

Malyngamide N is found in Gracilaria coronopifolia and Unknown-fungus sp.. Malyngamide N was first documented in 1998 (PMID: 9548841). Based on a literature review very few articles have been published on (4E,7S)-N-[(2Z)-3-chloro-2-[(1S,6S)-3-methyl-2-oxo-7-oxabicyclo[4.1.0]Hept-3-en-1-yl]prop-2-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242120433D          

 72 73  0  0  0  0            999 V2000
   -5.9437   -3.0765   -2.3449 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2466   -2.5913   -1.7951 C   0  0  1  0  0  0  0  0  0  0  0  0
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 32 72  1  0  0  0  0
M  END

     RDKit          3D

 72 73  0  0  0  0  0  0  0  0999 V2000
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 17 57  1  0
 17 58  1  0
 17 59  1  0
 18 60  1  0
 18 61  1  0
 20 62  1  0
 24 63  1  1
 25 64  1  0
 25 65  1  0
 26 66  1  0
 28 67  1  0
 28 68  1  0
 28 69  1  0
 32 70  1  0
 32 71  1  0
 32 72  1  0
M  END


  Mrv1652306242120433D          

 72 73  0  0  0  0            999 V2000
   -5.9437   -3.0765   -2.3449 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2466   -2.5913   -1.7951 C   0  0  1  0  0  0  0  0  0  0  0  0
   -7.1583   -1.6392   -0.6493 C   0  0  2  0  0  0  0  0  0  0  0  0
   -6.4692   -0.3660   -0.8486 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.0437   -0.2795   -1.1407 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0769   -0.7737   -0.1291 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.1225   -0.0818    1.2045 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.8432    1.3701    1.2049 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4820    1.7452    0.6784 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.4137    1.1199    1.4915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5247    1.8534    2.1226 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5595    1.2237    2.9474 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8994    1.6184    2.4057 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0895    1.1913    1.0053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1792    0.5650    0.4232 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2847    1.4812    0.3169 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.3342    2.2059    0.9964 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4567    1.0786   -1.0507 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0312   -0.2848   -1.1674 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3286   -1.2384   -1.8187 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9813   -2.8544   -1.9717 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.3299   -0.7209   -0.6189 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2004   -1.9675    0.1160 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7111   -0.7902    0.6664 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.1621   -0.7940    1.0058 C   0  0  2  0  0  0  0  0  0  0  0  0
    8.0234   -1.3830   -0.0318 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6817   -1.3429   -1.2995 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5370   -1.9309   -2.3749 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4224   -0.7035   -1.6295 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2766   -0.1517   -2.7508 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7936    2.1781    0.6145 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3842    3.0686    1.5091 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1477   -3.0172   -1.5912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6804   -2.5309   -3.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9926   -4.1940   -2.5826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9077   -2.1852   -2.6211 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8147   -3.5321   -1.4971 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.7301    0.3568   -0.0062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0021    0.1483   -1.7207 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7943    0.8232   -1.2760 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7527   -0.7140   -2.1206 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0652   -1.8463    0.0733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0461   -0.5475   -0.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.3691   -0.5778    1.8518 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8185    1.6793    2.2953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3924    2.8454    0.7842 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3650    1.5318   -0.4008 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3670    0.0577    1.5646 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5155    2.9397    2.0901 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4920    1.5492    4.0043 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4108    0.1261    2.9316 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0589    2.6984    2.5666 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6727    1.1072    3.0484 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9979    3.2709    1.1597 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5208    1.8060    2.0119 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2678    2.2326    0.3923 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0996    1.8057   -1.5983 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4844    1.0938   -1.6097 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3606   -0.9734   -2.2379 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0762   -0.4868    1.5619 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3056   -1.3672    1.9520 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5214    0.2575    1.2135 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9692   -1.8712    0.2043 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6017   -1.6449   -2.2344 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3963   -3.0319   -2.3470 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1601   -1.5708   -3.3523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1234    3.6706    0.9648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7869    2.5149    2.3638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5508    3.7053    1.9018 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 22 19  1  1  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 29 30  2  0  0  0  0
  8 31  1  0  0  0  0
 31 32  1  0  0  0  0
 24 22  1  0  0  0  0
 29 22  1  0  0  0  0
  1 33  1  0  0  0  0
  1 34  1  0  0  0  0
  1 35  1  0  0  0  0
  2 36  1  0  0  0  0
  2 37  1  0  0  0  0
  3 38  1  0  0  0  0
  3 39  1  0  0  0  0
  4 40  1  0  0  0  0
  4 41  1  0  0  0  0
  5 42  1  0  0  0  0
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  6 44  1  0  0  0  0
  6 45  1  0  0  0  0
  7 46  1  0  0  0  0
  7 47  1  0  0  0  0
  8 48  1  1  0  0  0
  9 49  1  0  0  0  0
  9 50  1  0  0  0  0
 10 51  1  0  0  0  0
 11 52  1  0  0  0  0
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 32 70  1  0  0  0  0
 32 71  1  0  0  0  0
 32 72  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0023687

