Showing NP-Card for Gibbosicolid D (NP0020117)
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| Version | 2.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Created at | 2021-01-06 05:36:27 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Updated at | 2021-07-15 17:32:48 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NP-MRD ID | NP0020117 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Secondary Accession Numbers | None | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Natural Product Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Common Name | Gibbosicolid D | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Provided By | NPAtlas![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description | Gibbosicolid D is found in Ganoderma gibbosum. Based on a literature review very few articles have been published on Gibbosicolid D. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Structure | MOL for NP0020117 (Gibbosicolid D)
Mrv1652307042107503D
76 81 0 0 0 0 999 V2000
4.4043 -2.5693 0.0343 C 0 0 0 0 0 0 0 0 0 0 0 0
3.3684 -1.4754 -0.2370 C 0 0 0 0 0 0 0 0 0 0 0 0
3.8308 -0.3587 -0.7684 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3140 -0.2734 -1.0491 C 0 0 1 0 0 0 0 0 0 0 0 0
5.7214 1.1437 -1.3924 C 0 0 1 0 0 0 0 0 0 0 0 0
5.9946 1.7575 -0.0328 C 0 0 2 0 0 0 0 0 0 0 0 0
7.2131 2.6342 -0.0243 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2432 0.6123 0.8668 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6152 0.7425 2.0614 O 0 0 0 0 0 0 0 0 0 0 0 0
5.9967 -0.5328 0.1627 O 0 0 0 0 0 0 0 0 0 0 0 0
2.0052 -1.7804 0.1331 C 0 0 1 0 0 0 0 0 0 0 0 0
1.8160 -2.2554 1.5332 C 0 0 2 0 0 0 0 0 0 0 0 0
0.4106 -1.8995 1.9606 C 0 0 1 0 0 0 0 0 0 0 0 0
0.4006 -0.9213 2.9477 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.2092 -1.4564 0.6800 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.5942 -2.6799 -0.1095 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9470 -0.7336 -0.0361 C 0 0 1 0 0 0 0 0 0 0 0 0
1.2247 0.5864 0.5742 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4773 -0.5731 -1.4180 C 0 0 0 0 0 0 0 0 0 0 0 0
1.2369 -0.6948 -2.4254 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.9420 -0.2583 -1.6022 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.8076 -0.2424 -0.6121 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2341 0.0903 -0.8983 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.2505 1.0117 -2.0845 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.0896 -1.0903 -1.2039 C 0 0 2 0 0 0 0 0 0 0 0 0
-5.5070 -0.6958 -1.3144 C 0 0 1 0 0 0 0 0 0 0 0 0
-5.8788 0.6227 -0.8041 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.9283 1.1100 -1.1898 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0791 1.4319 0.1560 C 0 0 1 0 0 0 0 0 0 0 0 0
-4.9632 2.8720 -0.2100 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8498 1.3711 1.4840 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.7953 0.7174 0.3648 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.7274 1.4530 1.0995 C 0 0 1 0 0 0 0 0 0 0 0 0
-1.7636 0.4100 1.6827 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.3274 -0.9611 1.6922 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.3538 -0.5490 0.7788 C 0 0 2 0 0 0 0 0 0 0 0 0
5.2047 -2.5383 -0.7274 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9273 -3.5692 -0.0528 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8742 -2.3863 1.0137 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2531 0.5110 -1.0412 H 0 0 0 0 0 0 0 0 0 0 0 0
5.5973 -0.9199 -1.8815 H 0 0 0 0 0 0 0 0 0 0 0 0
6.6750 1.1226 -1.9517 H 0 0 0 0 0 0 0 0 0 0 0 0
4.9096 1.6655 -1.9052 H 0 0 0 0 0 0 0 0 0 0 0 0
5.1071 2.3570 0.2670 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8172 2.5341 0.8976 H 0 0 0 0 0 0 0 0 0 0 0 0
6.9274 3.7202 -0.0897 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8763 2.4255 -0.8866 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6720 -2.6334 -0.5603 H 0 0 0 0 0 0 0 0 0 0 0 0
2.5682 -1.8781 2.2475 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9309 -3.3777 1.5591 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1169 -2.8204 2.2915 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1868 -0.9883 3.5411 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6861 -2.8806 -0.0134 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2768 -2.5815 -1.1476 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0964 -3.5938 0.3037 H 0 0 0 0 0 0 0 0 0 0 0 0
