Np mrd loader

Record Information
Version1.0
Created at2021-01-06 07:50:06 UTC
Updated at2021-07-15 17:39:35 UTC
NP-MRD IDNP0022640
Secondary Accession NumbersNone
Natural Product Identification
Common NameRPI-856 C/D
Provided ByNPAtlasNPAtlas Logo
Description RPI-856 C/D is found in Streptomyces. It was first documented in 1994 (PMID: 8040053). Based on a literature review very few articles have been published on (2S)-2-{[(2S)-2-(3-{[(2S)-2-[(2-{[(2S)-2-amino-1-hydroxy-3-methylbutylidene]amino}-2-(3,5-dihydroxyphenyl)-1-hydroxyethylidene)amino]-1-hydroxy-4-methylpentylidene]amino}-2-oxo-4-phenylbutanamido)-1-hydroxy-3-methylbutylidene]amino}-3-methylbutanoic acid.
Structure
Thumb
Synonyms
ValueSource
(2S)-2-{[(2S)-2-(3-{[(2S)-2-[(2-{[(2S)-2-amino-1-hydroxy-3-methylbutylidene]amino}-2-(3,5-dihydroxyphenyl)-1-hydroxyethylidene)amino]-1-hydroxy-4-methylpentylidene]amino}-2-oxo-4-phenylbutanamido)-1-hydroxy-3-methylbutylidene]amino}-3-methylbutanoateGenerator
Valyl-adpaa-leucyl-aopba--valyl-valineMeSH
RPI 856 DMeSH
RPI-856 DMeSH
RPI-856 CMeSH
Valyl-(2-amino-2-(3,5-dihydroxyphenyl)-acetic acid)-leucyl-(3-amino-2-oxo-4-phenylbutyric acid)-valyl-valineMeSH
Val-adpaa-leu-aopba-val-valMeSH
RPI 856 CMeSH
Chemical FormulaC39H56N6O10
Average Mass768.9090 Da
Monoisotopic Mass768.40579 Da
IUPAC Name(2S)-2-[(2S)-2-[(3S)-3-[(2S)-2-[(2S)-2-[(2S)-2-amino-3-methylbutanamido]-2-(3,5-dihydroxyphenyl)acetamido]-4-methylpentanamido]-2-oxo-4-phenylbutanamido]-3-methylbutanamido]-3-methylbutanoic acid
Traditional Name(2S)-2-[(2S)-2-[(3S)-3-[(2S)-2-[(2S)-2-[(2S)-2-amino-3-methylbutanamido]-2-(3,5-dihydroxyphenyl)acetamido]-4-methylpentanamido]-2-oxo-4-phenylbutanamido]-3-methylbutanamido]-3-methylbutanoic acid
CAS Registry NumberNot Available
SMILES
CC(C)C[C@H](NC(=O)C(NC(=O)[C@@H](N)C(C)C)C1=CC(O)=CC(O)=C1)C(=O)NC(CC1=CC=CC=C1)C(=O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C(C)C)C(O)=O
InChI Identifier
InChI=1S/C39H56N6O10/c1-19(2)14-28(42-37(52)32(45-35(50)29(40)20(3)4)24-16-25(46)18-26(47)17-24)34(49)41-27(15-23-12-10-9-11-13-23)33(48)38(53)43-30(21(5)6)36(51)44-31(22(7)8)39(54)55/h9-13,16-22,27-32,46-47H,14-15,40H2,1-8H3,(H,41,49)(H,42,52)(H,43,53)(H,44,51)(H,45,50)(H,54,55)/t27?,28-,29-,30-,31-,32?/m0/s1
InChI KeyVRJLRNCZYOXNGS-BHBQUVKGSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
StreptomycesNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.49ALOGPS
logP1.1ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)3.45ChemAxon
pKa (Strongest Basic)8.16ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count11ChemAxon
Hydrogen Donor Count9ChemAxon
Polar Surface Area266.35 ŲChemAxon
Rotatable Bond Count20ChemAxon
Refractivity201.44 m³·mol⁻¹ChemAxon
Polarizability82.55 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA016801
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID401230
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound455665
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Asano T, Matsuoka K, Hida T, Kobayashi M, Kitamura Y, Hayakawa T, Iinuma S, Kakinuma A, Kato K: Novel retrovirus protease inhibitors, RPI-856 A, B, C and D, produced by Streptomyces sp. AL-322. J Antibiot (Tokyo). 1994 May;47(5):557-65. doi: 10.7164/antibiotics.47.557. [PubMed:8040053 ]