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]\C(Cl)=C(/C([H])([H])N(C(=O)C([H])([H])C([H])([H])C(\[H])=C(/[H])C([H])([H])[C@@]([H])(OC([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])C([H])([H])[H])[C@]12O[C@@]1([H])C([H])([H])C([H])=C(C2=O)C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C26H40ClNO4/c1-5-6-7-8-10-13-22(31-4)14-11-9-12-15-24(29)28(3)19-21(18-27)26-23(32-26)17-16-20(2)25(26)30/h9,11,16,18,22-23H,5-8,10,12-15,17,19H2,1-4H3/b11-9+,21-18-/t22-,23-,26-/m0/s1

> <INCHI_KEY>
NTWGVTHKTLNPTB-SERKONDUSA-N

> <FORMULA>
C26H40ClNO4

> <MOLECULAR_WEIGHT>
466.06

> <EXACT_MASS>
465.2645865

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
72

> <JCHEM_AVERAGE_POLARIZABILITY>
53.19216686050443

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(4E,7S)-N-[(2Z)-3-chloro-2-[(1S,6S)-3-methyl-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]prop-2-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide

> <ALOGPS_LOGP>
5.76

> <JCHEM_LOGP>
5.605216039

> <ALOGPS_LOGS>
-5.95

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-0.7286961270431592

> <JCHEM_POLAR_SURFACE_AREA>
59.14

> <JCHEM_REFRACTIVITY>
131.80029999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
15

