NP-MRD: Showing NP-Card for Porothramycin A (NP0020975)

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Record Information

Version

2.0

Created at

2021-01-06 06:17:48 UTC

Updated at

2021-07-15 17:35:08 UTC

NP-MRD ID

NP0020975

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Porothramycin A

Provided By

NPAtlas

Description

Porothramycin A is found in Streptomyces. Porothramycin A was first documented in 1988 (PMID: 3192492). Based on a literature review very few articles have been published on 3-{8-hydroxy-11-methoxy-2-oxo-3,9-diazatricyclo[8.4.0.0³,⁷]Tetradeca-1(10),4,11,13-tetraen-5-yl}-N,N-dimethylprop-2-enamide (PMID: 21877712).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242120403D          

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     RDKit          3D

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 22 46  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0020975

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])N([H])C2=C(C([H])=C([H])C([H])=C2OC([H])([H])[H])C(=O)N2C([H])=C(C([H])=C([H])C(=O)N(C([H])([H])[H])C([H])([H])[H])C([H])([H])[C@@]12[H]

> <INCHI_IDENTIFIER>
InChI=1S/C18H21N3O4/c1-20(2)15(22)8-7-11-9-13-17(23)19-16-12(18(24)21(13)10-11)5-4-6-14(16)25-3/h4-8,10,13,17,19,23H,9H2,1-3H3/b8-7-/t13-,17+/m0/s1

> <INCHI_KEY>
OQMYRVPMCIOFHL-UHFFFAOYSA-N

> <FORMULA>
C18H21N3O4

> <MOLECULAR_WEIGHT>
343.383

> <EXACT_MASS>
343.153206168

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
46

> <JCHEM_AVERAGE_POLARIZABILITY>
37.851867643024434

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-[(7S,8R)-8-hydroxy-11-methoxy-2-oxo-3,9-diazatricyclo[8.4.0.0^{3,7}]tetradeca-1(10),4,11,13-tetraen-5-yl]-N,N-dimethylprop-2-enamide

> <ALOGPS_LOGP>
0.99

> <JCHEM_LOGP>
0.6286296440000005

> <ALOGPS_LOGS>
-2.11

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.715635160254074

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.105879076550188

> <JCHEM_PKA_STRONGEST_BASIC>
-0.24732657664785151

> <JCHEM_POLAR_SURFACE_AREA>
82.10999999999999

> <JCHEM_REFRACTIVITY>
95.81029999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.66e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3-[(7S,8R)-8-hydroxy-11-methoxy-2-oxo-3,9-diazatricyclo[8.4.0.0^{3,7}]tetradeca-1(10),4,11,13-tetraen-5-yl]-N,N-dimethylprop-2-enamide

