NP-MRD: Showing NP-Card for Saccharonoic acid (NP0020458)

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Record Information

Version

2.0

Created at

2021-01-06 05:52:48 UTC

Updated at

2021-07-15 17:33:43 UTC

NP-MRD ID

NP0020458

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Saccharonoic acid

Provided By

NPAtlas

Description

Saccharonoic acid is also known as saccharonoate. Saccharonoic acid is found in Saccharothrix and Saccharothrix xinjiangensis. Saccharonoic acid was first documented in 2020 (PMID: 31451754). Based on a literature review very few articles have been published on Saccharonoic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242120303D          

 63 62  0  0  0  0            999 V2000
    3.0694    0.7956    1.7960 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6109   -0.0120    0.7155 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9713    0.1080    0.1973 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9063    0.9025    0.6343 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2601    0.9512    0.0383 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4923    0.1695   -0.9254 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2327    1.8168    0.5154 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.5439    1.8119   -0.1101 C   0  0  2  0  0  0  0  0  0  0  0  0
    9.4384    2.1678   -1.5504 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2878    2.4142   -2.0280 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.5410    2.2358   -2.3656 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

 63 62  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652306242120303D          

 63 62  0  0  0  0            999 V2000
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   -8.1679   -0.8798   -1.2920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8601    0.1833    0.8865 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9427    0.2719    2.7618 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.6750    1.5479    1.4710 H   0  0  0  0  0  0  0  0  0  0  0  0
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   10.0154    0.7812   -0.0777 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2302    2.4603    0.4288 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4762    2.8062   -3.2092 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2529   -1.4873   -0.7027 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4561   -2.3848    0.3327 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1349   -1.5727    1.7568 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7078   -0.0868    2.1722 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5176   -1.6201    2.5467 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0765   -1.4612   -1.6289 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8241    0.1973   -1.1652 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0970   -0.8853   -1.9563 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4822   -3.0565   -0.1911 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0915   -2.3126    0.2818 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7767   -2.9337   -1.3565 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.4853   -1.4044   -1.3142 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6078    0.6597   -0.2600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6741   -0.3088   -1.7284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9615   -2.3966   -0.4222 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -9.2686   -0.8151   -1.1430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9757   -1.7178   -1.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1242    0.3537    1.7081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8151    1.0828    0.2373 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8890    0.1576    1.3145 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
  2 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  2  0  0  0  0
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 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
  1 29  1  0  0  0  0
  3 30  1  0  0  0  0
  4 31  1  0  0  0  0
  7 32  1  0  0  0  0
  8 33  1  0  0  0  0
  8 34  1  0  0  0  0
 11 35  1  0  0  0  0
 12 36  1  0  0  0  0
 13 37  1  6  0  0  0
 14 38  1  0  0  0  0
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 15 41  1  0  0  0  0
 15 42  1  0  0  0  0
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 20 49  1  0  0  0  0
 20 50  1  0  0  0  0
 20 51  1  0  0  0  0
 21 52  1  0  0  0  0
 22 53  1  0  0  0  0
 22 54  1  0  0  0  0
 23 55  1  0  0  0  0
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 24 57  1  1  0  0  0
 25 58  1  0  0  0  0
 25 59  1  0  0  0  0
 25 60  1  0  0  0  0
 26 61  1  0  0  0  0
 26 62  1  0  0  0  0
 26 63  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0020458

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C([H])([H])N([H])C(=O)C(\[H])=C(/[H])\C(=C(/[H])[C@@]([H])(C([H])([H])[H])C([H])([H])[C@@]([H])(C([H])([H])[H])C([H])([H])C(=C(/[H])C([H])([H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])\C([H])([H])[H])\C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C22H37NO3/c1-16(2)8-7-9-17(3)12-19(5)14-20(6)13-18(4)10-11-21(24)23-15-22(25)26/h9-11,13,16,19-20H,7-8,12,14-15H2,1-6H3,(H,23,24)(H,25,26)/b11-10+,17-9+,18-13+/t19-,20+/m0/s1

