NP-MRD: Showing NP-Card for Thiocladospolide A (NP0019653)

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Record Information

Version

2.0

Created at

2021-01-06 05:11:11 UTC

Updated at

2026-02-04 08:00:46 UTC

NP-MRD ID

NP0019653

Natural Product DOI

https://doi.org/10.57994/5299

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Thiocladospolide A

Provided By

NPAtlas

Description

Thiocladospolide A is found in Cladosporium and Cladosporium cladosporioides. Thiocladospolide A was first documented in 2019 (PMID: 31038952). Based on a literature review very few articles have been published on methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulfanyl}propanoate.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242120183D          

 49 49  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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  Mrv1652306242120183D          

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 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22  9  1  0  0  0  0
  1 24  1  0  0  0  0
  1 25  1  0  0  0  0
  1 26  1  0  0  0  0
  5 27  1  1  0  0  0
  6 28  1  0  0  0  0
  7 29  1  0  0  0  0
  7 30  1  0  0  0  0
  9 31  1  1  0  0  0
 10 32  1  0  0  0  0
 10 33  1  0  0  0  0
 13 34  1  0  0  0  0
 13 35  1  0  0  0  0
 14 36  1  0  0  0  0
 14 37  1  0  0  0  0
 15 38  1  0  0  0  0
 15 39  1  0  0  0  0
 16 40  1  0  0  0  0
 16 41  1  0  0  0  0
 17 42  1  0  0  0  0
 17 43  1  0  0  0  0
 18 44  1  0  0  0  0
 18 45  1  0  0  0  0
 19 46  1  6  0  0  0
 20 47  1  0  0  0  0
 20 48  1  0  0  0  0
 20 49  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0019653

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]([H])(C(=O)OC([H])([H])[H])C([H])([H])S[C@]1([H])C(=O)O[C@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C(=O)C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C16H26O6S/c1-11-7-5-3-4-6-8-12(17)9-14(16(20)22-11)23-10-13(18)15(19)21-2/h11,13-14,18H,3-10H2,1-2H3/t11-,13-,14+/m1/s1

