NP-MRD: Showing NP-Card for Trichocadinin C (NP0020378)

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Record Information

Version

2.0

Created at

2021-01-06 05:48:40 UTC

Updated at

2026-02-06 00:02:03 UTC

NP-MRD ID

NP0020378

Natural Product DOI

https://doi.org/10.57994/5467

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Trichocadinin C

Provided By

NPAtlas

Description

Trichocadinin C is found in Trichoderma and Trichoderma virens. Trichocadinin C was first documented in 2019 (PMID: 31418264). Based on a literature review very few articles have been published on (7R)-7-[(2S)-1-hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.0⁴,¹²]Dodeca-1(11),3,8(12),9-tetraene-10-carboxylic acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242120293D          

 35 37  0  0  0  0            999 V2000
    2.0166   -0.2475    1.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1191    0.3786    0.1594 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1630    1.8498    0.2345 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2878    2.4960   -0.9723 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1467   -0.2480   -0.7941 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4886   -1.6868   -0.9037 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7708   -2.6801   -0.0971 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6376   -2.3151    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7794   -2.9766    0.6132 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7846   -2.1034    0.6539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3969   -0.9152    0.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9847    0.3301    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2315    1.3941   -0.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8639    2.6814   -0.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2009    3.6547   -0.8953 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1948    2.8409   -0.1947 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8661    1.2465   -0.6448 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2737    0.0094   -0.4923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0517   -1.0282   -0.0434 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9731   -0.5101    1.7104 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3676    0.5596    2.2530 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7240   -1.0726    1.7044 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.0481   -0.2015 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3676    2.2953    0.8781 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1120    2.1078    0.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8977    2.0782   -1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3271    0.1982   -1.8133 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5886   -1.8184   -0.7017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4021   -2.0142   -1.9880 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8557   -3.7255   -0.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2509   -2.7492    0.9231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7790   -4.0222    0.8672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0319    0.4086    0.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5661    3.4262    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3611    2.1096   -0.9862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  2  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 13 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18  5  1  0  0  0  0
 19  8  1  0  0  0  0
 19 11  2  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  1 22  1  0  0  0  0
  2 23  1  6  0  0  0
  3 24  1  0  0  0  0
  3 25  1  0  0  0  0
  4 26  1  0  0  0  0
  5 27  1  6  0  0  0
  6 28  1  0  0  0  0
  6 29  1  0  0  0  0
  7 30  1  0  0  0  0
  7 31  1  0  0  0  0
  9 32  1  0  0  0  0
 12 33  1  0  0  0  0
 16 34  1  0  0  0  0
 17 35  1  0  0  0  0
M  END

     RDKit          3D

 35 37  0  0  0  0  0  0  0  0999 V2000
    2.0166   -0.2475    1.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1191    0.3786    0.1594 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1630    1.8498    0.2345 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2878    2.4960   -0.9723 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1467   -0.2480   -0.7941 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4886   -1.6868   -0.9037 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7708   -2.6801   -0.0971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6376   -2.3151    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7794   -2.9766    0.6132 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7846   -2.1034    0.6539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3969   -0.9152    0.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9847    0.3301    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2315    1.3941   -0.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8639    2.6814   -0.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2009    3.6547   -0.8953 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1948    2.8409   -0.1947 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8661    1.2465   -0.6448 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2737    0.0094   -0.4923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0517   -1.0282   -0.0434 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9731   -0.5101    1.7104 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3676    0.5596    2.2530 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7240   -1.0726    1.7044 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.0481   -0.2015 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3676    2.2953    0.8781 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1120    2.1078    0.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8977    2.0782   -1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3271    0.1982   -1.8133 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5886   -1.8184   -0.7017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4021   -2.0142   -1.9880 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8557   -3.7255   -0.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2509   -2.7492    0.9231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7790   -4.0222    0.8672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0319    0.4086    0.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5661    3.4262    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3611    2.1096   -0.9862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 13 17  1  0
 17 18  2  0
 18 19  1  0
 18  5  1  0
 19  8  1  0
 19 11  2  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  2 23  1  6
  3 24  1  0
  3 25  1  0
  4 26  1  0
  5 27  1  6
  6 28  1  0
  6 29  1  0
  7 30  1  0
  7 31  1  0
  9 32  1  0
 12 33  1  0
 16 34  1  0
 17 35  1  0
M  END


