NP-MRD: Showing NP-Card for Ahpatinin F (NP0019463)

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Record Information

Version

1.0

Created at

2021-01-06 04:58:13 UTC

Updated at

2021-07-15 17:31:02 UTC

NP-MRD ID

NP0019463

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Ahpatinin F

Provided By

NPAtlas

Description

Ahpatinin F is found in Streptomyces. It was first documented in 1986 (PMID: 3093433). Based on a literature review very few articles have been published on Ahpatinin F (PMID: 34383398) (PMID: 34383397) (PMID: 34383396) (PMID: 34384147) (PMID: 34384146) (PMID: 34384145).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307042107483D          

112112  0  0  0  0            999 V2000
   11.5929    0.6210    1.9715 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

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M  END


  Mrv1652307042107483D          

112112  0  0  0  0            999 V2000
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   10.2304   -1.6672    2.4516 H   0  0  0  0  0  0  0  0  0  0  0  0
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  -10.3471   -1.8678    4.0246 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8120   -2.6541    4.6288 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.4212   -3.7612    2.3395 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6532    0.1023    2.5925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7833    2.3917    2.8397 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0049    2.2242    1.0422 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3812    2.7064    1.7789 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8343    1.1169    1.9885 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5290    0.5055    3.5393 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2010   -0.6358    2.2408 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3328    0.2234   -2.5832 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9367   -1.1810   -4.5360 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2587   -3.6333   -4.2225 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9770   -4.6251   -2.0317 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3896   -3.2754   -0.1405 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
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  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
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  1 54  1  0  0  0  0
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  3 56  1  0  0  0  0
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 49110  1  0  0  0  0
 50111  1  0  0  0  0
 51112  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0019463

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C([H])([H])[C@@]([H])(O[H])[C@@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)C([H])([H])[C@]([H])(O[H])[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C37H61N5O9/c1-20(2)15-26(28(43)18-31(46)38-24(9)35(49)39-27(16-21(3)4)29(44)19-32(47)48)40-36(50)33(23(7)8)42-37(51)34(25-13-11-10-12-14-25)41-30(45)17-22(5)6/h10-14,20-24,26-29,33-34,43-44H,15-19H2,1-9H3,(H,38,46)(H,39,49)(H,40,50)(H,41,45)(H,42,51)(H,47,48)/t24-,26+,27-,28-,29+,33-,34-/m0/s1

> <INCHI_KEY>
MRXGDZORFRGURD-NRTIAEHWSA-N

> <FORMULA>
C37H61N5O9

> <MOLECULAR_WEIGHT>
719.921

> <EXACT_MASS>
719.446928564

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
112

> <JCHEM_AVERAGE_POLARIZABILITY>
80.28033381963277

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
8

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3R,4S)-3-hydroxy-4-[(2S)-2-[(3S,4R)-3-hydroxy-6-methyl-4-[(2S)-3-methyl-2-[(2S)-2-(3-methylbutanamido)-2-phenylacetamido]butanamido]heptanamido]propanamido]-6-methylheptanoic acid

> <ALOGPS_LOGP>
1.66

> <JCHEM_LOGP>
2.1985407573333333

> <ALOGPS_LOGS>
-4.59

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
12.003021288545108

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.315684426589425

> <JCHEM_PKA_STRONGEST_BASIC>
-3.079556778213645

> <JCHEM_POLAR_SURFACE_AREA>
223.26

> <JCHEM_REFRACTIVITY>
190.28760000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
22

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.85e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3R,4S)-3-hydroxy-4-[(2S)-2-[(3S,4R)-3-hydroxy-6-methyl-4-[(2S)-3-methyl-2-[(2S)-2-(3-methylbutanamido)-2-phenylacetamido]butanamido]heptanamido]propanamido]-6-methylheptanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

