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Record Information
Version2.0
Created at2021-01-06 08:28:04 UTC
Updated at2021-07-15 17:41:36 UTC
NP-MRD IDNP0023381
Secondary Accession NumbersNone
Natural Product Identification
Common NameTMC-1 B
Provided ByNPAtlasNPAtlas Logo
DescriptionTmc-1b is also known as TMC 1 b. Tmc-1b is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. TMC-1 B is found in Streptomyces sp. A-230. Based on a literature review very few articles have been published on Tmc-1b.
Structure
Data?1624507322
Synonyms
ValueSource
TMC 1 bMeSH
TMC-1 bMeSH
Chemical FormulaC28H36N2O7
Average Mass512.6030 Da
Monoisotopic Mass512.25225 Da
IUPAC Name(2E,6S)-N-[(3S,4R)-3,4-dihydroxy-3-[(1E,3E,5E)-6-[(2-hydroxy-5-oxocyclopent-1-en-1-yl)carbamoyl]hexa-1,3,5-trien-1-yl]-6-oxocyclohex-1-en-1-yl]-2,6-dimethyloct-2-enamide
Traditional Name(2E,6S)-N-[(3S,4R)-3,4-dihydroxy-3-[(1E,3E,5E)-6-[(2-hydroxy-5-oxocyclopent-1-en-1-yl)carbamoyl]hexa-1,3,5-trien-1-yl]-6-oxocyclohex-1-en-1-yl]-2,6-dimethyloct-2-enamide
CAS Registry NumberNot Available
SMILES
CCC(C)CC\C=C(/C)C(=O)NC1=C[C@@](O)(\C=C\C=C\C=C\C(=O)NC2=C(O)CCC2=O)[C@H](O)CC1=O
InChI Identifier
InChI=1S/C28H36N2O7/c1-4-18(2)10-9-11-19(3)27(36)29-20-17-28(37,24(34)16-23(20)33)15-8-6-5-7-12-25(35)30-26-21(31)13-14-22(26)32/h5-8,11-12,15,17-18,24,31,34,37H,4,9-10,13-14,16H2,1-3H3,(H,29,36)(H,30,35)/b6-5+,12-7+,15-8+,19-11+/t18?,24-,28+/m1/s1
InChI KeyLTZQMADYCMVTKI-UVJPKDHBSA-N
Experimental Spectra
Not Available
Predicted Spectra
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces sp. A-230NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.61ALOGPS
logP1.84ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)9.04ChemAxon
pKa (Strongest Basic)-2.8ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area153.03 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity146.98 m³·mol⁻¹ChemAxon
Polarizability57.88 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA000925
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID8656920
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10481513
PDB IDNot Available
ChEBI ID66235
Good Scents IDNot Available
References
General References