> <INCHI_KEY>
HFADDBYELHNUNP-BNOWGMLFSA-N

> <FORMULA>
C16H26O6S

> <MOLECULAR_WEIGHT>
346.44

> <EXACT_MASS>
346.145009731

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
49

> <JCHEM_AVERAGE_POLARIZABILITY>
36.43351027295573

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulfanyl}propanoate

> <ALOGPS_LOGP>
1.82

> <JCHEM_LOGP>
2.1005996923333328

> <ALOGPS_LOGS>
-3.29

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.935168594801702

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.389219269221396

> <JCHEM_PKA_STRONGEST_BASIC>
-3.940701230303227

> <JCHEM_POLAR_SURFACE_AREA>
89.9

> <JCHEM_REFRACTIVITY>
86.786

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.78e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulfanyl}propanoate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 49 49  0  0  0  0  0  0  0  0999 V2000
    6.9464    0.6179   -0.8956 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1786   -0.5588   -0.7647 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0750   -0.6583    0.0815 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7641    0.3376    0.7432 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2932   -1.9309    0.1839 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8046   -2.9091   -0.6318 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8238   -1.6542   -0.0592 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2678   -0.4934    1.1817 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.5175   -0.0575    1.0261 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1716    0.9258    2.1276 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7051    2.0249    1.6984 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2295    3.1476    1.6230 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1388    1.8953    1.3416 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9097    0.9410    2.1788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0225    0.1982    1.5655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3709    0.4696    0.1528 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9431   -0.6104   -0.8176 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5418   -1.1008   -0.5958 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5967   -0.6629   -1.6661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2549    0.3309   -2.6371 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3421   -0.2629   -1.2767 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2022    0.4885   -0.3194 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5008    1.7194   -0.4585 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3165    0.6750   -1.9532 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3136    1.5132   -0.6656 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8085    0.5470   -0.2127 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4470   -2.2786    1.2438 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1852   -2.5877   -1.4765 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7550   -1.2579   -1.1040 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3045   -2.6514    0.0193 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0328   -0.9962    1.2632 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1271    1.3613    2.4860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2114    0.3802    3.0323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1514    1.6805    0.2567 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6062    2.8939    1.4576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1792    0.1879    2.6014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2218    1.5059    3.1116 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8746   -0.9239    1.6419 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9299    0.3485    2.2297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5047    0.4730    0.0716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1139    1.4997   -0.2079 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1466   -0.2466   -1.8283 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6284   -1.4668   -0.6462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5446   -2.2249   -0.5783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2349   -0.8295    0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -1.5639   -2.3414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7158    1.1721   -2.1252 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8481   -0.1786   -3.3886 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3735    0.7704   -3.1970 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  0
 22 23  2  0
 22  9  1  0
  1 24  1  0
  1 25  1  0
  1 26  1  0
  5 27  1  1
  6 28  1  0
  7 29  1  0
  7 30  1  0
  9 31  1  1
 10 32  1  0
 10 33  1  0
 13 34  1  0
 13 35  1  0
 14 36  1  0
 14 37  1  0
 15 38  1  0
 15 39  1  0
 16 40  1  0
 16 41  1  0
 17 42  1  0
 17 43  1  0
 18 44  1  0
 18 45  1  0
 19 46  1  6
 20 47  1  0
 20 48  1  0
 20 49  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       6.946   0.618  -0.896  0.00  0.00           C+0
HETATM    2  O   UNK     0       6.179  -0.559  -0.765  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.075  -0.658   0.082  0.00  0.00           C+0
HETATM    4  O   UNK     0       4.764   0.338   0.743  0.00  0.00           O+0
HETATM    5  C   UNK     0       4.293  -1.931   0.184  0.00  0.00           C+0
HETATM    6  O   UNK     0       4.805  -2.909  -0.632  0.00  0.00           O+0
HETATM    7  C   UNK     0       2.824  -1.654  -0.059  0.00  0.00           C+0
HETATM    8  S   UNK     0       2.268  -0.493   1.182  0.00  0.00           S+0
HETATM    9  C   UNK     0       0.518  -0.058   1.026  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.172   0.926   2.128  0.00  0.00           C+0
HETATM   11  C   UNK     0      -0.705   2.025   1.698  0.00  0.00           C+0
HETATM   12  O   UNK     0      -0.230   3.148   1.623  0.00  0.00           O+0
HETATM   13  C   UNK     0      -2.139   1.895   1.342  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.910   0.941   2.179  0.00  0.00           C+0
HETATM   15  C   UNK     0      -4.022   0.198   1.565  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.371   0.470   0.153  0.00  0.00           C+0
