Np mrd loader

Record Information
Version1.0
Created at2021-01-06 07:26:02 UTC
Updated at2021-07-15 17:38:27 UTC
NP-MRD IDNP0022216
Secondary Accession NumbersNone
Natural Product Identification
Common NamePhevalin
Provided ByNPAtlasNPAtlas Logo
DescriptionPhevalin is also known as aureusimine b. Phevalin is a secondary metabolite. Secondary metabolites are metabolically or physiologically non-essential metabolites that may serve a role as defense or signalling molecules. In some cases they are simply molecules that arise from the incomplete metabolism of other secondary metabolites. Phevalin is found in Streptomyces griseus and Streptomyces sp.. It was first documented in 1995 (PMID: 7490226). Based on a literature review a significant number of articles have been published on phevalin (PMID: 22808288) (PMID: 23070851) (PMID: 15896956) (PMID: 23302043).
Structure
Data?1624507045
Synonyms
ValueSource
3-(1-Methylethyl)-6-(phenylmethyl)-2(1H)-pyrazinoneChEBI
6-Benzyl-3-(propan-2-yl)-1,2-dihydropyrazin-2-oneChEBI
6-Benzyl-3-isopropyl-1H-pyrazin-2-oneChEBI
6-Benzyl-3-propan-2-yl-1H-pyrazin-2-oneChEBI
Aureusimine bChEBI
PhevalinMeSH
6-Benzyl-3-isopropyl-2(1H)-pyrazinoneMeSH
Chemical FormulaC14H16N2O
Average Mass228.2950 Da
Monoisotopic Mass228.12626 Da
IUPAC Name6-benzyl-3-(propan-2-yl)-1,2-dihydropyrazin-2-one
Traditional Name6-benzyl-3-isopropyl-1H-pyrazin-2-one
CAS Registry NumberNot Available
SMILES
CC(C)C1=NC=C(CC2=CC=CC=C2)NC1=O
InChI Identifier
InChI=1S/C14H16N2O/c1-10(2)13-14(17)16-12(9-15-13)8-11-6-4-3-5-7-11/h3-7,9-10H,8H2,1-2H3,(H,16,17)
InChI KeyCZUORGWXUVRUMV-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces griseusLOTUS Database
Streptomyces sp.NPAtlas
Species Where Detected
Species NameSourceReference
Streptomyces sp. SC433KNApSAcK Database
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as pyrazines. These are compounds containing a pyrazine ring, which is a six-member aromatic heterocycle, that consists of two nitrogen atoms (at positions 1 and 4) and four carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassDiazines
Sub ClassPyrazines
Direct ParentPyrazines
Alternative Parents
Substituents
  • Benzenoid
  • Pyrazine
  • Monocyclic benzene moiety
  • Heteroaromatic compound
  • Lactam
  • Azacycle
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.78ALOGPS
logP2.78ChemAxon
logS-3.3ALOGPS
pKa (Strongest Acidic)11.04ChemAxon
pKa (Strongest Basic)0.43ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area41.46 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity68.71 m³·mol⁻¹ChemAxon
Polarizability25.54 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA003113
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00016595
Chemspider ID8551926
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound10376483
PDB IDNot Available
ChEBI ID167320
Good Scents IDNot Available
References
General References
  1. Alvarez ME, White CB, Gregory J, Kydd GC, Harris A, Sun HH, Gillum AM, Cooper R: Phevalin, a new calpain inhibitor, from a Streptomyces sp. J Antibiot (Tokyo). 1995 Oct;48(10):1165-7. doi: 10.7164/antibiotics.48.1165. [PubMed:7490226 ]
  2. Secor PR, Jennings LK, James GA, Kirker KR, Pulcini ED, McInnerney K, Gerlach R, Livinghouse T, Hilmer JK, Bothner B, Fleckman P, Olerud JE, Stewart PS: Phevalin (aureusimine B) production by Staphylococcus aureus biofilm and impacts on human keratinocyte gene expression. PLoS One. 2012;7(7):e40973. doi: 10.1371/journal.pone.0040973. Epub 2012 Jul 13. [PubMed:22808288 ]
  3. Wyatt MA, Mok MC, Junop M, Magarvey NA: Heterologous expression and structural characterisation of a pyrazinone natural product assembly line. Chembiochem. 2012 Nov 5;13(16):2408-15. doi: 10.1002/cbic.201200340. Epub 2012 Oct 15. [PubMed:23070851 ]
  4. Zeng Y, Li Q, Hanzlik RP, Aube J: Synthesis of a small library of diketopiperazines as potential inhibitors of calpain. Bioorg Med Chem Lett. 2005 Jun 15;15(12):3034-8. doi: 10.1016/j.bmcl.2005.04.031. [PubMed:15896956 ]
  5. Wilson DJ, Shi C, Teitelbaum AM, Gulick AM, Aldrich CC: Characterization of AusA: a dimodular nonribosomal peptide synthetase responsible for the production of aureusimine pyrazinones. Biochemistry. 2013 Feb 5;52(5):926-37. doi: 10.1021/bi301330q. Epub 2013 Jan 23. [PubMed:23302043 ]