2.2377 0.5843 1.0296 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2299 1.3655 -0.2126 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5546 0.8739 1.4164 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.2392 -0.0332 -2.6368 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.1280 1.6397 -2.1952 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2226 0.3467 -2.9980 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3486 1.6638 -2.1128 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.9605 -1.8730 -0.3995 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.7591 -1.5830 -2.1347 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.8389 -0.7513 -2.3911 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1417 -1.4739 -0.8021 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.5959 3.1723 -1.0795 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.2991 3.5615 0.6206 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.8847 3.1711 -0.3667 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9286 1.5260 1.2764 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.4093 2.1061 2.1609 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.7615 0.3794 1.9582 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.0440 -0.1717 1.0265 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.1207 2.0172 0.3461 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.1519 2.0973 1.8816 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4582 0.6469 2.7031 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0 0 0 0
2 3 2 0 0 0 0
3 4 1 0 0 0 0
4 5 1 0 0 0 0
5 6 1 0 0 0 0
6 7 1 0 0 0 0
6 8 1 0 0 0 0
8 9 2 0 0 0 0
8 10 1 0 0 0 0
2 11 1 0 0 0 0
11 12 1 0 0 0 0
12 13 1 0 0 0 0
13 14 1 0 0 0 0
13 15 1 0 0 0 0
15 16 1 6 0 0 0
15 17 1 0 0 0 0
17 18 1 1 0 0 0
17 19 1 0 0 0 0
19 20 2 0 0 0 0
19 21 1 0 0 0 0
21 22 2 0 0 0 0
22 23 1 0 0 0 0
23 24 1 6 0 0 0
23 25 1 0 0 0 0
25 26 1 0 0 0 0
26 27 1 0 0 0 0
27 28 2 0 0 0 0
27 29 1 0 0 0 0
29 30 1 6 0 0 0
29 31 1 0 0 0 0
29 32 1 0 0 0 0
32 33 1 0 0 0 0
33 34 1 0 0 0 0
34 35 1 0 0 0 0
36 35 1 1 0 0 0
10 4 1 0 0 0 0
17 11 1 0 0 0 0
36 22 1 0 0 0 0
36 15 1 0 0 0 0
32 23 1 0 0 0 0
36 34 1 0 0 0 0
1 37 1 0 0 0 0
1 38 1 0 0 0 0
1 39 1 0 0 0 0
3 40 1 0 0 0 0
4 41 1 6 0 0 0
5 42 1 0 0 0 0
5 43 1 0 0 0 0
6 44 1 1 0 0 0
7 45 1 0 0 0 0
7 46 1 0 0 0 0
7 47 1 0 0 0 0
11 48 1 6 0 0 0
12 49 1 0 0 0 0
12 50 1 0 0 0 0
13 51 1 1 0 0 0
14 52 1 0 0 0 0
16 53 1 0 0 0 0
16 54 1 0 0 0 0
16 55 1 0 0 0 0
18 56 1 0 0 0 0
18 57 1 0 0 0 0
18 58 1 0 0 0 0
21 59 1 0 0 0 0
24 60 1 0 0 0 0
24 61 1 0 0 0 0
24 62 1 0 0 0 0
25 63 1 0 0 0 0
25 64 1 0 0 0 0
26 65 1 0 0 0 0
26 66 1 0 0 0 0
30 67 1 0 0 0 0
30 68 1 0 0 0 0
30 69 1 0 0 0 0
31 70 1 0 0 0 0
31 71 1 0 0 0 0
31 72 1 0 0 0 0
32 73 1 1 0 0 0
33 74 1 0 0 0 0
33 75 1 0 0 0 0
34 76 1 1 0 0 0
M END
3D MOL for NP0020117 (Gibbosicolid D)
RDKit 3D
76 81 0 0 0 0 0 0 0 0999 V2000
4.4043 -2.5693 0.0343 C 0 0 0 0 0 0 0 0 0 0 0 0
3.3684 -1.4754 -0.2370 C 0 0 0 0 0 0 0 0 0 0 0 0
3.8308 -0.3587 -0.7684 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3140 -0.2734 -1.0491 C 0 0 1 0 0 0 0 0 0 0 0 0
5.7214 1.1437 -1.3924 C 0 0 0 0 0 0 0 0 0 0 0 0
5.9946 1.7575 -0.0328 C 0 0 2 0 0 0 0 0 0 0 0 0
7.2131 2.6342 -0.0243 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2432 0.6123 0.8668 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6152 0.7425 2.0614 O 0 0 0 0 0 0 0 0 0 0 0 0
5.9967 -0.5328 0.1627 O 0 0 0 0 0 0 0 0 0 0 0 0
2.0052 -1.7804 0.1331 C 0 0 1 0 0 0 0 0 0 0 0 0
1.8160 -2.2554 1.5332 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4106 -1.8995 1.9606 C 0 0 1 0 0 0 0 0 0 0 0 0
0.4006 -0.9213 2.9477 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.2092 -1.4564 0.6800 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.5942 -2.6799 -0.1095 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9470 -0.7336 -0.0361 C 0 0 1 0 0 0 0 0 0 0 0 0
1.2247 0.5864 0.5742 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4773 -0.5731 -1.4180 C 0 0 0 0 0 0 0 0 0 0 0 0
1.2369 -0.6948 -2.4254 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.9420 -0.2583 -1.6022 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.8076 -0.2424 -0.6121 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2341 0.0903 -0.8983 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.2505 1.0117 -2.0845 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.0896 -1.0903 -1.2039 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.5070 -0.6958 -1.3144 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8788 0.6227 -0.8041 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.9283 1.1100 -1.1898 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0791 1.4319 0.1560 C 0 0 1 0 0 0 0 0 0 0 0 0
