NP-MRD: Showing NP-Card for Azicemicin B (NP0022206)

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Record Information

Version

2.0

Created at

2021-01-06 07:25:37 UTC

Updated at

2021-07-15 17:38:25 UTC

NP-MRD ID

NP0022206

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Azicemicin B

Provided By

NPAtlas

Description

Azicemicin B is found in Amycolatopsis and Amycolatopsis sp. Mj126-NF4. Based on a literature review very few articles have been published on Azicemicin B.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242105213D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306242105213D          

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    1.9270   -3.6120    0.8380 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5537   -2.1631    1.1156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3459   -3.1387   -1.4824 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4143   -2.9012   -0.0934 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7243   -1.0452   -2.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8525   -0.2472   -1.7963 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8908   -1.9586   -1.3183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7493   -1.2298    1.6170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0376   -1.4297    0.2667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1985    0.7463    1.0084 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6112    1.6651    0.8636 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8663    0.1314   -1.3628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5851    1.4967   -0.1727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8072    1.1326    1.6298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2484    1.1848   -1.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  8 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 12 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  1  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 23 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
 31 32  1  6  0  0  0
 16  3  1  0  0  0  0
 31 21  1  0  0  0  0
 15  7  1  0  0  0  0
 27 25  1  0  0  0  0
 31 11  1  0  0  0  0
  1 33  1  0  0  0  0
  1 34  1  0  0  0  0
  1 35  1  0  0  0  0
  5 36  1  0  0  0  0
  6 37  1  0  0  0  0
 10 38  1  0  0  0  0
 10 39  1  0  0  0  0
 10 40  1  0  0  0  0
 14 41  1  0  0  0  0
 17 42  1  0  0  0  0
 20 43  1  0  0  0  0
 20 44  1  0  0  0  0
 21 45  1  6  0  0  0
 22 46  1  0  0  0  0
 22 47  1  0  0  0  0
 24 48  1  0  0  0  0
 25 49  1  1  0  0  0
 26 50  1  0  0  0  0
 26 51  1  0  0  0  0
 27 52  1  0  0  0  0
 28 53  1  0  0  0  0
 28 54  1  0  0  0  0
 32 55  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0022206

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C(OC([H])([H])[H])C(O[H])=C2C(O[H])=C3C(=O)C([H])([H])[C@@]4([H])C([H])([H])[C@@](O[H])(C([H])([H])C(=O)[C@@]4(O[H])C3=C(OC([H])([H])[H])C2=C1[H])[C@]1([H])N([H])C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C22H23NO9/c1-31-19-9-4-11(25)20(32-2)18(28)14(9)17(27)15-10(24)3-8-5-21(29,12-7-23-12)6-13(26)22(8,30)16(15)19/h4,8,12,23,25,27-30H,3,5-7H2,1-2H3/t8-,12+,21+,22+/m0/s1

> <INCHI_KEY>
UYHQCZYRKRLVIT-UHFFFAOYSA-N

> <FORMULA>
C22H23NO9

> <MOLECULAR_WEIGHT>
445.424

> <EXACT_MASS>
445.137281325

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_ATOM_COUNT>
55

> <JCHEM_AVERAGE_POLARIZABILITY>
44.16941511595812

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3R,4aR,12bS)-3-[(2R)-aziridin-2-yl]-3,7,8,10,12b-pentahydroxy-9,12-dimethoxy-1,2,3,4,4a,5,6,12b-octahydrotetraphene-1,6-dione