HETATM   17  C   UNK     0      -3.943  -0.610  -0.818  0.00  0.00           C+0
HETATM   18  C   UNK     0      -2.542  -1.101  -0.596  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.597  -0.663  -1.666  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.255   0.331  -2.637  0.00  0.00           C+0
HETATM   21  O   UNK     0      -0.342  -0.263  -1.277  0.00  0.00           O+0
HETATM   22  C   UNK     0       0.202   0.489  -0.319  0.00  0.00           C+0
HETATM   23  O   UNK     0       0.501   1.719  -0.459  0.00  0.00           O+0
HETATM   24  H   UNK     0       7.316   0.675  -1.953  0.00  0.00           H+0
HETATM   25  H   UNK     0       6.314   1.513  -0.666  0.00  0.00           H+0
HETATM   26  H   UNK     0       7.809   0.547  -0.213  0.00  0.00           H+0
HETATM   27  H   UNK     0       4.447  -2.279   1.244  0.00  0.00           H+0
HETATM   28  H   UNK     0       5.185  -2.588  -1.476  0.00  0.00           H+0
HETATM   29  H   UNK     0       2.755  -1.258  -1.104  0.00  0.00           H+0
HETATM   30  H   UNK     0       2.305  -2.651   0.019  0.00  0.00           H+0
HETATM   31  H   UNK     0      -0.033  -0.996   1.263  0.00  0.00           H+0
HETATM   32  H   UNK     0       1.127   1.361   2.486  0.00  0.00           H+0
HETATM   33  H   UNK     0      -0.211   0.380   3.032  0.00  0.00           H+0
HETATM   34  H   UNK     0      -2.151   1.681   0.257  0.00  0.00           H+0
HETATM   35  H   UNK     0      -2.606   2.894   1.458  0.00  0.00           H+0
HETATM   36  H   UNK     0      -2.179   0.188   2.601  0.00  0.00           H+0
HETATM   37  H   UNK     0      -3.222   1.506   3.112  0.00  0.00           H+0
HETATM   38  H   UNK     0      -3.875  -0.924   1.642  0.00  0.00           H+0
HETATM   39  H   UNK     0      -4.930   0.349   2.230  0.00  0.00           H+0
HETATM   40  H   UNK     0      -5.505   0.473   0.072  0.00  0.00           H+0
HETATM   41  H   UNK     0      -4.114   1.500  -0.208  0.00  0.00           H+0
HETATM   42  H   UNK     0      -4.147  -0.247  -1.828  0.00  0.00           H+0
HETATM   43  H   UNK     0      -4.628  -1.467  -0.646  0.00  0.00           H+0
HETATM   44  H   UNK     0      -2.545  -2.225  -0.578  0.00  0.00           H+0
HETATM   45  H   UNK     0      -2.235  -0.830   0.436  0.00  0.00           H+0
HETATM   46  H   UNK     0      -1.430  -1.564  -2.341  0.00  0.00           H+0
HETATM   47  H   UNK     0      -2.716   1.172  -2.125  0.00  0.00           H+0
HETATM   48  H   UNK     0      -2.848  -0.179  -3.389  0.00  0.00           H+0
HETATM   49  H   UNK     0      -1.373   0.770  -3.197  0.00  0.00           H+0
CONECT    1    2   24   25   26                                             
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7   27                                             
CONECT    6    5   28                                                       
CONECT    7    5    8   29   30                                             
CONECT    8    7    9                                                       
CONECT    9    8   10   22   31                                             
CONECT   10    9   11   32   33                                             
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   34   35                                             
CONECT   14   13   15   36   37                                             
CONECT   15   14   16   38   39                                             
CONECT   16   15   17   40   41                                             
CONECT   17   16   18   42   43                                             
CONECT   18   17   19   44   45                                             
CONECT   19   18   20   21   46                                             
CONECT   20   19   47   48   49                                             
CONECT   21   19   22                                                       
CONECT   22   21   23    9                                                  
CONECT   23   22                                                            
CONECT   24    1                                                            
CONECT   25    1                                                            
CONECT   26    1                                                            
CONECT   27    5                                                            
CONECT   28    6                                                            
CONECT   29    7                                                            
CONECT   30    7                                                            
CONECT   31    9                                                            
CONECT   32   10                                                            
CONECT   33   10                                                            
CONECT   34   13                                                            
CONECT   35   13                                                            
CONECT   36   14                                                            
CONECT   37   14                                                            
CONECT   38   15                                                            
CONECT   39   15                                                            
CONECT   40   16                                                            
CONECT   41   16                                                            
CONECT   42   17                                                            
CONECT   43   17                                                            
CONECT   44   18                                                            
CONECT   45   18                                                            
CONECT   46   19                                                            
CONECT   47   20                                                            
CONECT   48   20                                                            
CONECT   49   20                                                            
MASTER        0    0    0    0    0    0    0    0   49    0   98    0
END