-4.9632 2.8720 -0.2100 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8498 1.3711 1.4840 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.7953 0.7174 0.3648 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.7274 1.4530 1.0995 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.7636 0.4100 1.6827 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.3274 -0.9611 1.6922 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.3538 -0.5490 0.7788 C 0 0 2 0 0 0 0 0 0 0 0 0
5.2047 -2.5383 -0.7274 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9273 -3.5692 -0.0528 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8742 -2.3863 1.0137 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2531 0.5110 -1.0412 H 0 0 0 0 0 0 0 0 0 0 0 0
5.5973 -0.9199 -1.8815 H 0 0 0 0 0 0 0 0 0 0 0 0
6.6750 1.1226 -1.9517 H 0 0 0 0 0 0 0 0 0 0 0 0
4.9096 1.6655 -1.9052 H 0 0 0 0 0 0 0 0 0 0 0 0
5.1071 2.3570 0.2670 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8172 2.5341 0.8976 H 0 0 0 0 0 0 0 0 0 0 0 0
6.9274 3.7202 -0.0897 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8763 2.4255 -0.8866 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6720 -2.6334 -0.5603 H 0 0 0 0 0 0 0 0 0 0 0 0
2.5682 -1.8781 2.2475 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9309 -3.3777 1.5591 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1169 -2.8204 2.2915 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1868 -0.9883 3.5411 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6861 -2.8806 -0.0134 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2768 -2.5815 -1.1476 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0964 -3.5938 0.3037 H 0 0 0 0 0 0 0 0 0 0 0 0
2.2377 0.5843 1.0296 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2299 1.3655 -0.2126 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5546 0.8739 1.4164 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.2392 -0.0332 -2.6368 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.1280 1.6397 -2.1952 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2226 0.3467 -2.9980 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3486 1.6638 -2.1128 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.9605 -1.8730 -0.3995 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.7591 -1.5830 -2.1347 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.8389 -0.7513 -2.3911 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1417 -1.4739 -0.8021 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.5959 3.1723 -1.0795 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.2991 3.5615 0.6206 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.8847 3.1711 -0.3667 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9286 1.5260 1.2764 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.4093 2.1061 2.1609 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.7615 0.3794 1.9582 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.0440 -0.1717 1.0265 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.1207 2.0172 0.3461 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.1519 2.0973 1.8816 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4582 0.6469 2.7031 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 2 0
3 4 1 0
4 5 1 0
5 6 1 0
6 7 1 0
6 8 1 0
8 9 2 0
8 10 1 0
2 11 1 0
11 12 1 0
12 13 1 0
13 14 1 0
13 15 1 0
15 16 1 6
15 17 1 0
17 18 1 1
17 19 1 0
19 20 2 0
19 21 1 0
21 22 2 0
22 23 1 0
23 24 1 6
23 25 1 0
25 26 1 0
26 27 1 0
27 28 2 0
27 29 1 0
29 30 1 6
29 31 1 0
29 32 1 0
32 33 1 0
33 34 1 0
34 35 1 0
36 35 1 1
10 4 1 0
17 11 1 0
36 22 1 0
36 15 1 0
32 23 1 0
36 34 1 0
1 37 1 0
1 38 1 0
1 39 1 0
3 40 1 0
4 41 1 6
5 42 1 0
5 43 1 0
6 44 1 1
7 45 1 0
7 46 1 0
7 47 1 0
11 48 1 6
12 49 1 0
12 50 1 0
13 51 1 1
14 52 1 0
16 53 1 0
16 54 1 0
16 55 1 0
18 56 1 0
18 57 1 0
18 58 1 0
21 59 1 0
24 60 1 0
24 61 1 0
24 62 1 0
25 63 1 0
25 64 1 0
26 65 1 0
26 66 1 0
30 67 1 0
30 68 1 0
30 69 1 0
31 70 1 0
31 71 1 0
31 72 1 0
32 73 1 1
33 74 1 0
33 75 1 0
34 76 1 1
M END
3D SDF for NP0020117 (Gibbosicolid D)
Mrv1652307042107503D