112112  0  0  0  0  0  0  0  0999 V2000
   11.5929    0.6210    1.9715 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7049    0.2939    3.1581 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.5760   -0.2991    4.2372 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6735   -0.7683    2.7687 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8130   -0.3064    1.6744 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9673    0.8536    1.2106 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.7958   -1.1109    1.0967 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.9571   -0.6185    0.0179 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.5469   -0.7866    0.4086 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2316   -1.8392    1.0318 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5430    0.1504    0.1305 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1307   -0.0188    0.5039 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2581    0.6983   -0.4372 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8419    1.5347   -1.1871 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8648    0.5312   -0.5663 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0104    1.1989   -1.4705 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5723    1.9660   -2.5951 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3105    1.1810   -3.6240 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8870    2.0685   -4.7162 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3357    0.2398   -4.3701 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2113    1.8627   -0.8807 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.8842    2.5738   -1.9111 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2543    0.7784   -0.5222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4167    1.4446    0.0828 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2935    2.6008    0.5980 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6781    0.8025    0.0927 N   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8776    1.3999    0.7046 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.4647    2.3992   -0.3178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8807    0.3845    0.9977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6747   -0.7814    0.5886 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0504    0.6709    1.7247 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0189   -0.3668    2.0345 C   0  0  1  0  0  0  0  0  0  0  0  0
   -9.5397   -1.0567    0.8648 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3162   -0.1976   -0.1314 C   0  0  1  0  0  0  0  0  0  0  0  0
   -9.5466    0.9150   -0.7417 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8644   -1.1323   -1.1894 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5132   -1.1328    3.1948 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.2410   -1.7016    2.9113 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3361   -2.2585    3.7046 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.4647   -3.3681    2.7570 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5668   -3.5910    1.9004 O   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6077   -4.1731    2.8258 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9492    0.6124    1.8923 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2873    2.0685    1.8838 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5697    0.3783    2.4167 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3096   -1.3998   -1.1918 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4697   -0.8405   -2.4417 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8101   -1.6266   -3.5495 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9866   -2.9797   -3.3791 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8343   -3.5495   -2.1613 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4962   -2.7582   -1.0713 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5910    0.9501    2.3795 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7073   -0.3488    1.4033 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.2126    1.4258    1.3395 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.1825    1.1940    3.5568 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7490    0.5024    5.0110 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1008   -1.1567    4.7596 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.5574   -0.5942    3.7993 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1225   -0.9827    3.7099 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2304   -1.6672    2.4516 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6552   -2.0698    1.4610 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2449    0.4495   -0.1779 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7836    1.0240   -0.3723 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9101   -1.0570    0.5879 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3701   -0.1837    0.0769 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5081    0.2498   -2.0221 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2098    2.7858   -2.1958 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2416    2.5332   -3.1565 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0816    0.5251   -3.2572 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6116    1.7368   -5.7375 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4922    3.1028   -4.5521 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9974    2.1303   -4.6404 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8964   -0.0770   -5.2814 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2017   -0.6566   -3.7650 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5705    0.7480   -4.6955 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0084    2.4348    0.0002 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5180    2.0245   -2.4013 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8178    0.0667    0.2065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5110    0.2312   -1.4739 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7855   -0.1320   -0.3459 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5995    2.0409    1.5810 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3614    2.8210    0.1496 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6964    3.1903   -0.5296 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6941    1.8224   -1.2199 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2286    1.6638    2.0679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9677    0.2467    2.4172 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3244   -1.8262    1.1627 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8142   -1.6047    0.2266 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1689    0.2346    0.4458 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1844    1.4236   -1.5329 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6458    0.5972   -1.2758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3650    1.7120    0.0034 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.4475   -1.9429   -0.6737 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0440   -1.5813   -1.7600 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5305   -0.5590   -1.8435 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3046   -0.4557    4.0675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8757   -2.1751    3.6881 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3471   -1.8678    4.0246 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8120   -2.6541    4.6288 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.4212   -3.7612    2.3395 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6532    0.1023    2.5925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7833    2.3917    2.8397 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0049    2.2242    1.0422 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3812    2.7064    1.7789 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8343    1.1169    1.9885 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5290    0.5055    3.5393 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2010   -0.6358    2.2408 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3328    0.2234   -2.5832 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9367   -1.1810   -4.5360 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2587   -3.6333   -4.2225 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.9770   -4.6251   -2.0317 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3896   -3.2754   -0.1405 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 16 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 26 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  2  0
 29 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 34 36  1  0
 32 37  1  0
 37 38  1  0
 37 39  1  0
 39 40  1  0
 40 41  2  0
 40 42  1  0
 12 43  1  0
 43 44  1  0
 43 45  1  0
  8 46  1  0
 46 47  2  0
 47 48  1  0
 48 49  2  0
 49 50  1  0
 50 51  2  0
 51 46  1  0
  1 52  1  0
  1 53  1  0
  1 54  1  0
  2 55  1  1
  3 56  1  0
  3 57  1  0
  3 58  1  0
  4 59  1  0
  4 60  1  0
  7 61  1  0
  8 62  1  6
 11 63  1  0
 12 64  1  1
 15 65  1  0
 16 66  1  6
 17 67  1  0
 17 68  1  0
 18 69  1  1
 19 70  1  0
 19 71  1  0
 19 72  1  0
 20 73  1  0
 20 74  1  0
 20 75  1  0
 21 76  1  1
 22 77  1  0
 23 78  1  0
 23 79  1  0
 26 80  1  0
 27 81  1  1
 28 82  1  0
 28 83  1  0
 28 84  1  0
 31 85  1  0
 32 86  1  1
 33 87  1  0
 33 88  1  0
 34 89  1  1
 35 90  1  0
 35 91  1  0
 35 92  1  0
 36 93  1  0
 36 94  1  0
 36 95  1  0
 37 96  1  1
 38 97  1  0
 39 98  1  0
 39 99  1  0
 42100  1  0
 43101  1  1
 44102  1  0
 44103  1  0
 44104  1  0
 45105  1  0
 45106  1  0
 45107  1  0
 47108  1  0
 48109  1  0
 49110  1  0
 50111  1  0
 51112  1  0
M  END