> <INCHI_KEY>
IDHWXSORJXHAOU-AUAOHMEYSA-N

> <FORMULA>
C22H37NO3

> <MOLECULAR_WEIGHT>
363.542

> <EXACT_MASS>
363.277344055

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
63

> <JCHEM_AVERAGE_POLARIZABILITY>
45.20549068246686

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-[(2E,4E,8R,10E)-4,6,8,10,14-pentamethylpentadeca-2,4,10-trienamido]acetic acid

> <ALOGPS_LOGP>
5.52

> <JCHEM_LOGP>
5.328490881666667

> <ALOGPS_LOGS>
-5.50

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
16.09848978298087

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.85402467177886

> <JCHEM_PKA_STRONGEST_BASIC>
-0.48146059359912197

> <JCHEM_POLAR_SURFACE_AREA>
66.4

> <JCHEM_REFRACTIVITY>
110.8224

> <JCHEM_ROTATABLE_BOND_COUNT>
12

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.14e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(2E,4E,8R,10E)-4,6,8,10,14-pentamethylpentadeca-2,4,10-trienamido]acetic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 63 62  0  0  0  0  0  0  0  0999 V2000
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    3.6109   -0.0120    0.7155 C   0  0  0  0  0  0  0  0  0  0  0  0
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    9.5439    1.8119   -0.1101 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4384    2.1678   -1.5504 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2878    2.4142   -2.0280 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.5410    2.2358   -2.3656 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8285   -0.8854    0.1297 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.9066   -1.0804    1.7787 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.3210   -0.3026   -0.6522 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0899   -1.3933    0.0268 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5602   -1.0657    0.0843 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.1679   -0.8798   -1.2920 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.9427    0.2719    2.7618 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8489    1.5799    2.0704 H   0  0  0  0  0  0  0  0  0  0  0  0
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    5.2763   -0.5239   -0.6687 H   0  0  0  0  0  0  0  0  0  0  0  0
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    8.0625    2.4726    1.2987 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0154    0.7812   -0.0777 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2302    2.4603    0.4288 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4762    2.8062   -3.2092 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2529   -1.4873   -0.7027 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4561   -2.3848    0.3327 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.7078   -0.0868    2.1722 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5176   -1.6201    2.5467 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0765   -1.4612   -1.6289 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8241    0.1973   -1.1652 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.0915   -2.3126    0.2818 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7767   -2.9337   -1.3565 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0453    1.1335   -0.6132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1848    0.2742    0.8941 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -8.1467   -1.8923    0.5655 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -9.2686   -0.8151   -1.1430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9757   -1.7178   -1.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1242    0.3537    1.7081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8151    1.0828    0.2373 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8890    0.1576    1.3145 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
  2 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  2  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  3 30  1  0
  4 31  1  0
  7 32  1  0
  8 33  1  0
  8 34  1  0
 11 35  1  0
 12 36  1  0
 13 37  1  6
 14 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  0
 15 42  1  0
 16 43  1  6
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 18 48  1  0
 20 49  1  0
 20 50  1  0
 20 51  1  0
 21 52  1  0
 22 53  1  0
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 23 55  1  0
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 24 57  1  1
 25 58  1  0
 25 59  1  0
 25 60  1  0
 26 61  1  0
 26 62  1  0
 26 63  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       3.069   0.796   1.796  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.611  -0.012   0.716  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.971   0.108   0.197  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.906   0.903   0.634  0.00  0.00           C+0
HETATM    5  C   UNK     0       7.260   0.951   0.038  0.00  0.00           C+0
HETATM    6  O   UNK     0       7.492   0.170  -0.925  0.00  0.00           O+0
HETATM    7  N   UNK     0       8.233   1.817   0.515  0.00  0.00           N+0
HETATM    8  C   UNK     0       9.544   1.812  -0.110  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.438   2.168  -1.550  0.00  0.00           C+0
HETATM   10  O   UNK     0       8.288   2.414  -2.028  0.00  0.00           O+0
HETATM   11  O   UNK     0      10.541   2.236  -2.366  0.00  0.00           O+0
HETATM   12  C   UNK     0       2.829  -0.885   0.130  0.00  0.00           C+0
HETATM   13  C   UNK     0       1.409  -1.181   0.419  0.00  0.00           C+0
HETATM   14  C   UNK     0       0.907  -1.080   1.779  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.641  -0.868  -0.782  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.845  -1.009  -0.841  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.327  -2.376  -0.518  0.00  0.00           C+0
HETATM   18  C   UNK     0      -1.497   0.148  -0.193  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.962   0.245  -0.197  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.588   1.440   0.526  0.00  0.00           C+0
HETATM   21  C   UNK     0      -3.851  -0.554  -0.750  0.00  0.00           C+0
HETATM   22  C   UNK     0      -5.321  -0.303  -0.652  0.00  0.00           C+0
HETATM   23  C   UNK     0      -6.090  -1.393   0.027  0.00  0.00           C+0
HETATM   24  C   UNK     0      -7.560  -1.066   0.084  0.00  0.00           C+0
HETATM   25  C   UNK     0      -8.168  -0.880  -1.292  0.00  0.00           C+0
HETATM   26  C   UNK     0      -7.860   0.183   0.887  0.00  0.00           C+0
HETATM   27  H   UNK     0       2.943   0.272   2.762  0.00  0.00           H+0
HETATM   28  H   UNK     0       3.849   1.580   2.070  0.00  0.00           H+0
HETATM   29  H   UNK     0       2.221   1.460   1.510  0.00  0.00           H+0
HETATM   30  H   UNK     0       5.276  -0.524  -0.669  0.00  0.00           H+0
HETATM   31  H   UNK     0       5.675   1.548   1.471  0.00  0.00           H+0
HETATM   32  H   UNK     0       8.063   2.473   1.299  0.00  0.00           H+0
