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Record Information
Version2.0
Created at2021-01-06 06:24:14 UTC
Updated at2021-07-15 17:35:28 UTC
NP-MRD IDNP0021106
Secondary Accession NumbersNone
Natural Product Identification
Common NamePaulomycin E
Provided ByNPAtlasNPAtlas Logo
Description Paulomycin E is found in Streptomyces, Streptomyces paulus and Streptomyces paulus strain No.273. Paulomycin E was first documented in 1988 (PMID: 3356604). Based on a literature review very few articles have been published on (3R)-3-[(2S,3S,4S,5S,6S)-4-{[(2R,4R,5S,6R)-5-acetyl-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-6-[(acetyloxy)methyl]-3-hydroxy-5-{[(2Z)-2-isothiocyanatobut-2-enoyl]oxy}oxan-2-yl]-2,3-dihydroxy-6-imino-5-oxocyclohex-1-ene-1-carboxylic acid.
Structure
Thumb
Synonyms
ValueSource
(3R)-3-[(2S,3S,4S,5S,6S)-4-{[(2R,4R,5S,6R)-5-acetyl-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-6-[(acetyloxy)methyl]-3-hydroxy-5-{[(2Z)-2-isothiocyanatobut-2-enoyl]oxy}oxan-2-yl]-2,3-dihydroxy-6-imino-5-oxocyclohex-1-ene-1-carboxylateGenerator
Chemical FormulaC29H36N2O16S
Average Mass700.6700 Da
Monoisotopic Mass700.17855 Da
IUPAC Name(3R)-3-[(2S,3S,4S,5S,6S)-4-{[(2R,4R,5S,6R)-5-acetyl-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-6-[(acetyloxy)methyl]-3-hydroxy-5-{[(2Z)-2-isothiocyanatobut-2-enoyl]oxy}oxan-2-yl]-2,3-dihydroxy-6-imino-5-oxocyclohex-1-ene-1-carboxylic acid
Traditional Name(3R)-3-[(2S,3S,4S,5S,6S)-4-{[(2R,4R,5S,6R)-5-acetyl-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy}-6-[(acetyloxy)methyl]-3-hydroxy-5-{[(2Z)-2-isothiocyanatobut-2-enoyl]oxy}oxan-2-yl]-2,3-dihydroxy-6-imino-5-oxocyclohex-1-ene-1-carboxylic acid
CAS Registry NumberNot Available
SMILES
CO[C@@H]1C[C@H](O[C@H]2[C@H](O)[C@H](O[C@@H](COC(C)=O)[C@@H]2OC(=O)C(=C\C)\N=C=S)[C@]2(O)CC(=O)C(=N)C(C(O)=O)=C2O)O[C@H](C)[C@@]1(O)C(C)=O
InChI Identifier
InChI=1S/C29H36N2O16S/c1-6-14(31-10-48)27(39)47-22-16(9-43-13(4)33)45-25(28(40)8-15(34)20(30)19(24(28)36)26(37)38)21(35)23(22)46-18-7-17(42-5)29(41,11(2)32)12(3)44-18/h6,12,16-18,21-23,25,30,35-36,40-41H,7-9H2,1-5H3,(H,37,38)/b14-6-,30-20?/t12-,16+,17-,18+,21+,22+,23+,25+,28+,29+/m1/s1
InChI KeyYASNRWMRDSCJIV-STSZLFIVSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
StreptomycesNPAtlas
Streptomyces paulusLOTUS Database
Streptomyces paulus strain No.273Bacteria
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.65ALOGPS
logP-0.7ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)3.6ChemAxon
pKa (Strongest Basic)2.49ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count16ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area278.09 ŲChemAxon
Rotatable Bond Count13ChemAxon
Refractivity171.82 m³·mol⁻¹ChemAxon
Polarizability65.69 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA020802
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78442986
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139588982
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Argoudelis AD, Baczynskyj L, Haak WJ, Knoll WM, Mizsak SA, Shilliday FB: New paulomycins produced by Streptomyces paulus. J Antibiot (Tokyo). 1988 Feb;41(2):157-69. doi: 10.7164/antibiotics.41.157. [PubMed:3356604 ]