HEADER    PROTEIN                                 04-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-JUL-21         0                                  
HETATM    1  C   UNK     0      11.593   0.621   1.972  0.00  0.00           C+0
HETATM    2  C   UNK     0      10.705   0.294   3.158  0.00  0.00           C+0
HETATM    3  C   UNK     0      11.576  -0.299   4.237  0.00  0.00           C+0
HETATM    4  C   UNK     0       9.674  -0.768   2.769  0.00  0.00           C+0
HETATM    5  C   UNK     0       8.813  -0.306   1.674  0.00  0.00           C+0
HETATM    6  O   UNK     0       8.967   0.854   1.211  0.00  0.00           O+0
HETATM    7  N   UNK     0       7.796  -1.111   1.097  0.00  0.00           N+0
HETATM    8  C   UNK     0       6.957  -0.619   0.018  0.00  0.00           C+0
HETATM    9  C   UNK     0       5.547  -0.787   0.409  0.00  0.00           C+0
HETATM   10  O   UNK     0       5.232  -1.839   1.032  0.00  0.00           O+0
HETATM   11  N   UNK     0       4.543   0.150   0.131  0.00  0.00           N+0
HETATM   12  C   UNK     0       3.131  -0.019   0.504  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.258   0.698  -0.437  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.842   1.535  -1.187  0.00  0.00           O+0
HETATM   15  N   UNK     0       0.865   0.531  -0.566  0.00  0.00           N+0
HETATM   16  C   UNK     0      -0.010   1.199  -1.470  0.00  0.00           C+0
HETATM   17  C   UNK     0       0.572   1.966  -2.595  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.311   1.181  -3.624  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.887   2.068  -4.716  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.336   0.240  -4.370  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.211   1.863  -0.881  0.00  0.00           C+0
HETATM   22  O   UNK     0      -1.884   2.574  -1.911  0.00  0.00           O+0
HETATM   23  C   UNK     0      -2.254   0.778  -0.522  0.00  0.00           C+0
HETATM   24  C   UNK     0      -3.417   1.445   0.083  0.00  0.00           C+0
HETATM   25  O   UNK     0      -3.293   2.601   0.598  0.00  0.00           O+0
HETATM   26  N   UNK     0      -4.678   0.803   0.093  0.00  0.00           N+0
HETATM   27  C   UNK     0      -5.878   1.400   0.705  0.00  0.00           C+0
HETATM   28  C   UNK     0      -6.465   2.399  -0.318  0.00  0.00           C+0
HETATM   29  C   UNK     0      -6.881   0.385   0.998  0.00  0.00           C+0
HETATM   30  O   UNK     0      -6.675  -0.781   0.589  0.00  0.00           O+0
HETATM   31  N   UNK     0      -8.050   0.671   1.725  0.00  0.00           N+0
HETATM   32  C   UNK     0      -9.019  -0.367   2.034  0.00  0.00           C+0
HETATM   33  C   UNK     0      -9.540  -1.057   0.865  0.00  0.00           C+0
HETATM   34  C   UNK     0     -10.316  -0.198  -0.131  0.00  0.00           C+0
HETATM   35  C   UNK     0      -9.547   0.915  -0.742  0.00  0.00           C+0
HETATM   36  C   UNK     0     -10.864  -1.132  -1.189  0.00  0.00           C+0
HETATM   37  C   UNK     0      -8.513  -1.133   3.195  0.00  0.00           C+0
HETATM   38  O   UNK     0      -7.241  -1.702   2.911  0.00  0.00           O+0
HETATM   39  C   UNK     0      -9.336  -2.259   3.705  0.00  0.00           C+0
HETATM   40  C   UNK     0      -9.465  -3.368   2.757  0.00  0.00           C+0
HETATM   41  O   UNK     0      -8.567  -3.591   1.900  0.00  0.00           O+0
HETATM   42  O   UNK     0     -10.608  -4.173   2.826  0.00  0.00           O+0
HETATM   43  C   UNK     0       2.949   0.612   1.892  0.00  0.00           C+0
HETATM   44  C   UNK     0       3.287   2.068   1.884  0.00  0.00           C+0
HETATM   45  C   UNK     0       1.570   0.378   2.417  0.00  0.00           C+0
HETATM   46  C   UNK     0       7.310  -1.400  -1.192  0.00  0.00           C+0
HETATM   47  C   UNK     0       7.470  -0.841  -2.442  0.00  0.00           C+0
HETATM   48  C   UNK     0       7.810  -1.627  -3.550  0.00  0.00           C+0
HETATM   49  C   UNK     0       7.987  -2.980  -3.379  0.00  0.00           C+0
HETATM   50  C   UNK     0       7.834  -3.550  -2.161  0.00  0.00           C+0
HETATM   51  C   UNK     0       7.496  -2.758  -1.071  0.00  0.00           C+0
HETATM   52  H   UNK     0      12.591   0.950   2.380  0.00  0.00           H+0