HETATM   33  H   UNK     0      10.015   0.781  -0.078  0.00  0.00           H+0
HETATM   34  H   UNK     0      10.230   2.460   0.429  0.00  0.00           H+0
HETATM   35  H   UNK     0      10.476   2.806  -3.209  0.00  0.00           H+0
HETATM   36  H   UNK     0       3.253  -1.487  -0.703  0.00  0.00           H+0
HETATM   37  H   UNK     0       1.456  -2.385   0.333  0.00  0.00           H+0
HETATM   38  H   UNK     0      -0.135  -1.573   1.757  0.00  0.00           H+0
HETATM   39  H   UNK     0       0.708  -0.087   2.172  0.00  0.00           H+0
HETATM   40  H   UNK     0       1.518  -1.620   2.547  0.00  0.00           H+0
HETATM   41  H   UNK     0       1.077  -1.461  -1.629  0.00  0.00           H+0
HETATM   42  H   UNK     0       0.824   0.197  -1.165  0.00  0.00           H+0
HETATM   43  H   UNK     0      -1.097  -0.885  -1.956  0.00  0.00           H+0
HETATM   44  H   UNK     0      -0.482  -3.057  -0.191  0.00  0.00           H+0
HETATM   45  H   UNK     0      -2.091  -2.313   0.282  0.00  0.00           H+0
HETATM   46  H   UNK     0      -1.777  -2.934  -1.357  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.045   1.133  -0.613  0.00  0.00           H+0
HETATM   48  H   UNK     0      -1.185   0.274   0.894  0.00  0.00           H+0
HETATM   49  H   UNK     0      -4.335   1.040   1.233  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.801   1.956   1.114  0.00  0.00           H+0
HETATM   51  H   UNK     0      -4.116   2.072  -0.204  0.00  0.00           H+0
HETATM   52  H   UNK     0      -3.485  -1.404  -1.314  0.00  0.00           H+0
HETATM   53  H   UNK     0      -5.608   0.660  -0.260  0.00  0.00           H+0
HETATM   54  H   UNK     0      -5.674  -0.309  -1.728  0.00  0.00           H+0
HETATM   55  H   UNK     0      -5.962  -2.397  -0.422  0.00  0.00           H+0
HETATM   56  H   UNK     0      -5.773  -1.504   1.108  0.00  0.00           H+0
HETATM   57  H   UNK     0      -8.147  -1.892   0.566  0.00  0.00           H+0
HETATM   58  H   UNK     0      -7.867   0.109  -1.733  0.00  0.00           H+0
HETATM   59  H   UNK     0      -9.269  -0.815  -1.143  0.00  0.00           H+0
HETATM   60  H   UNK     0      -7.976  -1.718  -1.974  0.00  0.00           H+0
HETATM   61  H   UNK     0      -7.124   0.354   1.708  0.00  0.00           H+0
HETATM   62  H   UNK     0      -7.815   1.083   0.237  0.00  0.00           H+0
HETATM   63  H   UNK     0      -8.889   0.158   1.315  0.00  0.00           H+0
CONECT    1    2   27   28   29                                             
CONECT    2    1    3   12                                                  
CONECT    3    2    4   30                                                  
CONECT    4    3    5   31                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   32                                                  
CONECT    8    7    9   33   34                                             
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   35                                                       
CONECT   12    2   13   36                                                  
CONECT   13   12   14   15   37                                             
CONECT   14   13   38   39   40                                             
CONECT   15   13   16   41   42                                             
CONECT   16   15   17   18   43                                             
CONECT   17   16   44   45   46                                             
CONECT   18   16   19   47   48                                             
CONECT   19   18   20   21                                                  
CONECT   20   19   49   50   51                                             
CONECT   21   19   22   52                                                  
CONECT   22   21   23   53   54                                             
CONECT   23   22   24   55   56                                             
CONECT   24   23   25   26   57                                             
CONECT   25   24   58   59   60                                             
CONECT   26   24   61   62   63                                             
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    1                                                            
CONECT   30    3                                                            
CONECT   31    4                                                            
CONECT   32    7                                                            
CONECT   33    8                                                            
CONECT   34    8                                                            
CONECT   35   11                                                            
CONECT   36   12                                                            
CONECT   37   13                                                            
CONECT   38   14                                                            
CONECT   39   14                                                            
CONECT   40   14                                                            
CONECT   41   15                                                            
CONECT   42   15                                                            
CONECT   43   16                                                            
CONECT   44   17                                                            
CONECT   45   17                                                            
CONECT   46   17                                                            
CONECT   47   18                                                            
CONECT   48   18                                                            
CONECT   49   20                                                            
CONECT   50   20                                                            
CONECT   51   20                                                            
CONECT   52   21                                                            
CONECT   53   22                                                            
CONECT   54   22                                                            
CONECT   55   23                                                            
CONECT   56   23                                                            
CONECT   57   24                                                            
CONECT   58   25                                                            
CONECT   59   25                                                            
CONECT   60   25                                                            
CONECT   61   26                                                            
CONECT   62   26                                                            
CONECT   63   26                                                            
MASTER        0    0    0    0    0    0    0    0   63    0  124    0
END