76 81 0 0 0 0 999 V2000
4.4043 -2.5693 0.0343 C 0 0 0 0 0 0 0 0 0 0 0 0
3.3684 -1.4754 -0.2370 C 0 0 0 0 0 0 0 0 0 0 0 0
3.8308 -0.3587 -0.7684 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3140 -0.2734 -1.0491 C 0 0 1 0 0 0 0 0 0 0 0 0
5.7214 1.1437 -1.3924 C 0 0 1 0 0 0 0 0 0 0 0 0
5.9946 1.7575 -0.0328 C 0 0 2 0 0 0 0 0 0 0 0 0
7.2131 2.6342 -0.0243 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2432 0.6123 0.8668 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6152 0.7425 2.0614 O 0 0 0 0 0 0 0 0 0 0 0 0
5.9967 -0.5328 0.1627 O 0 0 0 0 0 0 0 0 0 0 0 0
2.0052 -1.7804 0.1331 C 0 0 1 0 0 0 0 0 0 0 0 0
1.8160 -2.2554 1.5332 C 0 0 2 0 0 0 0 0 0 0 0 0
0.4106 -1.8995 1.9606 C 0 0 1 0 0 0 0 0 0 0 0 0
0.4006 -0.9213 2.9477 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.2092 -1.4564 0.6800 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.5942 -2.6799 -0.1095 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9470 -0.7336 -0.0361 C 0 0 1 0 0 0 0 0 0 0 0 0
1.2247 0.5864 0.5742 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4773 -0.5731 -1.4180 C 0 0 0 0 0 0 0 0 0 0 0 0
1.2369 -0.6948 -2.4254 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.9420 -0.2583 -1.6022 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.8076 -0.2424 -0.6121 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2341 0.0903 -0.8983 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.2505 1.0117 -2.0845 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.0896 -1.0903 -1.2039 C 0 0 2 0 0 0 0 0 0 0 0 0
-5.5070 -0.6958 -1.3144 C 0 0 1 0 0 0 0 0 0 0 0 0
-5.8788 0.6227 -0.8041 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.9283 1.1100 -1.1898 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0791 1.4319 0.1560 C 0 0 1 0 0 0 0 0 0 0 0 0
-4.9632 2.8720 -0.2100 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8498 1.3711 1.4840 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.7953 0.7174 0.3648 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.7274 1.4530 1.0995 C 0 0 1 0 0 0 0 0 0 0 0 0
-1.7636 0.4100 1.6827 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.3274 -0.9611 1.6922 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.3538 -0.5490 0.7788 C 0 0 2 0 0 0 0 0 0 0 0 0
5.2047 -2.5383 -0.7274 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9273 -3.5692 -0.0528 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8742 -2.3863 1.0137 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2531 0.5110 -1.0412 H 0 0 0 0 0 0 0 0 0 0 0 0
5.5973 -0.9199 -1.8815 H 0 0 0 0 0 0 0 0 0 0 0 0
6.6750 1.1226 -1.9517 H 0 0 0 0 0 0 0 0 0 0 0 0
4.9096 1.6655 -1.9052 H 0 0 0 0 0 0 0 0 0 0 0 0
5.1071 2.3570 0.2670 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8172 2.5341 0.8976 H 0 0 0 0 0 0 0 0 0 0 0 0
6.9274 3.7202 -0.0897 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8763 2.4255 -0.8866 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6720 -2.6334 -0.5603 H 0 0 0 0 0 0 0 0 0 0 0 0
2.5682 -1.8781 2.2475 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9309 -3.3777 1.5591 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1169 -2.8204 2.2915 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1868 -0.9883 3.5411 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6861 -2.8806 -0.0134 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2768 -2.5815 -1.1476 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0964 -3.5938 0.3037 H 0 0 0 0 0 0 0 0 0 0 0 0
2.2377 0.5843 1.0296 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2299 1.3655 -0.2126 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5546 0.8739 1.4164 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.2392 -0.0332 -2.6368 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.1280 1.6397 -2.1952 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2226 0.3467 -2.9980 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3486 1.6638 -2.1128 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.9605 -1.8730 -0.3995 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.7591 -1.5830 -2.1347 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.8389 -0.7513 -2.3911 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1417 -1.4739 -0.8021 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.5959 3.1723 -1.0795 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.2991 3.5615 0.6206 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.8847 3.1711 -0.3667 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9286 1.5260 1.2764 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.4093 2.1061 2.1609 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.7615 0.3794 1.9582 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.0440 -0.1717 1.0265 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.1207 2.0172 0.3461 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.1519 2.0973 1.8816 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4582 0.6469 2.7031 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0 0 0 0
