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Record Information
Version2.0
Created at2021-01-06 07:09:39 UTC
Updated at2021-07-15 17:37:38 UTC
NP-MRD IDNP0021912
Secondary Accession NumbersNone
Natural Product Identification
Common NameMycoplanecin A
Provided ByNPAtlasNPAtlas Logo
Description Mycoplanecin A is found in Actinoplanes, Actinoplanes awajinensis and Actinoplanes awajinensis subsp. mycoplanecinus subsp. nov. No. 41042. Mycoplanecin A was first documented in 1983 (PMID: 6630066). Based on a literature review very few articles have been published on (2S,4S)-4-ethyl-N-methyl-1-[(2S)-3-methyl-2-(N-methyl-2-oxobutanamido)butanoyl]-N-[(3S,6S,9R,11R,15R,18S,19R,25S,28S)-8,17,24-trihydroxy-4,11,19,26-tetramethyl-6-(3-methylbutyl)-15,25-bis(2-methylpropyl)-2,5,14,21,27-pentaoxo-3-(propan-2-yl)-20-oxa-1,4,7,13,16,23,26-heptaazatricyclo[26.3.0.0⁹,¹³]Hentriaconta-7,16,23-trien-18-yl]pyrrolidine-2-carboxamide.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC61H102N10O13
Average Mass1183.5440 Da
Monoisotopic Mass1182.76278 Da
IUPAC Name(2S,4S)-4-ethyl-N-methyl-1-[(2S)-3-methyl-2-(N-methyl-2-oxobutanamido)butanoyl]-N-[(3S,6S,9R,11R,15R,18S,19R,25S,28S)-4,11,19,26-tetramethyl-6-(3-methylbutyl)-15,25-bis(2-methylpropyl)-2,5,8,14,17,21,24,27-octaoxo-3-(propan-2-yl)-20-oxa-1,4,7,13,16,23,26-heptaazatricyclo[26.3.0.0^{9,13}]hentriacontan-18-yl]pyrrolidine-2-carboxamide
Traditional Name(2S,4S)-4-ethyl-N-[(3S,6S,9R,11R,15R,18S,19R,25S,28S)-3-isopropyl-4,11,19,26-tetramethyl-6-(3-methylbutyl)-15,25-bis(2-methylpropyl)-2,5,8,14,17,21,24,27-octaoxo-20-oxa-1,4,7,13,16,23,26-heptaazatricyclo[26.3.0.0^{9,13}]hentriacontan-18-yl]-N-methyl-1-[(2S)-3-methyl-2-(N-methyl-2-oxobutanamido)butanoyl]pyrrolidine-2-carboxamide
CAS Registry NumberNot Available
SMILES
CC[C@H]1C[C@H](N(C1)C(=O)[C@H](C(C)C)N(C)C(=O)C(=O)CC)C(=O)N(C)[C@H]1[C@@H](C)OC(=O)CNC(=O)[C@H](CC(C)C)N(C)C(=O)[C@@H]2CCCN2C(=O)[C@H](C(C)C)N(C)C(=O)[C@H](CCC(C)C)NC(=O)[C@H]2C[C@@H](C)CN2C(=O)[C@@H](CC(C)C)NC1=O
InChI Identifier
InChI=1S/C61H102N10O13/c1-19-40-29-46(71(32-40)61(83)50(37(11)12)67(17)59(81)47(72)20-2)58(80)68(18)51-39(14)84-48(73)30-62-52(74)44(27-35(7)8)65(15)57(79)43-22-21-25-69(43)60(82)49(36(9)10)66(16)55(77)41(24-23-33(3)4)63-53(75)45-28-38(13)31-70(45)56(78)42(26-34(5)6)64-54(51)76/h33-46,49-51H,19-32H2,1-18H3,(H,62,74)(H,63,75)(H,64,76)/t38-,39-,40+,41+,42-,43+,44+,45-,46+,49+,50+,51+/m1/s1
InChI KeyICFLLAYTOVAMGO-ORZQNBSVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
ActinoplanesNPAtlas
Actinoplanes awajinensisLOTUS Database
Actinoplanes awajinensis subsp. mycoplanecinus subsp. nov. No. 41042Bacteria
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.86ALOGPS
logP3.74ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)11.76ChemAxon
pKa (Strongest Basic)-2.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area272.84 ŲChemAxon
Rotatable Bond Count16ChemAxon
Refractivity313.38 m³·mol⁻¹ChemAxon
Polarizability130.32 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA020945
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78443051
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139589051
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Nakajima M, Torikata A, Ichikawa Y, Katayama T, Shiraishi A, Haneishi T, Arai M: Mycoplanecins, novel antimycobacterial antibiotics from Actinoplanes awajinensis subsp. mycoplanecinus subsp. nov. II. Isolation, physico-chemical characterization and biological activities of mycoplanecin A. J Antibiot (Tokyo). 1983 Aug;36(8):961-6. doi: 10.7164/antibiotics.36.961. [PubMed:6630066 ]