  Mrv1652306242120293D          

 35 37  0  0  0  0            999 V2000
    2.0166   -0.2475    1.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1191    0.3786    0.1594 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1630    1.8498    0.2345 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2878    2.4960   -0.9723 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1467   -0.2480   -0.7941 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4886   -1.6868   -0.9037 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7708   -2.6801   -0.0971 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6376   -2.3151    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7794   -2.9766    0.6132 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7846   -2.1034    0.6539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3969   -0.9152    0.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9847    0.3301    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2315    1.3941   -0.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8639    2.6814   -0.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2009    3.6547   -0.8953 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1948    2.8409   -0.1947 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8661    1.2465   -0.6448 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2737    0.0094   -0.4923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0517   -1.0282   -0.0434 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9731   -0.5101    1.7104 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3676    0.5596    2.2530 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7240   -1.0726    1.7044 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.0481   -0.2015 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3676    2.2953    0.8781 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1120    2.1078    0.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8977    2.0782   -1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3271    0.1982   -1.8133 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5886   -1.8184   -0.7017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4021   -2.0142   -1.9880 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8557   -3.7255   -0.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2509   -2.7492    0.9231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7790   -4.0222    0.8672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0319    0.4086    0.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5661    3.4262    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3611    2.1096   -0.9862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  2  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 13 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18  5  1  0  0  0  0
 19  8  1  0  0  0  0
 19 11  2  0  0  0  0
  1 20  1  0  0  0  0
  1 21  1  0  0  0  0
  1 22  1  0  0  0  0
  2 23  1  6  0  0  0
  3 24  1  0  0  0  0
  3 25  1  0  0  0  0
  4 26  1  0  0  0  0
  5 27  1  6  0  0  0
  6 28  1  0  0  0  0
  6 29  1  0  0  0  0
  7 30  1  0  0  0  0
  7 31  1  0  0  0  0
  9 32  1  0  0  0  0
 12 33  1  0  0  0  0
 16 34  1  0  0  0  0
 17 35  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0020378

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C1=C([H])C2=C3C(=C([H])O2)C([H])([H])C([H])([H])[C@@]([H])(C3=C1[H])[C@]([H])(C([H])([H])[H])C([H])([H])O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C15H16O4/c1-8(6-16)11-3-2-9-7-19-13-5-10(15(17)18)4-12(11)14(9)13/h4-5,7-8,11,16H,2-3,6H2,1H3,(H,17,18)/t8-,11-/m1/s1

> <INCHI_KEY>
NJYGTKDUQVRJAI-LDYMZIIASA-N

> <FORMULA>
C15H16O4

> <MOLECULAR_WEIGHT>
260.289

> <EXACT_MASS>
260.104858995

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
35

> <JCHEM_AVERAGE_POLARIZABILITY>
26.97979454726245

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(7R)-7-[(2S)-1-hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-10-carboxylic acid

