NP-MRD: Showing NP-Card for Chelocardin (NP0021636)

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Record Information

Version

2.0

Created at

2021-01-06 06:55:05 UTC

Updated at

2021-07-15 17:36:52 UTC

NP-MRD ID

NP0021636

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Chelocardin

Provided By

NPAtlas

Description

Chelocardin is found in Amycolatopsis sulphurea and Nocardia. Chelocardin was first documented in 1970 (PMID: 5459200). Based on a literature review very few articles have been published on (1R,4aR,12aS)-3-acetyl-1-amino-4,4a,6,7-tetrahydroxy-8,11-dimethyl-1,2,4a,5,12,12a-hexahydrotetracene-2,5-dione.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242105173D          

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M  END

     RDKit          3D

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  Mrv1652306242105173D          

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   -0.9564   -0.6632   -1.9882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9145   -1.6250   -2.5870 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9677   -3.0079   -0.9632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3720   -3.4000   -1.2447 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  6  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 12 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 29 30  2  0  0  0  0
 29  4  1  0  0  0  0
 26  7  1  0  0  0  0
 23 11  1  0  0  0  0
 22 15  1  0  0  0  0
  1 31  1  0  0  0  0
  1 32  1  0  0  0  0
  1 33  1  0  0  0  0
  6 34  1  0  0  0  0
  8 35  1  0  0  0  0
 14 36  1  0  0  0  0
 14 37  1  0  0  0  0
 14 38  1  0  0  0  0
 16 39  1  0  0  0  0
 17 40  1  0  0  0  0
 19 41  1  0  0  0  0
 19 42  1  0  0  0  0
 19 43  1  0  0  0  0
 21 44  1  0  0  0  0
 24 45  1  0  0  0  0
 25 46  1  0  0  0  0
 25 47  1  0  0  0  0
 26 48  1  6  0  0  0
 27 49  1  6  0  0  0
 28 50  1  0  0  0  0
 28 51  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0021636

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C(C([H])=C([H])C2=C(C3=C(C(O[H])=C12)C(=O)[C@]1(O[H])C(O[H])=C(C(=O)C([H])([H])[H])C(=O)[C@]([H])(N([H])[H])[C@]1([H])C3([H])[H])C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C22H21NO7/c1-7-4-5-10-8(2)11-6-12-16(23)19(27)13(9(3)24)20(28)22(12,30)21(29)15(11)18(26)14(10)17(7)25/h4-5,12,16,25-26,28,30H,6,23H2,1-3H3/t12-,16+,22+/m0/s1

> <INCHI_KEY>
LUYXWZOOMKBUMB-ONJZCGHCSA-N

> <FORMULA>
C22H21NO7

> <MOLECULAR_WEIGHT>
411.41

> <EXACT_MASS>
411.13180202

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
51

> <JCHEM_AVERAGE_POLARIZABILITY>
40.98794515025305

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,4aR,12aS)-3-acetyl-1-amino-4,4a,6,7-tetrahydroxy-8,11-dimethyl-1,2,4a,5,12,12a-hexahydrotetracene-2,5-dione