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 46 48  0  0  0  0  0  0  0  0999 V2000
   -7.0005   -0.6192   -0.4878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6378   -0.4327   -0.7367 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9241    0.5301   -0.0717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4799    1.3824    0.8804 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7382    2.3401    1.5322 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3874    2.4453    1.2151 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7868    1.6368    0.2899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5673    0.6775   -0.3521 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0678   -0.2171   -1.3274 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8333   -0.6032   -1.8883 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6085   -2.0009   -1.7128 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6008    0.1406   -1.6444 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4747   -0.9103   -1.2943 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4969   -0.1619   -0.5367 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8535   -0.4729   -0.2347 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0126   -0.7387    0.0234 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9297    0.1288    0.8202 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4087    1.2143    1.2317 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2554   -0.1773    1.1150 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.0267    0.8138    1.8927 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9822   -1.3638    0.7618 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9383    0.9806   -0.1027 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4370    1.0198   -0.5535 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3605    1.8816    0.0910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9399    2.9818    0.5541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4873   -1.2133   -1.2961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5347    0.3524   -0.4113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1773   -1.1456    0.4988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5283    1.2690    1.0972 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1882    2.9880    2.2674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7750    3.1867    1.7063 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8918   -0.7548   -1.7588 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0008   -0.5631   -3.0295 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9999   -2.2613   -0.8630 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1919    0.5940   -2.6087 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0100   -1.6108   -0.5517 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8785   -1.4023   -2.1774 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7289   -1.6772   -0.9287 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5603   -1.6589   -0.2845 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6621    0.8294    2.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1003    0.5897    1.8709 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8359    1.7741    1.4145 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0066   -1.1356    0.3869 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4322   -1.9888    0.0784 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1180   -1.9595    1.7184 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4336    1.7352    0.4818 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 19 21  1  0
 14 22  2  0
 22 23  1  0
 23 24  1  0
 24 25  2  0
  8  3  1  0
 23 12  1  0
 24  7  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  4 29  1  0
  5 30  1  0
  6 31  1  0
  9 32  1  0
 10 33  1  6
 11 34  1  0
 12 35  1  6
 13 36  1  0
 13 37  1  0
 15 38  1  0
 16 39  1  0
 20 40  1  0
 20 41  1  0
 20 42  1  0
 21 43  1  0
 21 44  1  0
 21 45  1  0
 22 46  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -7.000  -0.619  -0.488  0.00  0.00           C+0
HETATM    2  O   UNK     0      -5.638  -0.433  -0.737  0.00  0.00           O+0
HETATM    3  C   UNK     0      -4.924   0.530  -0.072  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.480   1.382   0.880  0.00  0.00           C+0
HETATM    5  C   UNK     0      -4.738   2.340   1.532  0.00  0.00           C+0
HETATM    6  C   UNK     0      -3.387   2.445   1.215  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.787   1.637   0.290  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.567   0.678  -0.352  0.00  0.00           C+0
HETATM    9  N   UNK     0      -3.068  -0.217  -1.327  0.00  0.00           N+0
HETATM   10  C   UNK     0      -1.833  -0.603  -1.888  0.00  0.00           C+0
HETATM   11  O   UNK     0      -1.609  -2.001  -1.713  0.00  0.00           O+0
HETATM   12  C   UNK     0      -0.601   0.141  -1.644  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.475  -0.910  -1.294  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.497  -0.162  -0.537  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.853  -0.473  -0.235  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.013  -0.739   0.023  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.930   0.129   0.820  0.00  0.00           C+0
HETATM   18  O   UNK     0       4.409   1.214   1.232  0.00  0.00           O+0
HETATM   19  N   UNK     0       6.255  -0.177   1.115  0.00  0.00           N+0
HETATM   20  C   UNK     0       7.027   0.814   1.893  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.982  -1.364   0.762  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.938   0.981  -0.103  0.00  0.00           C+0
HETATM   23  N   UNK     0      -0.437   1.020  -0.554  0.00  0.00           N+0
HETATM   24  C   UNK     0      -1.361   1.882   0.091  0.00  0.00           C+0
HETATM   25  O   UNK     0      -0.940   2.982   0.554  0.00  0.00           O+0
HETATM   26  H   UNK     0      -7.487  -1.213  -1.296  0.00  0.00           H+0
HETATM   27  H   UNK     0      -7.535   0.352  -0.411  0.00  0.00           H+0
HETATM   28  H   UNK     0      -7.177  -1.146   0.499  0.00  0.00           H+0
HETATM   29  H   UNK     0      -6.528   1.269   1.097  0.00  0.00           H+0
HETATM   30  H   UNK     0      -5.188   2.988   2.267  0.00  0.00           H+0
HETATM   31  H   UNK     0      -2.775   3.187   1.706  0.00  0.00           H+0
HETATM   32  H   UNK     0      -3.892  -0.755  -1.759  0.00  0.00           H+0
HETATM   33  H   UNK     0      -2.001  -0.563  -3.030  0.00  0.00           H+0
HETATM   34  H   UNK     0      -2.000  -2.261  -0.863  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.192   0.594  -2.609  0.00  0.00           H+0
HETATM   36  H   UNK     0       0.010  -1.611  -0.552  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.879  -1.402  -2.177  0.00  0.00           H+0
HETATM   38  H   UNK     0       2.729  -1.677  -0.929  0.00  0.00           H+0
HETATM   39  H   UNK     0       4.560  -1.659  -0.285  0.00  0.00           H+0
HETATM   40  H   UNK     0       6.662   0.829   2.925  0.00  0.00           H+0
HETATM   41  H   UNK     0       8.100   0.590   1.871  0.00  0.00           H+0
HETATM   42  H   UNK     0       6.836   1.774   1.415  0.00  0.00           H+0
HETATM   43  H   UNK     0       8.007  -1.136   0.387  0.00  0.00           H+0
HETATM   44  H   UNK     0       6.432  -1.989   0.078  0.00  0.00           H+0
HETATM   45  H   UNK     0       7.118  -1.960   1.718  0.00  0.00           H+0
HETATM   46  H   UNK     0       1.434   1.735   0.482  0.00  0.00           H+0
CONECT    1    2   26   27   28                                             
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5   29                                                  
CONECT    5    4    6   30                                                  
CONECT    6    5    7   31                                                  
CONECT    7    6    8   24                                                  
CONECT    8    7    9    3                                                  
CONECT    9    8   10   32                                                  
CONECT   10    9   11   12   33                                             
CONECT   11   10   34                                                       
CONECT   12   10   13   23   35                                             
CONECT   13   12   14   36   37                                             
CONECT   14   13   15   22                                                  
CONECT   15   14   16   38                                                  
CONECT   16   15   17   39                                                  
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20   21                                                  
CONECT   20   19   40   41   42                                             
CONECT   21   19   43   44   45                                             
CONECT   22   14   23   46                                                  
CONECT   23   22   24   12                                                  
CONECT   24   23   25    7                                                  
CONECT   25   24                                                            
CONECT   26    1                                                            
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    4                                                            
CONECT   30    5                                                            
CONECT   31    6                                                            
CONECT   32    9                                                            
CONECT   33   10                                                            
CONECT   34   11                                                            
CONECT   35   12                                                            
CONECT   36   13                                                            
CONECT   37   13                                                            
CONECT   38   15                                                            
CONECT   39   16                                                            
CONECT   40   20                                                            
CONECT   41   20                                                            
CONECT   42   20                                                            
CONECT   43   21                                                            
CONECT   44   21                                                            
CONECT   45   21                                                            
CONECT   46   22                                                            
MASTER        0    0    0    0    0    0    0    0   46    0   96    0
END