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.22e-04 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(4E,7S)-N-[(2Z)-3-chloro-2-[(1S,6S)-3-methyl-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]prop-2-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 72 73  0  0  0  0  0  0  0  0999 V2000
   -5.9437   -3.0765   -2.3449 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2466   -2.5913   -1.7951 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1583   -1.6392   -0.6493 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.0769   -0.7737   -0.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1225   -0.0818    1.2045 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8432    1.3701    1.2049 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4820    1.7452    0.6784 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.0895    1.1913    1.0053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1792    0.5650    0.4232 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2847    1.4812    0.3169 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.3342    2.2059    0.9964 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4567    1.0786   -1.0507 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0312   -0.2848   -1.1674 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3286   -1.2384   -1.8187 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9813   -2.8544   -1.9717 Cl  0  0  0  0  0  0  0  0  0  0  0  0
    5.3299   -0.7209   -0.6189 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2004   -1.9675    0.1160 O   0  0  0  0  0  0  0  0  0  0  0  0
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    0.4920    1.5492    4.0043 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.6727    1.1072    3.0484 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9979    3.2709    1.1597 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5208    1.8060    2.0119 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2678    2.2326    0.3923 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0996    1.8057   -1.5983 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4844    1.0938   -1.6097 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3606   -0.9734   -2.2379 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0762   -0.4868    1.5619 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3056   -1.3672    1.9520 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5214    0.2575    1.2135 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9692   -1.8712    0.2043 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6017   -1.6449   -2.2344 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3963   -3.0319   -2.3470 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1601   -1.5708   -3.3523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1234    3.6706    0.9648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7869    2.5149    2.3638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5508    3.7053    1.9018 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 22 19  1  1
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  2  0
 27 28  1  0
 27 29  1  0
 29 30  2  0
  8 31  1  0
 31 32  1  0
 24 22  1  0
 29 22  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  2 36  1  0
  2 37  1  0
  3 38  1  0
  3 39  1  0
  4 40  1  0
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  8 48  1  1
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 10 51  1  0
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 28 69  1  0
 32 70  1  0
 32 71  1  0
 32 72  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.944  -3.076  -2.345  0.00  0.00           C+0
HETATM    2  C   UNK     0      -7.247  -2.591  -1.795  0.00  0.00           C+0
HETATM    3  C   UNK     0      -7.158  -1.639  -0.649  0.00  0.00           C+0
HETATM    4  C   UNK     0      -6.469  -0.366  -0.849  0.00  0.00           C+0
HETATM    5  C   UNK     0      -5.044  -0.280  -1.141  0.00  0.00           C+0
HETATM    6  C   UNK     0      -4.077  -0.774  -0.129  0.00  0.00           C+0
HETATM    7  C   UNK     0      -4.122  -0.082   1.204  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.843   1.370   1.205  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.482   1.745   0.678  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.414   1.120   1.492  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.525   1.853   2.123  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.560   1.224   2.947  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.899   1.618   2.406  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.090   1.191   1.005  0.00  0.00           C+0
HETATM   15  O   UNK     0       1.179   0.565   0.423  0.00  0.00           O+0
HETATM   16  N   UNK     0       3.285   1.481   0.317  0.00  0.00           N+0
HETATM   17  C   UNK     0       4.334   2.206   0.996  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.457   1.079  -1.051  0.00  0.00           C+0
HETATM   19  C   UNK     0       4.031  -0.285  -1.167  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.329  -1.238  -1.819  0.00  0.00           C+0
HETATM   21 Cl   UNK     0       3.981  -2.854  -1.972  0.00  0.00          Cl+0
HETATM   22  C   UNK     0       5.330  -0.721  -0.619  0.00  0.00           C+0
HETATM   23  O   UNK     0       5.200  -1.968   0.116  0.00  0.00           O+0
HETATM   24  C   UNK     0       5.711  -0.790   0.666  0.00  0.00           C+0
HETATM   25  C   UNK     0       7.162  -0.794   1.006  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.023  -1.383  -0.032  0.00  0.00           C+0
HETATM   27  C   UNK     0       7.682  -1.343  -1.300  0.00  0.00           C+0
HETATM   28  C   UNK     0       8.537  -1.931  -2.375  0.00  0.00           C+0
HETATM   29  C   UNK     0       6.422  -0.704  -1.630  0.00  0.00           C+0
HETATM   30  O   UNK     0       6.277  -0.152  -2.751  0.00  0.00           O+0
HETATM   31  O   UNK     0      -4.794   2.178   0.615  0.00  0.00           O+0
HETATM   32  C   UNK     0      -5.384   3.069   1.509  0.00  0.00           C+0
HETATM   33  H   UNK     0      -5.148  -3.017  -1.591  0.00  0.00           H+0
HETATM   34  H   UNK     0      -5.680  -2.531  -3.283  0.00  0.00           H+0
HETATM   35  H   UNK     0      -5.993  -4.194  -2.583  0.00  0.00           H+0
HETATM   36  H   UNK     0      -7.908  -2.185  -2.621  0.00  0.00           H+0
HETATM   37  H   UNK     0      -7.815  -3.532  -1.497  0.00  0.00           H+0
HETATM   38  H   UNK     0      -6.822  -2.226   0.239  0.00  0.00           H+0
HETATM   39  H   UNK     0      -8.237  -1.395  -0.376  0.00  0.00           H+0
HETATM   40  H   UNK     0      -6.730   0.357  -0.006  0.00  0.00           H+0
HETATM   41  H   UNK     0      -7.002   0.148  -1.721  0.00  0.00           H+0
HETATM   42  H   UNK     0      -4.794   0.823  -1.276  0.00  0.00           H+0
HETATM   43  H   UNK     0      -4.753  -0.714  -2.121  0.00  0.00           H+0
HETATM   44  H   UNK     0      -4.065  -1.846   0.073  0.00  0.00           H+0
HETATM   45  H   UNK     0      -3.046  -0.548  -0.541  0.00  0.00           H+0
HETATM   46  H   UNK     0      -5.102  -0.238   1.724  0.00  0.00           H+0
HETATM   47  H   UNK     0      -3.369  -0.578   1.852  0.00  0.00           H+0