> <ALOGPS_LOGP>
1.37

> <JCHEM_LOGP>
-0.20871044946139605

> <ALOGPS_LOGS>
-3.13

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
8.164963854310436

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.7647339877341639

> <JCHEM_PKA_STRONGEST_BASIC>
6.846030407087833

> <JCHEM_POLAR_SURFACE_AREA>
158.15

> <JCHEM_REFRACTIVITY>
108.97029999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.06e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,4aR,12aS)-3-acetyl-1-amino-4,4a,6,7-tetrahydroxy-8,11-dimethyl-12,12a-dihydro-1H-tetracene-2,5-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 51 54  0  0  0  0  0  0  0  0999 V2000
   -5.5877    1.6560    1.6292 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4319    0.6187    0.5872 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4358   -0.1047    0.3495 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2107    0.3812   -0.1733 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0959    1.0862    0.0006 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1087    2.1095    0.9727 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8935    0.8107   -0.7916 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9500    1.5020   -2.0022 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7372    1.3618   -0.0379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8471    2.4576    0.5222 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5234    0.6354    0.0536 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4435   -0.7647    0.0889 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5995   -1.4984    0.1868 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5488   -2.9543    0.2199 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8316   -0.8434    0.2499 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0226   -1.5280    0.3523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2435   -0.8644    0.4166 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3114    0.4907    0.3810 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5951    1.2422    0.4469 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1177    1.1918    0.2783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1055    2.5636    0.2369 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8890    0.5298    0.2135 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7304    1.3139    0.1133 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8093    2.6813    0.0762 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8956   -1.3311    0.0187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6653   -0.6448   -1.1242 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.8833   -1.3885   -1.5015 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9800   -2.6916   -0.8229 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1429   -0.6733   -1.1828 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1771   -0.9798   -1.7936 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9156    1.5388    2.4905 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6457    1.7630    1.9553 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3567    2.6465    1.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6410    1.8313    1.8505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0854    1.3272   -2.4839 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6312   -3.4286   -0.1669 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8747   -3.3876    1.1912 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3343   -3.3167   -0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9746   -2.6070    0.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1225   -1.4629    0.4948 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7120    1.7159    1.4519 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4427    0.5822    0.1920 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5645    2.0889   -0.2770 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9113    3.1513    0.2748 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0780    3.3228   -0.0074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0203   -2.3884   -0.0931 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4988   -1.0461    0.9348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9564   -0.6632   -1.9882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9145   -1.6250   -2.5870 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9677   -3.0079   -0.9632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3720   -3.4000   -1.2447 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  5  7  1  0
  7  8  1  6
  7  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 18 20  2  0
 20 21  1  0
 20 22  1  0
 22 23  2  0
 23 24  1  0
 12 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  2  0
 29  4  1  0
 26  7  1  0
 23 11  1  0
 22 15  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
  6 34  1  0
  8 35  1  0
 14 36  1  0
 14 37  1  0
 14 38  1  0
 16 39  1  0
 17 40  1  0
 19 41  1  0
 19 42  1  0
 19 43  1  0
 21 44  1  0
 24 45  1  0
 25 46  1  0
 25 47  1  0
 26 48  1  6
 27 49  1  6
 28 50  1  0
 28 51  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -5.588   1.656   1.629  0.00  0.00           C+0
HETATM    2  C   UNK     0      -5.432   0.619   0.587  0.00  0.00           C+0
HETATM    3  O   UNK     0      -6.436  -0.105   0.350  0.00  0.00           O+0
HETATM    4  C   UNK     0      -4.211   0.381  -0.173  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.096   1.086   0.001  0.00  0.00           C+0
HETATM    6  O   UNK     0      -3.109   2.110   0.973  0.00  0.00           O+0
HETATM    7  C   UNK     0      -1.894   0.811  -0.792  0.00  0.00           C+0
HETATM    8  O   UNK     0      -1.950   1.502  -2.002  0.00  0.00           O+0
HETATM    9  C   UNK     0      -0.737   1.362  -0.038  0.00  0.00           C+0
HETATM   10  O   UNK     0      -0.847   2.458   0.522  0.00  0.00           O+0
HETATM   11  C   UNK     0       0.523   0.635   0.054  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.444  -0.765   0.089  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.599  -1.498   0.187  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.549  -2.954   0.220  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.832  -0.843   0.250  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.023  -1.528   0.352  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.244  -0.864   0.417  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.311   0.491   0.381  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.595   1.242   0.447  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.118   1.192   0.278  0.00  0.00           C+0