> <ALOGPS_LOGP>
0.34

> <JCHEM_LOGP>
0.04152827788790382

> <ALOGPS_LOGS>
-2.26

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
9.159282231702145

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.193976097071975

> <JCHEM_PKA_STRONGEST_BASIC>
6.996120630868671

> <JCHEM_POLAR_SURFACE_AREA>
175.69

> <JCHEM_REFRACTIVITY>
109.96399999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.42e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3R,4aR,12bS)-3-[(2R)-aziridin-2-yl]-3,7,8,10,12b-pentahydroxy-9,12-dimethoxy-2,4,4a,5-tetrahydrotetraphene-1,6-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 55 59  0  0  0  0  0  0  0  0999 V2000
    7.3486   -0.1955   -0.2751 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4116    0.1837    0.7122 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0777    0.3895    0.4467 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6312    1.6420    0.0838 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4850    2.7423   -0.0316 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2877    1.7881   -0.1695 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3804    0.7269   -0.0719 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0415    0.9215   -0.3355 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6643    2.2130   -0.6965 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2731    3.1783    0.2525 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1587   -0.1156   -0.2393 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6130   -1.3575    0.1228 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9489   -1.5751    0.3908 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4462   -2.7887    0.7506 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8505   -0.5083    0.2909 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2019   -0.6734    0.5498 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6049   -1.9521    0.9118 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3772   -2.4169    0.2190 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2071   -3.3360    1.0522 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5527   -2.4137   -0.6392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9691   -1.0740   -1.1418 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4714   -0.9573   -1.0615 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9831   -0.5816    0.2871 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6550   -1.4849    1.2906 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4947   -0.4602    0.1719 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.1582    0.7453    0.5789 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0228    0.4445   -0.8344 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4205    0.7759    0.6523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9252    0.5677    0.7264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3626    0.7852    1.7627 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2650    0.1000   -0.5215 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3348    1.1941   -1.4179 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0522   -0.9143    0.2017 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8975    0.7072   -0.6205 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8458   -0.7293   -1.1002 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4626    2.6730    0.1440 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9139    2.7506   -0.4534 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7712    4.1410    0.0156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8349    3.3697    0.2114 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5163    2.8633    1.2731 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9270   -3.6120    0.8380 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5537   -2.1631    1.1156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3459   -3.1387   -1.4824 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4143   -2.9012   -0.0934 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7243   -1.0452   -2.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8525   -0.2472   -1.7963 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8908   -1.9586   -1.3183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7493   -1.2298    1.6170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0376   -1.4297    0.2667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1985    0.7463    1.0084 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6112    1.6651    0.8636 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8663    0.1314   -1.3628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5851    1.4967   -0.1727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8072    1.1326    1.6298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2484    1.1848   -1.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  8 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 12 18  1  0
 18 19  2  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  1
 23 25  1  0
 25 26  1  0
 26 27  1  0
 23 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 31 32  1  6
 16  3  1  0
 31 21  1  0
 15  7  1  0
 27 25  1  0
 31 11  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  5 36  1  0
  6 37  1  0
 10 38  1  0
 10 39  1  0
 10 40  1  0
 14 41  1  0
 17 42  1  0
 20 43  1  0
 20 44  1  0
 21 45  1  6
 22 46  1  0
 22 47  1  0
 24 48  1  0
 25 49  1  1
 26 50  1  0
 26 51  1  0
 27 52  1  0
 28 53  1  0
 28 54  1  0
 32 55  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       7.349  -0.196  -0.275  0.00  0.00           C+0
HETATM    2  O   UNK     0       6.412   0.184   0.712  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.078   0.390   0.447  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.631   1.642   0.084  0.00  0.00           C+0
HETATM    5  O   UNK     0       5.485   2.742  -0.032  0.00  0.00           O+0
HETATM    6  C   UNK     0       3.288   1.788  -0.170  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.380   0.727  -0.072  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.042   0.922  -0.336  0.00  0.00           C+0
HETATM    9  O   UNK     0       0.664   2.213  -0.697  0.00  0.00           O+0
HETATM   10  C   UNK     0       0.273   3.178   0.253  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.159  -0.116  -0.239  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.613  -1.357   0.123  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.949  -1.575   0.391  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.446  -2.789   0.751  0.00  0.00           O+0
HETATM   15  C   UNK     0       2.850  -0.508   0.291  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.202  -0.673   0.550  0.00  0.00           C+0
HETATM   17  O   UNK     0       4.605  -1.952   0.912  0.00  0.00           O+0
HETATM   18  C   UNK     0      -0.377  -2.417   0.219  0.00  0.00           C+0