HETATM   48  H   UNK     0      -3.818   1.679   2.295  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.392   2.845   0.784  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.365   1.532  -0.401  0.00  0.00           H+0
HETATM   51  H   UNK     0      -1.367   0.058   1.565  0.00  0.00           H+0
HETATM   52  H   UNK     0      -0.516   2.940   2.090  0.00  0.00           H+0
HETATM   53  H   UNK     0       0.492   1.549   4.004  0.00  0.00           H+0
HETATM   54  H   UNK     0       0.411   0.126   2.932  0.00  0.00           H+0
HETATM   55  H   UNK     0       2.059   2.698   2.567  0.00  0.00           H+0
HETATM   56  H   UNK     0       2.673   1.107   3.048  0.00  0.00           H+0
HETATM   57  H   UNK     0       3.998   3.271   1.160  0.00  0.00           H+0
HETATM   58  H   UNK     0       4.521   1.806   2.012  0.00  0.00           H+0
HETATM   59  H   UNK     0       5.268   2.233   0.392  0.00  0.00           H+0
HETATM   60  H   UNK     0       4.100   1.806  -1.598  0.00  0.00           H+0
HETATM   61  H   UNK     0       2.484   1.094  -1.610  0.00  0.00           H+0
HETATM   62  H   UNK     0       2.361  -0.973  -2.238  0.00  0.00           H+0
HETATM   63  H   UNK     0       5.076  -0.487   1.562  0.00  0.00           H+0
HETATM   64  H   UNK     0       7.306  -1.367   1.952  0.00  0.00           H+0
HETATM   65  H   UNK     0       7.521   0.258   1.214  0.00  0.00           H+0
HETATM   66  H   UNK     0       8.969  -1.871   0.204  0.00  0.00           H+0
HETATM   67  H   UNK     0       9.602  -1.645  -2.234  0.00  0.00           H+0
HETATM   68  H   UNK     0       8.396  -3.032  -2.347  0.00  0.00           H+0
HETATM   69  H   UNK     0       8.160  -1.571  -3.352  0.00  0.00           H+0
HETATM   70  H   UNK     0      -6.123   3.671   0.965  0.00  0.00           H+0
HETATM   71  H   UNK     0      -5.787   2.515   2.364  0.00  0.00           H+0
HETATM   72  H   UNK     0      -4.551   3.705   1.902  0.00  0.00           H+0
CONECT    1    2   33   34   35                                             
CONECT    2    1    3   36   37                                             
CONECT    3    2    4   38   39                                             
CONECT    4    3    5   40   41                                             
CONECT    5    4    6   42   43                                             
CONECT    6    5    7   44   45                                             
CONECT    7    6    8   46   47                                             
CONECT    8    7    9   31   48                                             
CONECT    9    8   10   49   50                                             
CONECT   10    9   11   51                                                  
CONECT   11   10   12   52                                                  
CONECT   12   11   13   53   54                                             
CONECT   13   12   14   55   56                                             
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   18                                                  
CONECT   17   16   57   58   59                                             
CONECT   18   16   19   60   61                                             
CONECT   19   18   20   22                                                  
CONECT   20   19   21   62                                                  
CONECT   21   20                                                            
CONECT   22   19   23   24   29                                             
CONECT   23   22   24                                                       
CONECT   24   23   25   22   63                                             
CONECT   25   24   26   64   65                                             
CONECT   26   25   27   66                                                  
CONECT   27   26   28   29                                                  
CONECT   28   27   67   68   69                                             
CONECT   29   27   30   22                                                  
CONECT   30   29                                                            
CONECT   31    8   32                                                       
CONECT   32   31   70   71   72                                             
CONECT   33    1                                                            
CONECT   34    1                                                            
CONECT   35    1                                                            
CONECT   36    2                                                            
CONECT   37    2                                                            
CONECT   38    3                                                            
CONECT   39    3                                                            
CONECT   40    4                                                            
CONECT   41    4                                                            
CONECT   42    5                                                            
CONECT   43    5                                                            
CONECT   44    6                                                            
CONECT   45    6                                                            
CONECT   46    7                                                            
CONECT   47    7                                                            
CONECT   48    8                                                            
CONECT   49    9                                                            
CONECT   50    9                                                            
CONECT   51   10                                                            
CONECT   52   11                                                            
CONECT   53   12                                                            
CONECT   54   12                                                            
CONECT   55   13                                                            
CONECT   56   13                                                            
CONECT   57   17                                                            
CONECT   58   17                                                            
CONECT   59   17                                                            
CONECT   60   18                                                            
CONECT   61   18                                                            
CONECT   62   20                                                            
CONECT   63   24                                                            
CONECT   64   25                                                            
CONECT   65   25                                                            
CONECT   66   26                                                            
CONECT   67   28                                                            
CONECT   68   28                                                            
CONECT   69   28                                                            
CONECT   70   32                                                            
CONECT   71   32                                                            
CONECT   72   32                                                            
MASTER        0    0    0    0    0    0    0    0   72    0  146    0
END