HETATM   21  O   UNK     0       4.106   2.564   0.237  0.00  0.00           O+0
HETATM   22  C   UNK     0       2.889   0.530   0.214  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.730   1.314   0.113  0.00  0.00           C+0
HETATM   24  O   UNK     0       1.809   2.681   0.076  0.00  0.00           O+0
HETATM   25  C   UNK     0      -0.896  -1.331   0.019  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.665  -0.645  -1.124  0.00  0.00           C+0
HETATM   27  C   UNK     0      -2.883  -1.389  -1.502  0.00  0.00           C+0
HETATM   28  N   UNK     0      -2.980  -2.692  -0.823  0.00  0.00           N+0
HETATM   29  C   UNK     0      -4.143  -0.673  -1.183  0.00  0.00           C+0
HETATM   30  O   UNK     0      -5.177  -0.980  -1.794  0.00  0.00           O+0
HETATM   31  H   UNK     0      -4.916   1.539   2.490  0.00  0.00           H+0
HETATM   32  H   UNK     0      -6.646   1.763   1.955  0.00  0.00           H+0
HETATM   33  H   UNK     0      -5.357   2.647   1.144  0.00  0.00           H+0
HETATM   34  H   UNK     0      -2.641   1.831   1.851  0.00  0.00           H+0
HETATM   35  H   UNK     0      -1.085   1.327  -2.484  0.00  0.00           H+0
HETATM   36  H   UNK     0       0.631  -3.429  -0.167  0.00  0.00           H+0
HETATM   37  H   UNK     0       1.875  -3.388   1.191  0.00  0.00           H+0
HETATM   38  H   UNK     0       2.334  -3.317  -0.517  0.00  0.00           H+0
HETATM   39  H   UNK     0       3.975  -2.607   0.384  0.00  0.00           H+0
HETATM   40  H   UNK     0       6.122  -1.463   0.495  0.00  0.00           H+0
HETATM   41  H   UNK     0       6.712   1.716   1.452  0.00  0.00           H+0
HETATM   42  H   UNK     0       7.443   0.582   0.192  0.00  0.00           H+0
HETATM   43  H   UNK     0       6.564   2.089  -0.277  0.00  0.00           H+0
HETATM   44  H   UNK     0       4.911   3.151   0.275  0.00  0.00           H+0
HETATM   45  H   UNK     0       1.078   3.323  -0.007  0.00  0.00           H+0
HETATM   46  H   UNK     0      -1.020  -2.388  -0.093  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.499  -1.046   0.935  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.956  -0.663  -1.988  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.914  -1.625  -2.587  0.00  0.00           H+0
HETATM   50  H   UNK     0      -3.968  -3.008  -0.963  0.00  0.00           H+0
HETATM   51  H   UNK     0      -2.372  -3.400  -1.245  0.00  0.00           H+0
CONECT    1    2   31   32   33                                             
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5   29                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5   34                                                       
CONECT    7    5    8    9   26                                             
CONECT    8    7   35                                                       
CONECT    9    7   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   23                                                  
CONECT   12   11   13   25                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13   36   37   38                                             
CONECT   15   13   16   22                                                  
CONECT   16   15   17   39                                                  
CONECT   17   16   18   40                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18   41   42   43                                             
CONECT   20   18   21   22                                                  
CONECT   21   20   44                                                       
CONECT   22   20   23   15                                                  
CONECT   23   22   24   11                                                  
CONECT   24   23   45                                                       
CONECT   25   12   26   46   47                                             
CONECT   26   25   27    7   48                                             
CONECT   27   26   28   29   49                                             
CONECT   28   27   50   51                                                  
CONECT   29   27   30    4                                                  
CONECT   30   29                                                            
CONECT   31    1                                                            
CONECT   32    1                                                            
CONECT   33    1                                                            
CONECT   34    6                                                            
CONECT   35    8                                                            
CONECT   36   14                                                            
CONECT   37   14                                                            
CONECT   38   14                                                            
CONECT   39   16                                                            
CONECT   40   17                                                            
CONECT   41   19                                                            
CONECT   42   19                                                            
CONECT   43   19                                                            
CONECT   44   21                                                            
CONECT   45   24                                                            
CONECT   46   25                                                            
CONECT   47   25                                                            
CONECT   48   26                                                            
CONECT   49   27                                                            
CONECT   50   28                                                            
CONECT   51   28                                                            
MASTER        0    0    0    0    0    0    0    0   51    0  108    0
END