2 3 2 0 0 0 0
3 4 1 0 0 0 0
4 5 1 0 0 0 0
5 6 1 0 0 0 0
6 7 1 0 0 0 0
6 8 1 0 0 0 0
8 9 2 0 0 0 0
8 10 1 0 0 0 0
2 11 1 0 0 0 0
11 12 1 0 0 0 0
12 13 1 0 0 0 0
13 14 1 0 0 0 0
13 15 1 0 0 0 0
15 16 1 6 0 0 0
15 17 1 0 0 0 0
17 18 1 1 0 0 0
17 19 1 0 0 0 0
19 20 2 0 0 0 0
19 21 1 0 0 0 0
21 22 2 0 0 0 0
22 23 1 0 0 0 0
23 24 1 6 0 0 0
23 25 1 0 0 0 0
25 26 1 0 0 0 0
26 27 1 0 0 0 0
27 28 2 0 0 0 0
27 29 1 0 0 0 0
29 30 1 6 0 0 0
29 31 1 0 0 0 0
29 32 1 0 0 0 0
32 33 1 0 0 0 0
33 34 1 0 0 0 0
34 35 1 0 0 0 0
36 35 1 1 0 0 0
10 4 1 0 0 0 0
17 11 1 0 0 0 0
36 22 1 0 0 0 0
36 15 1 0 0 0 0
32 23 1 0 0 0 0
36 34 1 0 0 0 0
1 37 1 0 0 0 0
1 38 1 0 0 0 0
1 39 1 0 0 0 0
3 40 1 0 0 0 0
4 41 1 6 0 0 0
5 42 1 0 0 0 0
5 43 1 0 0 0 0
6 44 1 1 0 0 0
7 45 1 0 0 0 0
7 46 1 0 0 0 0
7 47 1 0 0 0 0
11 48 1 6 0 0 0
12 49 1 0 0 0 0
12 50 1 0 0 0 0
13 51 1 1 0 0 0
14 52 1 0 0 0 0
16 53 1 0 0 0 0
16 54 1 0 0 0 0
16 55 1 0 0 0 0
18 56 1 0 0 0 0
18 57 1 0 0 0 0
18 58 1 0 0 0 0
21 59 1 0 0 0 0
24 60 1 0 0 0 0
24 61 1 0 0 0 0
24 62 1 0 0 0 0
25 63 1 0 0 0 0
25 64 1 0 0 0 0
26 65 1 0 0 0 0
26 66 1 0 0 0 0
30 67 1 0 0 0 0
30 68 1 0 0 0 0
30 69 1 0 0 0 0
31 70 1 0 0 0 0
31 71 1 0 0 0 0
31 72 1 0 0 0 0
32 73 1 1 0 0 0
33 74 1 0 0 0 0
33 75 1 0 0 0 0
34 76 1 1 0 0 0
M END
> <DATABASE_ID>
NP0020117
> <DATABASE_NAME>
NP-MRD
> <SMILES>
[H]O[C@]1([H])C([H])([H])[C@]([H])(C(=C(/[H])[C@]2([H])OC(=O)[C@@]([H])(C([H])([H])[H])C2([H])[H])\C([H])([H])[H])[C@]2(C(=O)C([H])=C3[C@@]4(O[C@]4([H])C([H])([H])[C@@]4([H])C(C(=O)C([H])([H])C([H])([H])[C@]34C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H])[C@]12C([H])([H])[H])C([H])([H])[H]
> <INCHI_IDENTIFIER>
InChI=1S/C30H40O6/c1-15(10-17-11-16(2)25(34)35-17)18-12-23(33)29(7)28(18,6)22(32)13-20-27(5)9-8-21(31)26(3,4)19(27)14-24-30(20,29)36-24/h10,13,16-19,23-24,33H,8-9,11-12,14H2,1-7H3/b15-10+/t16-,17-,18+,19-,23+,24+,27-,28-,29+,30-/m0/s1
> <INCHI_KEY>
DBCOZDMIVDWFEY-UDIMBENTSA-N
> <FORMULA>
C30H40O6
> <MOLECULAR_WEIGHT>
496.644
> <EXACT_MASS>
496.282489008
> <JCHEM_ACCEPTOR_COUNT>
5
> <JCHEM_ATOM_COUNT>
76
> <JCHEM_AVERAGE_POLARIZABILITY>
54.74451781729289
> <JCHEM_BIOAVAILABILITY>
1
> <JCHEM_DONOR_COUNT>
1
> <JCHEM_FORMAL_CHARGE>
0
> <JCHEM_GHOSE_FILTER>
0
> <JCHEM_IUPAC>
(1R,3R,5R,10S,14R,15R,17R,18S)-17-hydroxy-6,6,10,14,18-pentamethyl-15-[(1E)-1-[(2R,4S)-4-methyl-5-oxooxolan-2-yl]prop-1-en-2-yl]-2-oxapentacyclo[9.7.0.0^{1,3}.0^{5,10}.0^{14,18}]octadec-11-ene-7,13-dione
> <ALOGPS_LOGP>
3.92
> <JCHEM_LOGP>
4.2283019043333345
> <ALOGPS_LOGS>
-5.16
> <JCHEM_MDDR_LIKE_RULE>
0
> <JCHEM_NUMBER_OF_RINGS>
6
> <JCHEM_PHYSIOLOGICAL_CHARGE>
0
> <JCHEM_PKA>
19.7367054707775
> <JCHEM_PKA_STRONGEST_ACIDIC>
14.552654017089885
> <JCHEM_PKA_STRONGEST_BASIC>
-2.994467889423931
> <JCHEM_POLAR_SURFACE_AREA>
93.2
> <JCHEM_REFRACTIVITY>
135.1145
> <JCHEM_ROTATABLE_BOND_COUNT>
2
> <JCHEM_RULE_OF_FIVE>
1
> <ALOGPS_SOLUBILITY>
3.45e-03 g/l
> <JCHEM_TRADITIONAL_IUPAC>
(1R,3R,5R,10S,14R,15R,17R,18S)-17-hydroxy-6,6,10,14,18-pentamethyl-15-[(1E)-1-[(2R,4S)-4-methyl-5-oxooxolan-2-yl]prop-1-en-2-yl]-2-oxapentacyclo[9.7.0.0^{1,3}.0^{5,10}.0^{14,18}]octadec-11-ene-7,13-dione
> <JCHEM_VEBER_RULE>
0
$$$$
3D-SDF for NP0020117 (Gibbosicolid D)
RDKit 3D
76 81 0 0 0 0 0 0 0 0999 V2000
4.4043 -2.5693 0.0343 C 0 0 0 0 0 0 0 0 0 0 0 0
3.3684 -1.4754 -0.2370 C 0 0 0 0 0 0 0 0 0 0 0 0
3.8308 -0.3587 -0.7684 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3140 -0.2734 -1.0491 C 0 0 1 0 0 0 0 0 0 0 0 0
5.7214 1.1437 -1.3924 C 0 0 0 0 0 0 0 0 0 0 0 0
5.9946 1.7575 -0.0328 C 0 0 2 0 0 0 0 0 0 0 0 0
7.2131 2.6342 -0.0243 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2432 0.6123 0.8668 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6152 0.7425 2.0614 O 0 0 0 0 0 0 0 0 0 0 0 0
5.9967 -0.5328 0.1627 O 0 0 0 0 0 0 0 0 0 0 0 0
2.0052 -1.7804 0.1331 C 0 0 1 0 0 0 0 0 0 0 0 0