RDKit          3D

72 73  0  0  0  0  0  0  0  0999 V2000
   -5.9437   -3.0765   -2.3449 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2466   -2.5913   -1.7951 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1583   -1.6392   -0.6493 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4692   -0.3660   -0.8486 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0437   -0.2795   -1.1407 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0769   -0.7737   -0.1291 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1225   -0.0818    1.2045 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8432    1.3701    1.2049 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.4820    1.7452    0.6784 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4137    1.1199    1.4915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5247    1.8534    2.1226 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5595    1.2237    2.9474 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8994    1.6184    2.4057 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0895    1.1913    1.0053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1792    0.5650    0.4232 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2847    1.4812    0.3169 N   0  0  0  0  0  0  0  0  0  0  0  0
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    4.0312   -0.2848   -1.1674 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3286   -1.2384   -1.8187 C   0  0  0  0  0  0  0  0  0  0  0  0
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    5.3299   -0.7209   -0.6189 C   0  0  2  0  0  0  0  0  0  0  0  0
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    6.2766   -0.1517   -2.7508 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7936    2.1781    0.6145 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3842    3.0686    1.5091 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1477   -3.0172   -1.5912 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6804   -2.5309   -3.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9926   -4.1940   -2.5826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9077   -2.1852   -2.6211 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8147   -3.5321   -1.4971 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8217   -2.2262    0.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2367   -1.3950   -0.3764 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7301    0.3568   -0.0062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0021    0.1483   -1.7207 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7943    0.8232   -1.2760 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7527   -0.7140   -2.1206 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0652   -1.8463    0.0733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0461   -0.5475   -0.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.8185    1.6793    2.2953 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.9979    3.2709    1.1597 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.2678    2.2326    0.3923 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0996    1.8057   -1.5983 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4844    1.0938   -1.6097 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3606   -0.9734   -2.2379 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0762   -0.4868    1.5619 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3056   -1.3672    1.9520 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5214    0.2575    1.2135 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.9692   -1.8712    0.2043 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.6017   -1.6449   -2.2344 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3963   -3.0319   -2.3470 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1601   -1.5708   -3.3523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1234    3.6706    0.9648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7869    2.5149    2.3638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5508    3.7053    1.9018 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 22 19  1  1
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  2  0
 27 28  1  0
 27 29  1  0
 29 30  2  0
  8 31  1  0
 31 32  1  0
 24 22  1  0
 29 22  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  2 36  1  0
  2 37  1  0
  3 38  1  0
  3 39  1  0
  4 40  1  0
  4 41  1  0
  5 42  1  0
  5 43  1  0
  6 44  1  0
  6 45  1  0
  7 46  1  0
  7 47  1  0
  8 48  1  1
  9 49  1  0
  9 50  1  0
 10 51  1  0
 11 52  1  0
 12 53  1  0
 12 54  1  0
 13 55  1  0
 13 56  1  0
 17 57  1  0
 17 58  1  0
 17 59  1  0
 18 60  1  0
 18 61  1  0
 20 62  1  0
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 25 64  1  0
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 28 69  1  0
 32 70  1  0
 32 71  1  0
 32 72  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₆H₄₀ClNO₄