HETATM   19  O   UNK     0      -0.207  -3.336   1.052  0.00  0.00           O+0
HETATM   20  C   UNK     0      -1.553  -2.414  -0.639  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.969  -1.074  -1.142  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.471  -0.957  -1.062  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.983  -0.582   0.287  0.00  0.00           C+0
HETATM   24  O   UNK     0      -3.655  -1.485   1.291  0.00  0.00           O+0
HETATM   25  C   UNK     0      -5.495  -0.460   0.172  0.00  0.00           C+0
HETATM   26  C   UNK     0      -6.158   0.745   0.579  0.00  0.00           C+0
HETATM   27  N   UNK     0      -6.023   0.445  -0.834  0.00  0.00           N+0
HETATM   28  C   UNK     0      -3.421   0.776   0.652  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.925   0.568   0.726  0.00  0.00           C+0
HETATM   30  O   UNK     0      -1.363   0.785   1.763  0.00  0.00           O+0
HETATM   31  C   UNK     0      -1.265   0.100  -0.522  0.00  0.00           C+0
HETATM   32  O   UNK     0      -1.335   1.194  -1.418  0.00  0.00           O+0
HETATM   33  H   UNK     0       8.052  -0.914   0.202  0.00  0.00           H+0
HETATM   34  H   UNK     0       7.898   0.707  -0.621  0.00  0.00           H+0
HETATM   35  H   UNK     0       6.846  -0.729  -1.100  0.00  0.00           H+0
HETATM   36  H   UNK     0       6.463   2.673   0.144  0.00  0.00           H+0
HETATM   37  H   UNK     0       2.914   2.751  -0.453  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.771   4.141   0.016  0.00  0.00           H+0
HETATM   39  H   UNK     0      -0.835   3.370   0.211  0.00  0.00           H+0
HETATM   40  H   UNK     0       0.516   2.863   1.273  0.00  0.00           H+0
HETATM   41  H   UNK     0       1.927  -3.612   0.838  0.00  0.00           H+0
HETATM   42  H   UNK     0       5.554  -2.163   1.116  0.00  0.00           H+0
HETATM   43  H   UNK     0      -1.346  -3.139  -1.482  0.00  0.00           H+0
HETATM   44  H   UNK     0      -2.414  -2.901  -0.093  0.00  0.00           H+0
HETATM   45  H   UNK     0      -1.724  -1.045  -2.233  0.00  0.00           H+0
HETATM   46  H   UNK     0      -3.853  -0.247  -1.796  0.00  0.00           H+0
HETATM   47  H   UNK     0      -3.891  -1.959  -1.318  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.749  -1.230   1.617  0.00  0.00           H+0
HETATM   49  H   UNK     0      -6.038  -1.430   0.267  0.00  0.00           H+0
HETATM   50  H   UNK     0      -7.199   0.746   1.008  0.00  0.00           H+0
HETATM   51  H   UNK     0      -5.611   1.665   0.864  0.00  0.00           H+0
HETATM   52  H   UNK     0      -6.866   0.131  -1.363  0.00  0.00           H+0
HETATM   53  H   UNK     0      -3.585   1.497  -0.173  0.00  0.00           H+0
HETATM   54  H   UNK     0      -3.807   1.133   1.630  0.00  0.00           H+0
HETATM   55  H   UNK     0      -2.248   1.185  -1.798  0.00  0.00           H+0
CONECT    1    2   33   34   35                                             
CONECT    2    1    3                                                       
CONECT    3    2    4   16                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4   36                                                       
CONECT    6    4    7   37                                                  
CONECT    7    6    8   15                                                  
CONECT    8    7    9   11                                                  
CONECT    9    8   10                                                       
CONECT   10    9   38   39   40                                             
CONECT   11    8   12   31                                                  
CONECT   12   11   13   18                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13   41                                                       
CONECT   15   13   16    7                                                  
CONECT   16   15   17    3                                                  
CONECT   17   16   42                                                       
CONECT   18   12   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   43   44                                             
CONECT   21   20   22   31   45                                             
CONECT   22   21   23   46   47                                             
CONECT   23   22   24   25   28                                             
CONECT   24   23   48                                                       
CONECT   25   23   26   27   49                                             
CONECT   26   25   27   50   51                                             
CONECT   27   26   25   52                                                  
CONECT   28   23   29   53   54                                             
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32   21   11                                             
CONECT   32   31   55                                                       
CONECT   33    1                                                            
CONECT   34    1                                                            
CONECT   35    1                                                            
CONECT   36    5                                                            
CONECT   37    6                                                            
CONECT   38   10                                                            
CONECT   39   10                                                            
CONECT   40   10                                                            
CONECT   41   14                                                            
CONECT   42   17                                                            
CONECT   43   20                                                            
CONECT   44   20                                                            
CONECT   45   21                                                            
CONECT   46   22                                                            
CONECT   47   22                                                            
CONECT   48   24                                                            
CONECT   49   25                                                            
CONECT   50   26                                                            
CONECT   51   26                                                            
CONECT   52   27                                                            
CONECT   53   28                                                            
CONECT   54   28                                                            
CONECT   55   32                                                            
MASTER        0    0    0    0    0    0    0    0   55    0  118    0
END