HETATM   53  H   UNK     0      11.707  -0.349   1.403  0.00  0.00           H+0
HETATM   54  H   UNK     0      11.213   1.426   1.339  0.00  0.00           H+0
HETATM   55  H   UNK     0      10.182   1.194   3.557  0.00  0.00           H+0
HETATM   56  H   UNK     0      11.749   0.502   5.011  0.00  0.00           H+0
HETATM   57  H   UNK     0      11.101  -1.157   4.760  0.00  0.00           H+0
HETATM   58  H   UNK     0      12.557  -0.594   3.799  0.00  0.00           H+0
HETATM   59  H   UNK     0       9.123  -0.983   3.710  0.00  0.00           H+0
HETATM   60  H   UNK     0      10.230  -1.667   2.452  0.00  0.00           H+0
HETATM   61  H   UNK     0       7.655  -2.070   1.461  0.00  0.00           H+0
HETATM   62  H   UNK     0       7.245   0.450  -0.178  0.00  0.00           H+0
HETATM   63  H   UNK     0       4.784   1.024  -0.372  0.00  0.00           H+0
HETATM   64  H   UNK     0       2.910  -1.057   0.588  0.00  0.00           H+0
HETATM   65  H   UNK     0       0.370  -0.184   0.077  0.00  0.00           H+0
HETATM   66  H   UNK     0      -0.508   0.250  -2.022  0.00  0.00           H+0
HETATM   67  H   UNK     0       1.210   2.786  -2.196  0.00  0.00           H+0
HETATM   68  H   UNK     0      -0.242   2.533  -3.156  0.00  0.00           H+0
HETATM   69  H   UNK     0       2.082   0.525  -3.257  0.00  0.00           H+0
HETATM   70  H   UNK     0       1.612   1.737  -5.737  0.00  0.00           H+0
HETATM   71  H   UNK     0       1.492   3.103  -4.552  0.00  0.00           H+0
HETATM   72  H   UNK     0       2.997   2.130  -4.640  0.00  0.00           H+0
HETATM   73  H   UNK     0       0.896  -0.077  -5.281  0.00  0.00           H+0
HETATM   74  H   UNK     0       0.202  -0.657  -3.765  0.00  0.00           H+0
HETATM   75  H   UNK     0      -0.571   0.748  -4.696  0.00  0.00           H+0
HETATM   76  H   UNK     0      -1.008   2.435   0.000  0.00  0.00           H+0
HETATM   77  H   UNK     0      -2.518   2.025  -2.401  0.00  0.00           H+0
HETATM   78  H   UNK     0      -1.818   0.067   0.207  0.00  0.00           H+0
HETATM   79  H   UNK     0      -2.511   0.231  -1.474  0.00  0.00           H+0
HETATM   80  H   UNK     0      -4.785  -0.132  -0.346  0.00  0.00           H+0
HETATM   81  H   UNK     0      -5.599   2.041   1.581  0.00  0.00           H+0
HETATM   82  H   UNK     0      -7.361   2.821   0.150  0.00  0.00           H+0
HETATM   83  H   UNK     0      -5.696   3.190  -0.530  0.00  0.00           H+0
HETATM   84  H   UNK     0      -6.694   1.822  -1.220  0.00  0.00           H+0
HETATM   85  H   UNK     0      -8.229   1.664   2.068  0.00  0.00           H+0
HETATM   86  H   UNK     0      -9.968   0.247   2.417  0.00  0.00           H+0
HETATM   87  H   UNK     0     -10.324  -1.826   1.163  0.00  0.00           H+0
HETATM   88  H   UNK     0      -8.814  -1.605   0.227  0.00  0.00           H+0
HETATM   89  H   UNK     0     -11.169   0.235   0.446  0.00  0.00           H+0
HETATM   90  H   UNK     0     -10.184   1.424  -1.533  0.00  0.00           H+0
HETATM   91  H   UNK     0      -8.646   0.597  -1.276  0.00  0.00           H+0
HETATM   92  H   UNK     0      -9.365   1.712   0.003  0.00  0.00           H+0
HETATM   93  H   UNK     0     -11.447  -1.943  -0.674  0.00  0.00           H+0
HETATM   94  H   UNK     0     -10.044  -1.581  -1.760  0.00  0.00           H+0
HETATM   95  H   UNK     0     -11.531  -0.559  -1.843  0.00  0.00           H+0
HETATM   96  H   UNK     0      -8.305  -0.456   4.067  0.00  0.00           H+0
HETATM   97  H   UNK     0      -6.876  -2.175   3.688  0.00  0.00           H+0
HETATM   98  H   UNK     0     -10.347  -1.868   4.025  0.00  0.00           H+0
HETATM   99  H   UNK     0      -8.812  -2.654   4.629  0.00  0.00           H+0
HETATM  100  H   UNK     0     -11.421  -3.761   2.340  0.00  0.00           H+0
HETATM  101  H   UNK     0       3.653   0.102   2.592  0.00  0.00           H+0
HETATM  102  H   UNK     0       3.783   2.392   2.840  0.00  0.00           H+0
HETATM  103  H   UNK     0       4.005   2.224   1.042  0.00  0.00           H+0
HETATM  104  H   UNK     0       2.381   2.706   1.779  0.00  0.00           H+0
HETATM  105  H   UNK     0       0.834   1.117   1.988  0.00  0.00           H+0