> <ALOGPS_LOGP>
2.30

> <JCHEM_LOGP>
2.4575196366666665

> <ALOGPS_LOGS>
-3.45

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
15.460453426837628

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.6039494235396075

> <JCHEM_PKA_STRONGEST_BASIC>
-2.5973979330156

> <JCHEM_POLAR_SURFACE_AREA>
70.67

> <JCHEM_REFRACTIVITY>
70.58639999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
9.17e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(7R)-7-[(2S)-1-hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-10-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 35 37  0  0  0  0  0  0  0  0999 V2000
    2.0166   -0.2475    1.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1191    0.3786    0.1594 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1630    1.8498    0.2345 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2878    2.4960   -0.9723 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1467   -0.2480   -0.7941 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4886   -1.6868   -0.9037 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7708   -2.6801   -0.0971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6376   -2.3151    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7794   -2.9766    0.6132 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7846   -2.1034    0.6539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3969   -0.9152    0.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9847    0.3301    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2315    1.3941   -0.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8639    2.6814   -0.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2009    3.6547   -0.8953 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1948    2.8409   -0.1947 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8661    1.2465   -0.6448 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2737    0.0094   -0.4923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0517   -1.0282   -0.0434 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9731   -0.5101    1.7104 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3676    0.5596    2.2530 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7240   -1.0726    1.7044 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.0481   -0.2015 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3676    2.2953    0.8781 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1120    2.1078    0.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8977    2.0782   -1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3271    0.1982   -1.8133 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5886   -1.8184   -0.7017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4021   -2.0142   -1.9880 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8557   -3.7255   -0.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2509   -2.7492    0.9231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7790   -4.0222    0.8672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0319    0.4086    0.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5661    3.4262    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3611    2.1096   -0.9862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 13 17  1  0
 17 18  2  0
 18 19  1  0
 18  5  1  0
 19  8  1  0
 19 11  2  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  2 23  1  6
  3 24  1  0
  3 25  1  0
  4 26  1  0
  5 27  1  6
  6 28  1  0
  6 29  1  0
  7 30  1  0
  7 31  1  0
  9 32  1  0
 12 33  1  0
 16 34  1  0
 17 35  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       2.017  -0.248   1.547  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.119   0.379   0.159  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.163   1.850   0.235  0.00  0.00           C+0
HETATM    4  O   UNK     0       2.288   2.496  -0.972  0.00  0.00           O+0
HETATM    5  C   UNK     0       1.147  -0.248  -0.794  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.489  -1.687  -0.904  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.771  -2.680  -0.097  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.638  -2.315   0.165  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.779  -2.977   0.613  0.00  0.00           C+0
HETATM   10  O   UNK     0      -2.785  -2.103   0.654  0.00  0.00           O+0
HETATM   11  C   UNK     0      -2.397  -0.915   0.268  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.985   0.330   0.112  0.00  0.00           C+0
HETATM   13  C   UNK     0      -2.232   1.394  -0.337  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.864   2.681  -0.491  0.00  0.00           C+0
HETATM   15  O   UNK     0      -2.201   3.655  -0.895  0.00  0.00           O+0
HETATM   16  O   UNK     0      -4.195   2.841  -0.195  0.00  0.00           O+0
HETATM   17  C   UNK     0      -0.866   1.246  -0.645  0.00  0.00           C+0
HETATM   18  C   UNK     0      -0.274   0.009  -0.492  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.052  -1.028  -0.043  0.00  0.00           C+0
HETATM   20  H   UNK     0       0.973  -0.510   1.710  0.00  0.00           H+0
HETATM   21  H   UNK     0       2.368   0.560   2.253  0.00  0.00           H+0
HETATM   22  H   UNK     0       2.724  -1.073   1.704  0.00  0.00           H+0
HETATM   23  H   UNK     0       3.145   0.048  -0.202  0.00  0.00           H+0
HETATM   24  H   UNK     0       1.368   2.295   0.878  0.00  0.00           H+0
HETATM   25  H   UNK     0       3.112   2.108   0.804  0.00  0.00           H+0
HETATM   26  H   UNK     0       1.898   2.078  -1.739  0.00  0.00           H+0
HETATM   27  H   UNK     0       1.327   0.198  -1.813  0.00  0.00           H+0
HETATM   28  H   UNK     0       2.589  -1.818  -0.702  0.00  0.00           H+0
HETATM   29  H   UNK     0       1.402  -2.014  -1.988  0.00  0.00           H+0
HETATM   30  H   UNK     0       0.856  -3.725  -0.487  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.251  -2.749   0.923  0.00  0.00           H+0
HETATM   32  H   UNK     0      -1.779  -4.022   0.867  0.00  0.00           H+0
HETATM   33  H   UNK     0      -4.032   0.409   0.357  0.00  0.00           H+0
HETATM   34  H   UNK     0      -4.566   3.426   0.533  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.361   2.110  -0.986  0.00  0.00           H+0
CONECT    1    2   20   21   22                                             
CONECT    2    1    3    5   23                                             
CONECT    3    2    4   24   25                                             
CONECT    4    3   26                                                       
CONECT    5    2    6   18   27                                             
CONECT    6    5    7   28   29                                             
CONECT    7    6    8   30   31                                             
CONECT    8    7    9   19                                                  
CONECT    9    8   10   32                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   19                                                  
CONECT   12   11   13   33                                                  
CONECT   13   12   14   17                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   34                                                       
CONECT   17   13   18   35                                                  
CONECT   18   17   19    5                                                  
CONECT   19   18    8   11                                                  
CONECT   20    1                                                            
CONECT   21    1                                                            
CONECT   22    1                                                            
CONECT   23    2                                                            
CONECT   24    3                                                            
CONECT   25    3                                                            
CONECT   26    4                                                            
CONECT   27    5                                                            
CONECT   28    6                                                            
CONECT   29    6                                                            
CONECT   30    7                                                            
CONECT   31    7                                                            
CONECT   32    9                                                            
CONECT   33   12                                                            
CONECT   34   16                                                            
CONECT   35   17                                                            
MASTER        0    0    0    0    0    0    0    0   35    0   74    0
END