1.8160 -2.2554 1.5332 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4106 -1.8995 1.9606 C 0 0 1 0 0 0 0 0 0 0 0 0
0.4006 -0.9213 2.9477 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.2092 -1.4564 0.6800 C 0 0 2 0 0 0 0 0 0 0 0 0
-0.5942 -2.6799 -0.1095 C 0 0 0 0 0 0 0 0 0 0 0 0
0.9470 -0.7336 -0.0361 C 0 0 1 0 0 0 0 0 0 0 0 0
1.2247 0.5864 0.5742 C 0 0 0 0 0 0 0 0 0 0 0 0
0.4773 -0.5731 -1.4180 C 0 0 0 0 0 0 0 0 0 0 0 0
1.2369 -0.6948 -2.4254 O 0 0 0 0 0 0 0 0 0 0 0 0
-0.9420 -0.2583 -1.6022 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.8076 -0.2424 -0.6121 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2341 0.0903 -0.8983 C 0 0 1 0 0 0 0 0 0 0 0 0
-3.2505 1.0117 -2.0845 C 0 0 0 0 0 0 0 0 0 0 0 0
-4.0896 -1.0903 -1.2039 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.5070 -0.6958 -1.3144 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8788 0.6227 -0.8041 C 0 0 0 0 0 0 0 0 0 0 0 0
-6.9283 1.1100 -1.1898 O 0 0 0 0 0 0 0 0 0 0 0 0
-5.0791 1.4319 0.1560 C 0 0 1 0 0 0 0 0 0 0 0 0
-4.9632 2.8720 -0.2100 C 0 0 0 0 0 0 0 0 0 0 0 0
-5.8498 1.3711 1.4840 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.7953 0.7174 0.3648 C 0 0 2 0 0 0 0 0 0 0 0 0
-2.7274 1.4530 1.0995 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.7636 0.4100 1.6827 C 0 0 1 0 0 0 0 0 0 0 0 0
-2.3274 -0.9611 1.6922 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.3538 -0.5490 0.7788 C 0 0 2 0 0 0 0 0 0 0 0 0
5.2047 -2.5383 -0.7274 H 0 0 0 0 0 0 0 0 0 0 0 0
3.9273 -3.5692 -0.0528 H 0 0 0 0 0 0 0 0 0 0 0 0
4.8742 -2.3863 1.0137 H 0 0 0 0 0 0 0 0 0 0 0 0
3.2531 0.5110 -1.0412 H 0 0 0 0 0 0 0 0 0 0 0 0
5.5973 -0.9199 -1.8815 H 0 0 0 0 0 0 0 0 0 0 0 0
6.6750 1.1226 -1.9517 H 0 0 0 0 0 0 0 0 0 0 0 0
4.9096 1.6655 -1.9052 H 0 0 0 0 0 0 0 0 0 0 0 0
5.1071 2.3570 0.2670 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8172 2.5341 0.8976 H 0 0 0 0 0 0 0 0 0 0 0 0
6.9274 3.7202 -0.0897 H 0 0 0 0 0 0 0 0 0 0 0 0
7.8763 2.4255 -0.8866 H 0 0 0 0 0 0 0 0 0 0 0 0
1.6720 -2.6334 -0.5603 H 0 0 0 0 0 0 0 0 0 0 0 0
2.5682 -1.8781 2.2475 H 0 0 0 0 0 0 0 0 0 0 0 0
1.9309 -3.3777 1.5591 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.1169 -2.8204 2.2915 H 0 0 0 0 0 0 0 0 0 0 0 0
1.1868 -0.9883 3.5411 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.6861 -2.8806 -0.0134 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.2768 -2.5815 -1.1476 H 0 0 0 0 0 0 0 0 0 0 0 0
-0.0964 -3.5938 0.3037 H 0 0 0 0 0 0 0 0 0 0 0 0
2.2377 0.5843 1.0296 H 0 0 0 0 0 0 0 0 0 0 0 0
1.2299 1.3655 -0.2126 H 0 0 0 0 0 0 0 0 0 0 0 0
0.5546 0.8739 1.4164 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.2392 -0.0332 -2.6368 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.1280 1.6397 -2.1952 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.2226 0.3467 -2.9980 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.3486 1.6638 -2.1128 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.9605 -1.8730 -0.3995 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.7591 -1.5830 -2.1347 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.8389 -0.7513 -2.3911 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.1417 -1.4739 -0.8021 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.5959 3.1723 -1.0795 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.2991 3.5615 0.6206 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.8847 3.1711 -0.3667 H 0 0 0 0 0 0 0 0 0 0 0 0
-6.9286 1.5260 1.2764 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.4093 2.1061 2.1609 H 0 0 0 0 0 0 0 0 0 0 0 0
-5.7615 0.3794 1.9582 H 0 0 0 0 0 0 0 0 0 0 0 0
-4.0440 -0.1717 1.0265 H 0 0 0 0 0 0 0 0 0 0 0 0
-2.1207 2.0172 0.3461 H 0 0 0 0 0 0 0 0 0 0 0 0
-3.1519 2.0973 1.8816 H 0 0 0 0 0 0 0 0 0 0 0 0
-1.4582 0.6469 2.7031 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
2 3 2 0
3 4 1 0
4 5 1 0
5 6 1 0
6 7 1 0
6 8 1 0
8 9 2 0
8 10 1 0
2 11 1 0
11 12 1 0
12 13 1 0
13 14 1 0
13 15 1 0
15 16 1 6
15 17 1 0
17 18 1 1
17 19 1 0
19 20 2 0
19 21 1 0
21 22 2 0
22 23 1 0
23 24 1 6
23 25 1 0
25 26 1 0
26 27 1 0
27 28 2 0
27 29 1 0
29 30 1 6
29 31 1 0
29 32 1 0
32 33 1 0
33 34 1 0
34 35 1 0
36 35 1 1
10 4 1 0
17 11 1 0
36 22 1 0
36 15 1 0
32 23 1 0
36 34 1 0
1 37 1 0
1 38 1 0
1 39 1 0
3 40 1 0
4 41 1 6
5 42 1 0
5 43 1 0
6 44 1 1
7 45 1 0
7 46 1 0
7 47 1 0
11 48 1 6
12 49 1 0
12 50 1 0
13 51 1 1
14 52 1 0
16 53 1 0
16 54 1 0
16 55 1 0
18 56 1 0
18 57 1 0
18 58 1 0
21 59 1 0
24 60 1 0