HETATM  106  H   UNK     0       1.529   0.505   3.539  0.00  0.00           H+0
HETATM  107  H   UNK     0       1.201  -0.636   2.241  0.00  0.00           H+0
HETATM  108  H   UNK     0       7.333   0.223  -2.583  0.00  0.00           H+0
HETATM  109  H   UNK     0       7.937  -1.181  -4.536  0.00  0.00           H+0
HETATM  110  H   UNK     0       8.259  -3.633  -4.223  0.00  0.00           H+0
HETATM  111  H   UNK     0       7.977  -4.625  -2.032  0.00  0.00           H+0
HETATM  112  H   UNK     0       7.390  -3.275  -0.141  0.00  0.00           H+0
CONECT    1    2   52   53   54                                             
CONECT    2    1    3    4   55                                             
CONECT    3    2   56   57   58                                             
CONECT    4    2    5   59   60                                             
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   61                                                  
CONECT    8    7    9   46   62                                             
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   63                                                  
CONECT   12   11   13   43   64                                             
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   65                                                  
CONECT   16   15   17   21   66                                             
CONECT   17   16   18   67   68                                             
CONECT   18   17   19   20   69                                             
CONECT   19   18   70   71   72                                             
CONECT   20   18   73   74   75                                             
CONECT   21   16   22   23   76                                             
CONECT   22   21   77                                                       
CONECT   23   21   24   78   79                                             
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27   80                                                  
CONECT   27   26   28   29   81                                             
CONECT   28   27   82   83   84                                             
CONECT   29   27   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32   85                                                  
CONECT   32   31   33   37   86                                             
CONECT   33   32   34   87   88                                             
CONECT   34   33   35   36   89                                             
CONECT   35   34   90   91   92                                             
CONECT   36   34   93   94   95                                             
CONECT   37   32   38   39   96                                             
CONECT   38   37   97                                                       
CONECT   39   37   40   98   99                                             
CONECT   40   39   41   42                                                  
CONECT   41   40                                                            
CONECT   42   40  100                                                       
CONECT   43   12   44   45  101                                             
CONECT   44   43  102  103  104                                             
CONECT   45   43  105  106  107                                             
CONECT   46    8   47   51                                                  
CONECT   47   46   48  108                                                  
CONECT   48   47   49  109                                                  
CONECT   49   48   50  110                                                  
CONECT   50   49   51  111                                                  
CONECT   51   50   46  112                                                  
CONECT   52    1                                                            
CONECT   53    1                                                            
CONECT   54    1                                                            
CONECT   55    2                                                            
CONECT   56    3                                                            
CONECT   57    3                                                            