RDKit          3D

51 54  0  0  0  0  0  0  0  0999 V2000
   -5.5877    1.6560    1.6292 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4319    0.6187    0.5872 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4358   -0.1047    0.3495 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2107    0.3812   -0.1733 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0959    1.0862    0.0006 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1087    2.1095    0.9727 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8935    0.8107   -0.7916 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9500    1.5020   -2.0022 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7372    1.3618   -0.0379 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8471    2.4576    0.5222 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5234    0.6354    0.0536 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4435   -0.7647    0.0889 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5995   -1.4984    0.1868 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5488   -2.9543    0.2199 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8316   -0.8434    0.2499 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0226   -1.5280    0.3523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2435   -0.8644    0.4166 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3114    0.4907    0.3810 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5951    1.2422    0.4469 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1177    1.1918    0.2783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1055    2.5636    0.2369 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8890    0.5298    0.2135 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7304    1.3139    0.1133 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8093    2.6813    0.0762 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8956   -1.3311    0.0187 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6653   -0.6448   -1.1242 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.8833   -1.3885   -1.5015 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9800   -2.6916   -0.8229 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1429   -0.6733   -1.1828 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1771   -0.9798   -1.7936 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9156    1.5388    2.4905 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6457    1.7630    1.9553 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3567    2.6465    1.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6410    1.8313    1.8505 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0854    1.3272   -2.4839 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6312   -3.4286   -0.1669 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8747   -3.3876    1.1912 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3343   -3.3167   -0.5166 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9746   -2.6070    0.3843 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1225   -1.4629    0.4948 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7120    1.7159    1.4519 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4427    0.5822    0.1920 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5645    2.0889   -0.2770 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9113    3.1513    0.2748 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0780    3.3228   -0.0074 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0203   -2.3884   -0.0931 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4988   -1.0461    0.9348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9564   -0.6632   -1.9882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9145   -1.6250   -2.5870 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9677   -3.0079   -0.9632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3720   -3.4000   -1.2447 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  5  7  1  0
  7  8  1  6
  7  9  1  0
  9 10  2  0
  9 11  1  0
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 12 13  1  0
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 15 16  1  0
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 20 22  1  0
 22 23  2  0
 23 24  1  0
 12 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  2  0
 29  4  1  0
 26  7  1  0
 23 11  1  0
 22 15  1  0
  1 31  1  0
  1 32  1  0
  1 33  1  0
  6 34  1  0
  8 35  1  0
 14 36  1  0
 14 37  1  0
 14 38  1  0
 16 39  1  0
 17 40  1  0
 19 41  1  0
 19 42  1  0
 19 43  1  0
 21 44  1  0
 24 45  1  0
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 25 47  1  0
 26 48  1  6
 27 49  1  6
 28 50  1  0
 28 51  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
Chelocardin, hydrochloride, (4R-(4alpha,4abeta,12abeta))-isomer	MeSH
Chelocardin, monosodium salt, (4R-(4alpha,4abeta,12abeta))-isomer	MeSH
Abbott 40728	MeSH
Chelocardin	MeSH
Cetotetrine	MeSH
Chelocardin, (4alpha,4abeta,12abeta)-isomer	MeSH

Chemical Formula

C₂₂H₂₁NO₇

Average Mass

411.4100 Da

Monoisotopic Mass

411.13180 Da

IUPAC Name

(1R,4aR,12aS)-3-acetyl-1-amino-4,4a,6,7-tetrahydroxy-8,11-dimethyl-1,2,4a,5,12,12a-hexahydrotetracene-2,5-dione

Traditional Name

(1R,4aR,12aS)-3-acetyl-1-amino-4,4a,6,7-tetrahydroxy-8,11-dimethyl-12,12a-dihydro-1H-tetracene-2,5-dione

CAS Registry Number

Not Available

SMILES

CC(=O)C1=C(O)[C@]2(O)[C@@H](CC3=C(C)C4=C(C(O)=C(C)C=C4)C(O)=C3C2=O)[C@@H](N)C1=O

InChI Identifier

InChI=1S/C22H21NO7/c1-7-4-5-10-8(2)11-6-12-16(23)19(27)13(9(3)24)20(28)22(12,30)21(29)15(11)18(26)14(10)17(7)25/h4-5,12,16,25-26,28,30H,6,23H2,1-3H3/t12-,16+,22+/m0/s1

InChI Key

LUYXWZOOMKBUMB-ONJZCGHCSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Amycolatopsis sulphurea	LOTUS Database	35616633
Nocardia	NPAtlas	5459200

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.37	ALOGPS
logP	-0.21	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	0.76	ChemAxon
pKa (Strongest Basic)	6.85	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	158.15 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	108.97 m³·mol⁻¹	ChemAxon
Polarizability	40.99 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA018131

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

64494

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71402

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Mitscher LA, Juvarkar JV, Rosenbrook W Jr, Andres WW, Schenk J, Egan RS: Structure of chelocardin, a novel tetracycline antibiotic. J Am Chem Soc. 1970 Oct 7;92(20):6070-1. doi: 10.1021/ja00723a049. [PubMed:5459200 ]

Showing NP-Card for Chelocardin (NP0021636)

MOL for NP0021636 (Chelocardin)

3D MOL for NP0021636 (Chelocardin)

3D SDF for NP0021636 (Chelocardin)

3D-SDF for NP0021636 (Chelocardin)

PDB for NP0021636 (Chelocardin)

3D PDB for NP0021636 (Chelocardin)

SMILES for NP0021636 (Chelocardin)

INCHI for NP0021636 (Chelocardin)

Structure for NP0021636 (Chelocardin)

3D Structure for NP0021636 (Chelocardin)