24 61 1 0
24 62 1 0
25 63 1 0
25 64 1 0
26 65 1 0
26 66 1 0
30 67 1 0
30 68 1 0
30 69 1 0
31 70 1 0
31 71 1 0
31 72 1 0
32 73 1 1
33 74 1 0
33 75 1 0
34 76 1 1
M END
PDB for NP0020117 (Gibbosicolid D)HEADER PROTEIN 04-JUL-21 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 04-JUL-21 0 HETATM 1 C UNK 0 4.404 -2.569 0.034 0.00 0.00 C+0 HETATM 2 C UNK 0 3.368 -1.475 -0.237 0.00 0.00 C+0 HETATM 3 C UNK 0 3.831 -0.359 -0.768 0.00 0.00 C+0 HETATM 4 C UNK 0 5.314 -0.273 -1.049 0.00 0.00 C+0 HETATM 5 C UNK 0 5.721 1.144 -1.392 0.00 0.00 C+0 HETATM 6 C UNK 0 5.995 1.758 -0.033 0.00 0.00 C+0 HETATM 7 C UNK 0 7.213 2.634 -0.024 0.00 0.00 C+0 HETATM 8 C UNK 0 6.243 0.612 0.867 0.00 0.00 C+0 HETATM 9 O UNK 0 6.615 0.743 2.061 0.00 0.00 O+0 HETATM 10 O UNK 0 5.997 -0.533 0.163 0.00 0.00 O+0 HETATM 11 C UNK 0 2.005 -1.780 0.133 0.00 0.00 C+0 HETATM 12 C UNK 0 1.816 -2.255 1.533 0.00 0.00 C+0 HETATM 13 C UNK 0 0.411 -1.900 1.961 0.00 0.00 C+0 HETATM 14 O UNK 0 0.401 -0.921 2.948 0.00 0.00 O+0 HETATM 15 C UNK 0 -0.209 -1.456 0.680 0.00 0.00 C+0 HETATM 16 C UNK 0 -0.594 -2.680 -0.110 0.00 0.00 C+0 HETATM 17 C UNK 0 0.947 -0.734 -0.036 0.00 0.00 C+0 HETATM 18 C UNK 0 1.225 0.586 0.574 0.00 0.00 C+0 HETATM 19 C UNK 0 0.477 -0.573 -1.418 0.00 0.00 C+0 HETATM 20 O UNK 0 1.237 -0.695 -2.425 0.00 0.00 O+0 HETATM 21 C UNK 0 -0.942 -0.258 -1.602 0.00 0.00 C+0 HETATM 22 C UNK 0 -1.808 -0.242 -0.612 0.00 0.00 C+0 HETATM 23 C UNK 0 -3.234 0.090 -0.898 0.00 0.00 C+0 HETATM 24 C UNK 0 -3.251 1.012 -2.084 0.00 0.00 C+0 HETATM 25 C UNK 0 -4.090 -1.090 -1.204 0.00 0.00 C+0 HETATM 26 C UNK 0 -5.507 -0.696 -1.314 0.00 0.00 C+0 HETATM 27 C UNK 0 -5.879 0.623 -0.804 0.00 0.00 C+0 HETATM 28 O UNK 0 -6.928 1.110 -1.190 0.00 0.00 O+0 HETATM 29 C UNK 0 -5.079 1.432 0.156 0.00 0.00 C+0 HETATM 30 C UNK 0 -4.963 2.872 -0.210 0.00 0.00 C+0 HETATM 31 C UNK 0 -5.850 1.371 1.484 0.00 0.00 C+0 HETATM 32 C UNK 0 -3.795 0.717 0.365 0.00 0.00 C+0 HETATM 33 C UNK 0 -2.727 1.453 1.099 0.00 0.00 C+0 HETATM 34 C UNK 0 -1.764 0.410 1.683 0.00 0.00 C+0 HETATM 35 O UNK 0 -2.327 -0.961 1.692 0.00 0.00 O+0 HETATM 36 C UNK 0 -1.354 -0.549 0.779 0.00 0.00 C+0 HETATM 37 H UNK 0 5.205 -2.538 -0.727 0.00 0.00 H+0 HETATM 38 H UNK 0 3.927 -3.569 -0.053 0.00 0.00 H+0 HETATM 39 H UNK 0 4.874 -2.386 1.014 0.00 0.00 H+0 HETATM 40 H UNK 0 3.253 0.511 -1.041 0.00 0.00 H+0 HETATM 41 H UNK 0 5.597 -0.920 -1.882 0.00 0.00 H+0 HETATM 42 H UNK 0 6.675 1.123 -1.952 0.00 0.00 H+0 HETATM 43 H UNK 0 4.910 1.666 -1.905 0.00 0.00 H+0 HETATM 44 H UNK 0 5.107 2.357 0.267 0.00 0.00 H+0 HETATM 45 H UNK 0 7.817 2.534 0.898 0.00 0.00 H+0 HETATM 46 H UNK 0 6.927 3.720 -0.090 0.00 0.00 H+0 HETATM 47 H UNK 0 7.876 2.426 -0.887 0.00 0.00 H+0 HETATM 48 H UNK 0 1.672 -2.633 -0.560 0.00 0.00 H+0 HETATM 49 H UNK 0 2.568 -1.878 2.248 0.00 0.00 H+0 HETATM 50 H UNK 0 1.931 -3.378 1.559 0.00 0.00 H+0 HETATM 51 H UNK 0 -0.117 -2.820 2.292 0.00 0.00 H+0 HETATM 52 H UNK 0 1.187 -0.988 3.541 0.00 0.00 H+0 HETATM 53 H UNK 0 -1.686 -2.881 -0.013 0.00 0.00 H+0 HETATM 54 H UNK 0 -0.277 -2.582 -1.148 0.00 0.00 H+0 HETATM 55 H UNK 0 -0.096 -3.594 0.304 0.00 0.00 H+0 HETATM 56 H UNK 0 2.238 0.584 1.030 0.00 0.00 H+0 HETATM 57 H UNK 0 1.230 1.365 -0.213 0.00 0.00 H+0 HETATM 58 H UNK 0 0.555 0.874 1.416 0.00 0.00 H+0 HETATM 59 H UNK 0 -1.239 -0.033 -2.637 0.00 0.00 H+0 HETATM 60 H UNK 0 -4.128 1.640 -2.195 0.00 0.00 H+0 HETATM 61 H UNK 0 -3.223 0.347 -2.998 0.00 0.00 H+0 HETATM 62 H UNK 0 -2.349 1.664 -2.113 0.00 0.00 H+0 HETATM 63 H UNK 0 -3.961 -1.873 -0.400 0.00 0.00 H+0 HETATM 64 H UNK 0 -3.759 -1.583 -2.135 0.00 0.00 H+0 HETATM 65 H UNK 0 -5.839 -0.751 -2.391 0.00 0.00 H+0 HETATM 66 H UNK 0 -6.142 -1.474 -0.802 0.00 0.00 H+0 HETATM 67 H UNK 0 -5.596 3.172 -1.079 0.00 0.00 H+0 HETATM 68 H UNK 0 -5.299 3.562 0.621 0.00 0.00 H+0 HETATM 69 H UNK 0 -3.885 3.171 -0.367 0.00 0.00 H+0 HETATM 70 H UNK 0 -6.929 1.526 1.276 0.00 0.00 H+0 HETATM 71 H UNK 0 -5.409 2.106 2.161 0.00 0.00 H+0 HETATM 72 H UNK 0 -5.761 0.379 1.958 0.00 0.00 H+0 HETATM 73 H UNK 0 -4.044 -0.172 1.026 0.00 0.00 H+0 HETATM 74 H UNK 0 -2.121 2.017 0.346 0.00 0.00 H+0 HETATM 75 H UNK 0 -3.152 2.097 1.882 0.00 0.00 H+0 HETATM 76 H UNK 0 -1.458 0.647 2.703 0.00 0.00 H+0 CONECT 1 2 37 38 39 CONECT 2 1 3 11 CONECT 3 2 4 40 CONECT 4 3 5 10 41 CONECT 5 4 6 42 43 CONECT 6 5 7 8 44 CONECT 7 6 45 46 47 CONECT 8 6 9 10 CONECT 9 8 CONECT 10 8 4 CONECT 11 2 12 17 48 CONECT 12 11 13 49 50 CONECT 13 