CONECT   58    3                                                            
CONECT   59    4                                                            
CONECT   60    4                                                            
CONECT   61    7                                                            
CONECT   62    8                                                            
CONECT   63   11                                                            
CONECT   64   12                                                            
CONECT   65   15                                                            
CONECT   66   16                                                            
CONECT   67   17                                                            
CONECT   68   17                                                            
CONECT   69   18                                                            
CONECT   70   19                                                            
CONECT   71   19                                                            
CONECT   72   19                                                            
CONECT   73   20                                                            
CONECT   74   20                                                            
CONECT   75   20                                                            
CONECT   76   21                                                            
CONECT   77   22                                                            
CONECT   78   23                                                            
CONECT   79   23                                                            
CONECT   80   26                                                            
CONECT   81   27                                                            
CONECT   82   28                                                            
CONECT   83   28                                                            
CONECT   84   28                                                            
CONECT   85   31                                                            
CONECT   86   32                                                            
CONECT   87   33                                                            
CONECT   88   33                                                            
CONECT   89   34                                                            
CONECT   90   35                                                            
CONECT   91   35                                                            
CONECT   92   35                                                            
CONECT   93   36                                                            
CONECT   94   36                                                            
CONECT   95   36                                                            
CONECT   96   37                                                            
CONECT   97   38                                                            
CONECT   98   39                                                            
CONECT   99   39                                                            
CONECT  100   42                                                            
CONECT  101   43                                                            
CONECT  102   44                                                            
CONECT  103   44                                                            
CONECT  104   44                                                            
CONECT  105   45                                                            
CONECT  106   45                                                            
CONECT  107   45                                                            
CONECT  108   47                                                            
CONECT  109   48                                                            
CONECT  110   49                                                            
CONECT  111   50                                                            
CONECT  112   51                                                            
MASTER        0    0    0    0    0    0    0    0  112    0  224    0
END