Average Mass

466.0600 Da

Monoisotopic Mass

465.26459 Da

IUPAC Name

(4E,7S)-N-[(2Z)-3-chloro-2-[(1S,6S)-3-methyl-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]prop-2-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide

Traditional Name

(4E,7S)-N-[(2Z)-3-chloro-2-[(1S,6S)-3-methyl-2-oxo-7-oxabicyclo[4.1.0]hept-3-en-1-yl]prop-2-en-1-yl]-7-methoxy-N-methyltetradec-4-enamide

CAS Registry Number

Not Available

SMILES

CCCCCCC[C@@H](C\C=C\CCC(=O)N(C)C\C(=C\Cl)[C@]12O[C@H]1CC=C(C)C2=O)OC

InChI Identifier

InChI=1S/C26H40ClNO4/c1-5-6-7-8-10-13-22(31-4)14-11-9-12-15-24(29)28(3)19-21(18-27)26-23(32-26)17-16-20(2)25(26)30/h9,11,16,18,22-23H,5-8,10,12-15,17,19H2,1-4H3/b11-9+,21-18-/t22-,23-,26-/m0/s1

InChI Key

NTWGVTHKTLNPTB-SERKONDUSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Gracilaria coronopifolia	--	KNApSAcK
Unknown-fungus sp.	NPAtlas	9548841

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.76	ALOGPS
logP	5.61	ChemAxon
logS	-6	ALOGPS
pKa (Strongest Basic)	-0.73	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	59.14 Å²	ChemAxon
Rotatable Bond Count	15	ChemAxon
Refractivity	131.8 m³·mol⁻¹	ChemAxon
Polarizability	53.19 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA013464

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8703580

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10528184

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Kan Y, Fujita T, Nagai H, Sakamoto B, Hokama Y: Malyngamides M and N from the Hawaiian Red Alga Gracilaria coronopifolia J Nat Prod. 1998 Jan 23;61(1):152-5. doi: 10.1021/np970423n. [PubMed:9548841 ]

Showing NP-Card for Malyngamide N (NP0023687)

MOL for NP0023687 (Malyngamide N)

3D MOL for NP0023687 (Malyngamide N)

3D SDF for NP0023687 (Malyngamide N)

3D-SDF for NP0023687 (Malyngamide N)

PDB for NP0023687 (Malyngamide N)

3D PDB for NP0023687 (Malyngamide N)

SMILES for NP0023687 (Malyngamide N)

INCHI for NP0023687 (Malyngamide N)

Structure for NP0023687 (Malyngamide N)

3D Structure for NP0023687 (Malyngamide N)