RDKit          3D

63 62  0  0  0  0  0  0  0  0999 V2000
    3.0694    0.7956    1.7960 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6109   -0.0120    0.7155 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9713    0.1080    0.1973 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9063    0.9025    0.6343 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2601    0.9512    0.0383 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4923    0.1695   -0.9254 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.2327    1.8168    0.5154 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.5439    1.8119   -0.1101 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4384    2.1678   -1.5504 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2878    2.4142   -2.0280 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.5410    2.2358   -2.3656 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8285   -0.8854    0.1297 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4087   -1.1812    0.4189 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.9066   -1.0804    1.7787 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6409   -0.8675   -0.7815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8452   -1.0086   -0.8412 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3269   -2.3764   -0.5180 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4970    0.1482   -0.1927 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9620    0.2448   -0.1969 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5881    1.4395    0.5256 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8513   -0.5539   -0.7497 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3210   -0.3026   -0.6522 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0899   -1.3933    0.0268 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5602   -1.0657    0.0843 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.1679   -0.8798   -1.2920 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8601    0.1833    0.8865 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9427    0.2719    2.7618 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8489    1.5799    2.0704 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2206    1.4602    1.5101 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2763   -0.5239   -0.6687 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6750    1.5479    1.4710 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0625    2.4726    1.2987 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0154    0.7812   -0.0777 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2302    2.4603    0.4288 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.4762    2.8062   -3.2092 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2529   -1.4873   -0.7027 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4561   -2.3848    0.3327 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1349   -1.5727    1.7568 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7078   -0.0868    2.1722 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5176   -1.6201    2.5467 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0765   -1.4612   -1.6289 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8241    0.1973   -1.1652 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0970   -0.8853   -1.9563 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4822   -3.0565   -0.1911 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0915   -2.3126    0.2818 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7767   -2.9337   -1.3565 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0453    1.1335   -0.6132 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1848    0.2742    0.8941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3345    1.0398    1.2332 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8011    1.9565    1.1137 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1157    2.0723   -0.2041 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4853   -1.4044   -1.3142 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6078    0.6597   -0.2600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6741   -0.3088   -1.7284 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9615   -2.3966   -0.4222 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7732   -1.5037    1.1076 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1467   -1.8923    0.5655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8671    0.1093   -1.7329 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2686   -0.8151   -1.1430 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9757   -1.7178   -1.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1242    0.3537    1.7081 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8151    1.0828    0.2373 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8890    0.1576    1.3145 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
  2 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  2  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  3 30  1  0
  4 31  1  0
  7 32  1  0
  8 33  1  0
  8 34  1  0
 11 35  1  0
 12 36  1  0
 13 37  1  6
 14 38  1  0
 14 39  1  0
 14 40  1  0
 15 41  1  0
 15 42  1  0
 16 43  1  6
 17 44  1  0
 17 45  1  0
 17 46  1  0
 18 47  1  0
 18 48  1  0
 20 49  1  0
 20 50  1  0
 20 51  1  0
 21 52  1  0
 22 53  1  0
 22 54  1  0
 23 55  1  0
 23 56  1  0
 24 57  1  1
 25 58  1  0
 25 59  1  0
 25 60  1  0
 26 61  1  0
 26 62  1  0
 26 63  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
Saccharonoate	Generator
2-{[(2E,4E,6S,8R,10E)-1-hydroxy-4,6,8,10,14-pentamethylpentadeca-2,4,10-trien-1-ylidene]amino}acetate	Generator