12 14 15 51 CONECT 14 13 52 CONECT 15 13 16 17 36 CONECT 16 15 53 54 55 CONECT 17 15 18 19 11 CONECT 18 17 56 57 58 CONECT 19 17 20 21 CONECT 20 19 CONECT 21 19 22 59 CONECT 22 21 23 36 CONECT 23 22 24 25 32 CONECT 24 23 60 61 62 CONECT 25 23 26 63 64 CONECT 26 25 27 65 66 CONECT 27 26 28 29 CONECT 28 27 CONECT 29 27 30 31 32 CONECT 30 29 67 68 69 CONECT 31 29 70 71 72 CONECT 32 29 33 23 73 CONECT 33 32 34 74 75 CONECT 34 33 35 36 76 CONECT 35 34 36 CONECT 36 35 22 15 34 CONECT 37 1 CONECT 38 1 CONECT 39 1 CONECT 40 3 CONECT 41 4 CONECT 42 5 CONECT 43 5 CONECT 44 6 CONECT 45 7 CONECT 46 7 CONECT 47 7 CONECT 48 11 CONECT 49 12 CONECT 50 12 CONECT 51 13 CONECT 52 14 CONECT 53 16 CONECT 54 16 CONECT 55 16 CONECT 56 18 CONECT 57 18 CONECT 58 18 CONECT 59 21 CONECT 60 24 CONECT 61 24 CONECT 62 24 CONECT 63 25 CONECT 64 25 CONECT 65 26 CONECT 66 26 CONECT 67 30 CONECT 68 30 CONECT 69 30 CONECT 70 31 CONECT 71 31 CONECT 72 31 CONECT 73 32 CONECT 74 33 CONECT 75 33 CONECT 76 34 MASTER 0 0 0 0 0 0 0 0 76 0 162 0 END SMILES for NP0020117 (Gibbosicolid D)[H]O[C@]1([H])C([H])([H])[C@]([H])(C(=C(/[H])[C@]2([H])OC(=O)[C@@]([H])(C([H])([H])[H])C2([H])[H])\C([H])([H])[H])[C@]2(C(=O)C([H])=C3[C@@]4(O[C@]4([H])C([H])([H])[C@@]4([H])C(C(=O)C([H])([H])C([H])([H])[C@]34C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H])[C@]12C([H])([H])[H])C([H])([H])[H] INCHI for NP0020117 (Gibbosicolid D)InChI=1S/C30H40O6/c1-15(10-17-11-16(2)25(34)35-17)18-12-23(33)29(7)28(18,6)22(32)13-20-27(5)9-8-21(31)26(3,4)19(27)14-24-30(20,29)36-24/h10,13,16-19,23-24,33H,8-9,11-12,14H2,1-7H3/b15-10+/t16-,17-,18+,19-,23+,24+,27-,28-,29+,30-/m0/s1 3D Structure for NP0020117 (Gibbosicolid D) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Synonyms | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemical Formula | C30H40O6 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Average Mass | 496.6440 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Monoisotopic Mass | 496.28249 Da | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IUPAC Name | (1R,3R,5R,10S,14R,15R,17R,18S)-17-hydroxy-6,6,10,14,18-pentamethyl-15-[(1E)-1-[(2R,4S)-4-methyl-5-oxooxolan-2-yl]prop-1-en-2-yl]-2-oxapentacyclo[9.7.0.0^{1,3}.0^{5,10}.0^{14,18}]octadec-11-ene-7,13-dione | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Traditional Name | (1R,3R,5R,10S,14R,15R,17R,18S)-17-hydroxy-6,6,10,14,18-pentamethyl-15-[(1E)-1-[(2R,4S)-4-methyl-5-oxooxolan-2-yl]prop-1-en-2-yl]-2-oxapentacyclo[9.7.0.0^{1,3}.0^{5,10}.0^{14,18}]octadec-11-ene-7,13-dione | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SMILES | C[C@H]1C[C@@H](OC1=O)C=C(C)[C@H]1C[C@@H](O)[C@@]2(C)[C@@]34O[C@@H]3C[C@H]3C(C)(C)C(=O)CC[C@]3(C)C4=CC(=O)[C@]12C | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Identifier | InChI=1S/C30H40O6/c1-15(10-17-11-16(2)25(34)35-17)18-12-23(33)29(7)28(18,6)22(32)13-20-27(5)9-8-21(31)26(3,4)19(27)14-24-30(20,29)36-24/h10,13,16-19,23-24,33H,8-9,11-12,14H2,1-7H3/t16-,17-,18+,19-,23+,24+,27-,28-,29+,30-/m0/s1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InChI Key | DBCOZDMIVDWFEY-UDIMBENTSA-N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Predicted Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Chemical Shift Submissions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species of Origin |
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| Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Classification | Not classified | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| State | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Properties |
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| Predicted Properties |
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| External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NPAtlas ID | NPA025433 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HMDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| FoodDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Chemspider ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KEGG Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BioCyc ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PubChem Compound | 145721196 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChEBI ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Good Scents ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| General References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