RDKit          3D

112112  0  0  0  0  0  0  0  0999 V2000
   11.5929    0.6210    1.9715 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7049    0.2939    3.1581 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.5760   -0.2991    4.2372 C   0  0  0  0  0  0  0  0  0  0  0  0
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    8.8130   -0.3064    1.6744 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(3R,4S)-4-{[(2S)-2-{[(3S,4R)-1,3-dihydroxy-4-{[(2S)-1-hydroxy-2-{[(2S)-1-hydroxy-2-[(1-hydroxy-3-methylbutylidene)amino]-2-phenylethylidene]amino}-3-methylbutylidene]amino}-6-methylheptylidene]amino}-1-hydroxypropylidene]amino}-3-hydroxy-6-methylheptanoate	Generator

Chemical Formula

C₃₇H₆₁N₅O₉

Average Mass

719.9210 Da

Monoisotopic Mass

719.44693 Da

IUPAC Name

(3R,4S)-3-hydroxy-4-[(2S)-2-[(3S,4R)-3-hydroxy-6-methyl-4-[(2S)-3-methyl-2-[(2S)-2-(3-methylbutanamido)-2-phenylacetamido]butanamido]heptanamido]propanamido]-6-methylheptanoic acid

Traditional Name

(3R,4S)-3-hydroxy-4-[(2S)-2-[(3S,4R)-3-hydroxy-6-methyl-4-[(2S)-3-methyl-2-[(2S)-2-(3-methylbutanamido)-2-phenylacetamido]butanamido]heptanamido]propanamido]-6-methylheptanoic acid

CAS Registry Number

Not Available

SMILES

CC(C)C[C@H](NC(=O)[C@H](C)NC(=O)C[C@H](O)[C@@H](CC(C)C)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)CC(C)C)C1=CC=CC=C1)C(C)C)[C@H](O)CC(O)=O

InChI Identifier

InChI=1S/C37H61N5O9/c1-20(2)15-26(28(43)18-31(46)38-24(9)35(49)39-27(16-21(3)4)29(44)19-32(47)48)40-36(50)33(23(7)8)42-37(51)34(25-13-11-10-12-14-25)41-30(45)17-22(5)6/h10-14,20-24,26-29,33-34,43-44H,15-19H2,1-9H3,(H,38,46)(H,39,49)(H,40,50)(H,41,45)(H,42,51)(H,47,48)/t24-,26+,27-,28-,29+,33-,34-/m0/s1

InChI Key

MRXGDZORFRGURD-NRTIAEHWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	3093433

Species Where Detected

Species Name	Source	Reference
Streptomyces sp. WK-142	KNApSAcK Database	22123792

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.66	ALOGPS
logP	2.2	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	4.32	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	8	ChemAxon
Polar Surface Area	223.26 Å²	ChemAxon
Rotatable Bond Count	22	ChemAxon
Refractivity	190.29 m³·mol⁻¹	ChemAxon
Polarizability	80.28 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA021368

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00017794

Chemspider ID

78443264

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139589300

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

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Showing NP-Card for Ahpatinin F (NP0019463)

MOL for NP0019463 (Ahpatinin F)

3D MOL for NP0019463 (Ahpatinin F)

3D SDF for NP0019463 (Ahpatinin F)

3D-SDF for NP0019463 (Ahpatinin F)

PDB for NP0019463 (Ahpatinin F)

3D PDB for NP0019463 (Ahpatinin F)

SMILES for NP0019463 (Ahpatinin F)

INCHI for NP0019463 (Ahpatinin F)

Structure for NP0019463 (Ahpatinin F)

3D Structure for NP0019463 (Ahpatinin F)