Chemical Formula

C₂₂H₃₇NO₃

Average Mass

363.5420 Da

Monoisotopic Mass

363.27734 Da

IUPAC Name

2-[(2E,4E,8R,10E)-4,6,8,10,14-pentamethylpentadeca-2,4,10-trienamido]acetic acid

Traditional Name

[(2E,4E,8R,10E)-4,6,8,10,14-pentamethylpentadeca-2,4,10-trienamido]acetic acid

CAS Registry Number

Not Available

SMILES

CC(C)CC\C=C(/C)C[C@H](C)C[C@H](C)\C=C(/C)\C=C\C(=O)NCC(O)=O

InChI Identifier

InChI=1S/C22H37NO3/c1-16(2)8-7-9-17(3)12-19(5)14-20(6)13-18(4)10-11-21(24)23-15-22(25)26/h9-11,13,16,19-20H,7-8,12,14-15H2,1-6H3,(H,23,24)(H,25,26)/b11-10+,17-9+,18-13+/t19-,20+/m0/s1

InChI Key

IDHWXSORJXHAOU-AUAOHMEYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Saccharothrix	NPAtlas	31451754
Saccharothrix xinjiangensis	LOTUS Database	35616633

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.52	ALOGPS
logP	5.33	ChemAxon
logS	-5.5	ALOGPS
pKa (Strongest Acidic)	3.85	ChemAxon
pKa (Strongest Basic)	-0.48	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	66.4 Å²	ChemAxon
Rotatable Bond Count	12	ChemAxon
Refractivity	110.82 m³·mol⁻¹	ChemAxon
Polarizability	45.21 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA024956

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

138858243

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Babadi ZK, Sudarman E, Ebrahimipour GH, Primahana G, Stadler M, Wink J: Structurally diverse metabolites from the rare actinobacterium Saccharothrix xinjiangensis. J Antibiot (Tokyo). 2020 Jan;73(1):48-55. doi: 10.1038/s41429-019-0223-7. Epub 2019 Aug 26. [PubMed:31451754 ]

Showing NP-Card for Saccharonoic acid (NP0020458)

MOL for NP0020458 (Saccharonoic acid)

3D MOL for NP0020458 (Saccharonoic acid)

3D SDF for NP0020458 (Saccharonoic acid)

3D-SDF for NP0020458 (Saccharonoic acid)

PDB for NP0020458 (Saccharonoic acid)

3D PDB for NP0020458 (Saccharonoic acid)

SMILES for NP0020458 (Saccharonoic acid)

INCHI for NP0020458 (Saccharonoic acid)

Structure for NP0020458 (Saccharonoic acid)

3D Structure for NP0020458 (Saccharonoic acid)