RDKit          3D

35 37  0  0  0  0  0  0  0  0999 V2000
    2.0166   -0.2475    1.5466 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1191    0.3786    0.1594 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1630    1.8498    0.2345 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2878    2.4960   -0.9723 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1467   -0.2480   -0.7941 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4886   -1.6868   -0.9037 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7708   -2.6801   -0.0971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6376   -2.3151    0.1652 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7794   -2.9766    0.6132 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7846   -2.1034    0.6539 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3969   -0.9152    0.2675 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9847    0.3301    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2315    1.3941   -0.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8639    2.6814   -0.4911 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2009    3.6547   -0.8953 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1948    2.8409   -0.1947 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8661    1.2465   -0.6448 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2737    0.0094   -0.4923 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0517   -1.0282   -0.0434 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9731   -0.5101    1.7104 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3676    0.5596    2.2530 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7240   -1.0726    1.7044 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1448    0.0481   -0.2015 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3676    2.2953    0.8781 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1120    2.1078    0.8038 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8977    2.0782   -1.7391 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3271    0.1982   -1.8133 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5886   -1.8184   -0.7017 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4021   -2.0142   -1.9880 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8557   -3.7255   -0.4874 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2509   -2.7492    0.9231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7790   -4.0222    0.8672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0319    0.4086    0.3568 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5661    3.4262    0.5333 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3611    2.1096   -0.9862 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  2  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 13 17  1  0
 17 18  2  0
 18 19  1  0
 18  5  1  0
 19  8  1  0
 19 11  2  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  2 23  1  6
  3 24  1  0
  3 25  1  0
  4 26  1  0
  5 27  1  6
  6 28  1  0
  6 29  1  0
  7 30  1  0
  7 31  1  0
  9 32  1  0
 12 33  1  0
 16 34  1  0
 17 35  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(7R)-7-[(2S)-1-Hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.0,]dodeca-1(11),3,8(12),9-tetraene-10-carboxylate	Generator

Chemical Formula

C₁₅H₁₆O₄

Average Mass

260.2890 Da

Monoisotopic Mass

260.10486 Da

IUPAC Name

(7R)-7-[(2S)-1-hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-10-carboxylic acid

Traditional Name

(7R)-7-[(2S)-1-hydroxypropan-2-yl]-2-oxatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-10-carboxylic acid

CAS Registry Number

Not Available

SMILES

C[C@H](CO)[C@H]1CCC2=COC3=C2C1=CC(=C3)C(O)=O

InChI Identifier

InChI=1S/C15H16O4/c1-8(6-16)11-3-2-9-7-19-13-5-10(15(17)18)4-12(11)14(9)13/h4-5,7-8,11,16H,2-3,6H2,1H3,(H,17,18)/t8-,11-/m1/s1

InChI Key

NJYGTKDUQVRJAI-LDYMZIIASA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 500.0, Dimethylsulfoxide-d6, simulated)	epoynton@sfu.ca	Not Available	Not Available	2026-02-05	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 125.0, Dimethylsulfoxide-d6, simulated)	epoynton@sfu.ca	Not Available	Not Available	2026-02-05	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Trichoderma	NPAtlas	31418264
Trichoderma virens	LOTUS Database	35616633
Trichoderma virens QA-8		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.3	ALOGPS
logP	2.46	ChemAxon
logS	-3.4	ALOGPS
pKa (Strongest Acidic)	3.6	ChemAxon
pKa (Strongest Basic)	-2.6	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	70.67 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	70.59 m³·mol⁻¹	ChemAxon
Polarizability	26.98 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA025332

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

145721098

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Shi XS, Meng LH, Li XM, Li X, Wang DJ, Li HL, Zhou XW, Wang BG: Trichocadinins B-G: Antimicrobial Cadinane Sesquiterpenes from Trichoderma virens QA-8, an Endophytic Fungus Obtained from the Medicinal Plant Artemisia argyi. J Nat Prod. 2019 Sep 27;82(9):2470-2476. doi: 10.1021/acs.jnatprod.9b00139. Epub 2019 Aug 16. [PubMed:31418264 ]
DOI: 10.1021/acs.jnatprod.9b00139
PMID: 31418264

Showing NP-Card for Trichocadinin C (NP0020378)

MOL for NP0020378 (Trichocadinin C)

3D MOL for NP0020378 (Trichocadinin C)

3D SDF for NP0020378 (Trichocadinin C)

3D-SDF for NP0020378 (Trichocadinin C)

PDB for NP0020378 (Trichocadinin C)

3D PDB for NP0020378 (Trichocadinin C)

SMILES for NP0020378 (Trichocadinin C)

INCHI for NP0020378 (Trichocadinin C)

Structure for NP0020378 (Trichocadinin C)

3D Structure for NP0020378 (Trichocadinin C)