RDKit          3D

55 59  0  0  0  0  0  0  0  0999 V2000
    7.3486   -0.1955   -0.2751 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4116    0.1837    0.7122 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0777    0.3895    0.4467 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6312    1.6420    0.0838 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4850    2.7423   -0.0316 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2877    1.7881   -0.1695 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3804    0.7269   -0.0719 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0415    0.9215   -0.3355 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6643    2.2130   -0.6965 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2731    3.1783    0.2525 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1587   -0.1156   -0.2393 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6130   -1.3575    0.1228 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9489   -1.5751    0.3908 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4462   -2.7887    0.7506 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8505   -0.5083    0.2909 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2019   -0.6734    0.5498 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6049   -1.9521    0.9118 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3772   -2.4169    0.2190 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2071   -3.3360    1.0522 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5527   -2.4137   -0.6392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9691   -1.0740   -1.1418 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4714   -0.9573   -1.0615 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9831   -0.5816    0.2871 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.6550   -1.4849    1.2906 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4947   -0.4602    0.1719 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.1582    0.7453    0.5789 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0228    0.4445   -0.8344 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4205    0.7759    0.6523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9252    0.5677    0.7264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3626    0.7852    1.7627 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2650    0.1000   -0.5215 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3348    1.1941   -1.4179 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0522   -0.9143    0.2017 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8975    0.7072   -0.6205 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8458   -0.7293   -1.1002 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4626    2.6730    0.1440 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9139    2.7506   -0.4534 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7712    4.1410    0.0156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8349    3.3697    0.2114 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5163    2.8633    1.2731 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9270   -3.6120    0.8380 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5537   -2.1631    1.1156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3459   -3.1387   -1.4824 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4143   -2.9012   -0.0934 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7243   -1.0452   -2.2328 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8525   -0.2472   -1.7963 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8908   -1.9586   -1.3183 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7493   -1.2298    1.6170 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0376   -1.4297    0.2667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1985    0.7463    1.0084 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6112    1.6651    0.8636 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8663    0.1314   -1.3628 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5851    1.4967   -0.1727 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8072    1.1326    1.6298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2484    1.1848   -1.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  8 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 13 15  1  0
 15 16  2  0
 16 17  1  0
 12 18  1  0
 18 19  2  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  1
 23 25  1  0
 25 26  1  0
 26 27  1  0
 23 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 31 32  1  6
 16  3  1  0
 31 21  1  0
 15  7  1  0
 27 25  1  0
 31 11  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  5 36  1  0
  6 37  1  0
 10 38  1  0
 10 39  1  0
 10 40  1  0
 14 41  1  0
 17 42  1  0
 20 43  1  0
 20 44  1  0
 21 45  1  6
 22 46  1  0
 22 47  1  0
 24 48  1  0
 25 49  1  1
 26 50  1  0
 26 51  1  0
 27 52  1  0
 28 53  1  0
 28 54  1  0
 32 55  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₂H₂₃NO₉

Average Mass

445.4240 Da

Monoisotopic Mass

445.13728 Da

IUPAC Name

(3R,4aR,12bS)-3-[(2R)-aziridin-2-yl]-3,7,8,10,12b-pentahydroxy-9,12-dimethoxy-1,2,3,4,4a,5,6,12b-octahydrotetraphene-1,6-dione

Traditional Name

(3R,4aR,12bS)-3-[(2R)-aziridin-2-yl]-3,7,8,10,12b-pentahydroxy-9,12-dimethoxy-2,4,4a,5-tetrahydrotetraphene-1,6-dione

CAS Registry Number

Not Available

SMILES

COC1=C(O)C=C2C(OC)=C3C(C(=O)CC4CC(O)(CC(=O)C34O)C3CN3)=C(O)C2=C1O

InChI Identifier

InChI=1S/C22H23NO9/c1-31-19-9-4-11(25)20(32-2)18(28)14(9)17(27)15-10(24)3-8-5-21(29,12-7-23-12)6-13(26)22(8,30)16(15)19/h4,8,12,23,25,27-30H,3,5-7H2,1-2H3

InChI Key

UYHQCZYRKRLVIT-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Amycolatopsis	NPAtlas	7490223
Amycolatopsis sp. Mj126-NF4	Bacteria	KNApSAcK

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.34	ALOGPS
logP	0.042	ChemAxon
logS	-2.3	ALOGPS
pKa (Strongest Acidic)	8.19	ChemAxon
pKa (Strongest Basic)	7	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	175.69 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	109.96 m³·mol⁻¹	ChemAxon
Polarizability	44.17 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA004525

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00016469

Chemspider ID

2333643

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

3074821

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Azicemicin B (NP0022206)

MOL for NP0022206 (Azicemicin B)

3D MOL for NP0022206 (Azicemicin B)

3D SDF for NP0022206 (Azicemicin B)

3D-SDF for NP0022206 (Azicemicin B)

PDB for NP0022206 (Azicemicin B)

3D PDB for NP0022206 (Azicemicin B)

SMILES for NP0022206 (Azicemicin B)

INCHI for NP0022206 (Azicemicin B)

Structure for NP0022206 (Azicemicin B)

3D Structure for NP0022206 (Azicemicin B)