RDKit          3D

46 48  0  0  0  0  0  0  0  0999 V2000
   -7.0005   -0.6192   -0.4878 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6378   -0.4327   -0.7367 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9241    0.5301   -0.0717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4799    1.3824    0.8804 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7382    2.3401    1.5322 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3874    2.4453    1.2151 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7868    1.6368    0.2899 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5673    0.6775   -0.3521 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0678   -0.2171   -1.3274 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8333   -0.6032   -1.8883 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6085   -2.0009   -1.7128 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6008    0.1406   -1.6444 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.4747   -0.9103   -1.2943 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4969   -0.1619   -0.5367 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8535   -0.4729   -0.2347 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0126   -0.7387    0.0234 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9297    0.1288    0.8202 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4087    1.2143    1.2317 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2554   -0.1773    1.1150 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.0267    0.8138    1.8927 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9822   -1.3638    0.7618 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9383    0.9806   -0.1027 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4370    1.0198   -0.5535 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3605    1.8816    0.0910 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9399    2.9818    0.5541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4873   -1.2133   -1.2961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5347    0.3524   -0.4113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1773   -1.1456    0.4988 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5283    1.2690    1.0972 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1882    2.9880    2.2674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7750    3.1867    1.7063 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8918   -0.7548   -1.7588 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0008   -0.5631   -3.0295 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9999   -2.2613   -0.8630 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1919    0.5940   -2.6087 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0100   -1.6108   -0.5517 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8785   -1.4023   -2.1774 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7289   -1.6772   -0.9287 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5603   -1.6589   -0.2845 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6621    0.8294    2.9247 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.1003    0.5897    1.8709 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8359    1.7741    1.4145 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0066   -1.1356    0.3869 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4322   -1.9888    0.0784 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1180   -1.9595    1.7184 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4336    1.7352    0.4818 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
 19 20  1  0
 19 21  1  0
 14 22  2  0
 22 23  1  0
 23 24  1  0
 24 25  2  0
  8  3  1  0
 23 12  1  0
 24  7  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  4 29  1  0
  5 30  1  0
  6 31  1  0
  9 32  1  0
 10 33  1  6
 11 34  1  0
 12 35  1  6
 13 36  1  0
 13 37  1  0
 15 38  1  0
 16 39  1  0
 20 40  1  0
 20 41  1  0
 20 42  1  0
 21 43  1  0
 21 44  1  0
 21 45  1  0
 22 46  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₈H₂₁N₃O₄