RDKit          3D

49 49  0  0  0  0  0  0  0  0999 V2000
    6.9464    0.6179   -0.8956 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1786   -0.5588   -0.7647 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0750   -0.6583    0.0815 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7641    0.3376    0.7432 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2932   -1.9309    0.1839 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8046   -2.9091   -0.6318 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8238   -1.6542   -0.0592 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2678   -0.4934    1.1817 S   0  0  0  0  0  0  0  0  0  0  0  0
    0.5175   -0.0575    1.0261 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.1716    0.9258    2.1276 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7051    2.0249    1.6984 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2295    3.1476    1.6230 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1388    1.8953    1.3416 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9097    0.9410    2.1788 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0225    0.1982    1.5655 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3709    0.4696    0.1528 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9431   -0.6104   -0.8176 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5418   -1.1008   -0.5958 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5967   -0.6629   -1.6661 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.2549    0.3309   -2.6371 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3421   -0.2629   -1.2767 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2022    0.4885   -0.3194 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5008    1.7194   -0.4585 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3165    0.6750   -1.9532 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3136    1.5132   -0.6656 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8085    0.5470   -0.2127 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4470   -2.2786    1.2438 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1852   -2.5877   -1.4765 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7550   -1.2579   -1.1040 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3045   -2.6514    0.0193 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0328   -0.9962    1.2632 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1271    1.3613    2.4860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2114    0.3802    3.0323 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1514    1.6805    0.2567 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6062    2.8939    1.4576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1792    0.1879    2.6014 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2218    1.5059    3.1116 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8746   -0.9239    1.6419 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9299    0.3485    2.2297 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5047    0.4730    0.0716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1139    1.4997   -0.2079 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1466   -0.2466   -1.8283 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6284   -1.4668   -0.6462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5446   -2.2249   -0.5783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2349   -0.8295    0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4296   -1.5639   -2.3414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7158    1.1721   -2.1252 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8481   -0.1786   -3.3886 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3735    0.7704   -3.1970 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 19 21  1  0
 21 22  1  0
 22 23  2  0
 22  9  1  0
  1 24  1  0
  1 25  1  0
  1 26  1  0
  5 27  1  1
  6 28  1  0
  7 29  1  0
  7 30  1  0
  9 31  1  1
 10 32  1  0
 10 33  1  0
 13 34  1  0
 13 35  1  0
 14 36  1  0
 14 37  1  0
 15 38  1  0
 15 39  1  0
 16 40  1  0
 16 41  1  0
 17 42  1  0
 17 43  1  0
 18 44  1  0
 18 45  1  0
 19 46  1  6
 20 47  1  0
 20 48  1  0
 20 49  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
Methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulfanyl}propanoic acid	Generator
Methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulphanyl}propanoate	Generator
Methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulphanyl}propanoic acid	Generator

Chemical Formula

C₁₆H₂₆O₆S

Average Mass

346.4400 Da

Monoisotopic Mass

346.14501 Da

IUPAC Name

methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulfanyl}propanoate

Traditional Name

methyl (2S)-2-hydroxy-3-{[(3S,12R)-12-methyl-2,5-dioxo-1-oxacyclododecan-3-yl]sulfanyl}propanoate

CAS Registry Number

Not Available

SMILES

COC(=O)[C@H](O)CS[C@H]1CC(=O)CCCCCC[C@@H](C)OC1=O

InChI Identifier

InChI=1S/C16H26O6S/c1-11-7-5-3-4-6-8-12(17)9-14(16(20)22-11)23-10-13(18)15(19)21-2/h11,13-14,18H,3-10H2,1-2H3/t11-,13-,14+/m1/s1

InChI Key

HFADDBYELHNUNP-BNOWGMLFSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 600.0, Dimethylsulfoxide-d6, simulated)	epoynton@sfu.ca	Not Available	Not Available	2026-02-04	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150.0, Dimethylsulfoxide-d6, simulated)	epoynton@sfu.ca	Not Available	Not Available	2026-02-04	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Cladosporium	NPAtlas	31038952
Cladosporium cladosporioides	LOTUS Database	35616633
Cladosporium cladosporioides MA-299		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.82	ALOGPS
logP	2.1	ChemAxon
logS	-3.3	ALOGPS
pKa (Strongest Acidic)	12.39	ChemAxon
pKa (Strongest Basic)	-3.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	89.9 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	86.79 m³·mol⁻¹	ChemAxon
Polarizability	36.43 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA025232

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

76712510

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139053060

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Zhang FZ, Li XM, Yang SQ, Meng LH, Wang BG: Thiocladospolides A-D, 12-Membered Macrolides from the Mangrove-Derived Endophytic Fungus Cladosporium cladosporioides MA-299 and Structure Revision of Pandangolide 3. J Nat Prod. 2019 Jun 28;82(6):1535-1541. doi: 10.1021/acs.jnatprod.8b01091. Epub 2019 Apr 30. [PubMed:31038952 ]
DOI: 10.1021/acs.jnatprod.8b01091
PMID: 31038952

Showing NP-Card for Thiocladospolide A (NP0019653)

MOL for NP0019653 (Thiocladospolide A)

3D MOL for NP0019653 (Thiocladospolide A)

3D SDF for NP0019653 (Thiocladospolide A)

3D-SDF for NP0019653 (Thiocladospolide A)

PDB for NP0019653 (Thiocladospolide A)

3D PDB for NP0019653 (Thiocladospolide A)

SMILES for NP0019653 (Thiocladospolide A)

INCHI for NP0019653 (Thiocladospolide A)

Structure for NP0019653 (Thiocladospolide A)

3D Structure for NP0019653 (Thiocladospolide A)