Average Mass

343.3830 Da

Monoisotopic Mass

343.15321 Da

IUPAC Name

3-[(7S,8R)-8-hydroxy-11-methoxy-2-oxo-3,9-diazatricyclo[8.4.0.0^{3,7}]tetradeca-1(10),4,11,13-tetraen-5-yl]-N,N-dimethylprop-2-enamide

Traditional Name

3-[(7S,8R)-8-hydroxy-11-methoxy-2-oxo-3,9-diazatricyclo[8.4.0.0^{3,7}]tetradeca-1(10),4,11,13-tetraen-5-yl]-N,N-dimethylprop-2-enamide

CAS Registry Number

Not Available

SMILES

COC1=CC=CC2=C1NC(O)C1CC(C=CC(=O)N(C)C)=CN1C2=O

InChI Identifier

InChI=1S/C18H21N3O4/c1-20(2)15(22)8-7-11-9-13-17(23)19-16-12(18(24)21(13)10-11)5-4-6-14(16)25-3/h4-8,10,13,17,19,23H,9H2,1-3H3

InChI Key

OQMYRVPMCIOFHL-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	3192492

Species Where Detected

Species Name	Source	Reference
Streptomyces albus K731-113	KNApSAcK Database	22123792

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.99	ALOGPS
logP	0.63	ChemAxon
logS	-2.1	ALOGPS
pKa (Strongest Acidic)	10.11	ChemAxon
pKa (Strongest Basic)	-0.25	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	82.11 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	95.81 m³·mol⁻¹	ChemAxon
Polarizability	37.85 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA007051

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

78409931

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Tsunakawa M, Kamei H, Konishi M, Miyaki T, Oki T, Kawaguchi H: Porothramycin, a new antibiotic of the anthramycin group: production, isolation, structure and biological activity. J Antibiot (Tokyo). 1988 Oct;41(10):1366-73. doi: 10.7164/antibiotics.41.1366. [PubMed:3192492 ]
Vanderwal CD: Reactivity and synthesis inspired by the Zincke ring-opening of pyridines. J Org Chem. 2011 Dec 2;76(23):9555-67. doi: 10.1021/jo201625e. Epub 2011 Oct 20. [PubMed:21877712 ]

Showing NP-Card for Porothramycin A (NP0020975)

MOL for NP0020975 (Porothramycin A)

3D MOL for NP0020975 (Porothramycin A)

3D SDF for NP0020975 (Porothramycin A)

3D-SDF for NP0020975 (Porothramycin A)

PDB for NP0020975 (Porothramycin A)

3D PDB for NP0020975 (Porothramycin A)

SMILES for NP0020975 (Porothramycin A)

INCHI for NP0020975 (Porothramycin A)

Structure for NP0020975 (Porothramycin A)

3D Structure for NP0020975 (Porothramycin A)