NP-MRD: Showing NP-Card for Cyafricanin B (NP0019331)

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Record Information

Version

2.0

Created at

2021-01-06 04:52:33 UTC

Updated at

2021-07-15 17:30:41 UTC

NP-MRD ID

NP0019331

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Cyafricanin B

Provided By

NPAtlas

Description

Cyafricanin B is found in Cyathus africanus. Cyafricanin B was first documented in 2019 (PMID: 30831199). Based on a literature review very few articles have been published on Cyafricanin B.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242120153D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306242120153D          

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   -0.2306    2.3071   -1.9441 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2131    2.3111   -0.4610 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0194   -1.1434   -2.9271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7256    0.4975   -3.4961 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3796    0.7173   -2.5996 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3085   -0.8685   -3.3878 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6163   -2.9397   -2.0179 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0883   -2.8785   -0.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0902   -2.6052   -1.6533 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1283    0.8053   -0.2023 H   0  0  0  0  0  0  0  0  0  0  0  0
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    2.2893    2.1581    1.3339 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.3383    0.0617    3.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3220    1.2695    2.4359 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5899    0.4201    3.8022 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
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 15 16  1  6  0  0  0
 15 17  1  0  0  0  0
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 19 20  1  0  0  0  0
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 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 23  3  1  0  0  0  0
 22  5  1  0  0  0  0
 15  9  1  0  0  0  0
 19 13  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
  1 29  1  0  0  0  0
  3 30  1  1  0  0  0
  4 31  1  0  0  0  0
  4 32  1  0  0  0  0
  6 33  1  0  0  0  0
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 25 57  1  0  0  0  0
 26 58  1  0  0  0  0
 26 59  1  0  0  0  0
 26 60  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0019331

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])[C@@]1([H])[C@]2([H])O[C@](O[H])([C@]1([H])O[H])[C@]1(C([H])([H])[H])C([H])([H])C([H])([H])[C@@]3(C(=C(C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]([H])(OC([H])([H])[H])C3([H])[H])[C@@]1([H])C2([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C21H34O5/c1-11(2)16-15(25-5)9-19(3)6-7-20(4)13(17(16)19)8-14-12(10-22)18(23)21(20,24)26-14/h11-15,18,22-24H,6-10H2,1-5H3/t12-,13+,14+,15-,18+,19-,20+,21+/m0/s1

> <INCHI_KEY>
LNOVVADOOMBUOP-RPKDIVBTSA-N

> <FORMULA>
C21H34O5

> <MOLECULAR_WEIGHT>
366.498

> <EXACT_MASS>
366.240624195

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
60

> <JCHEM_AVERAGE_POLARIZABILITY>
40.727955959149014

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2R,5S,7S,10R,12R,13R,14R)-13-(hydroxymethyl)-7-methoxy-2,5-dimethyl-8-(propan-2-yl)-15-oxatetracyclo[10.2.1.0^{2,10}.0^{5,9}]pentadec-8-ene-1,14-diol

> <ALOGPS_LOGP>
2.05

> <JCHEM_LOGP>
1.7586068756666646

> <ALOGPS_LOGS>
-2.90

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.692664819383676

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.77057918941621

> <JCHEM_PKA_STRONGEST_BASIC>
-2.668485417435982

> <JCHEM_POLAR_SURFACE_AREA>
79.15

> <JCHEM_REFRACTIVITY>
98.54289999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.61e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2R,5S,7S,10R,12R,13R,14R)-13-(hydroxymethyl)-8-isopropyl-7-methoxy-2,5-dimethyl-15-oxatetracyclo[10.2.1.0^{2,10}.0^{5,9}]pentadec-8-ene-1,14-diol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

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    3.3048    1.7724    1.3336 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.7123   -0.0891   -0.1406 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.8679   -1.8619    2.0513 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.6163   -2.9397   -2.0179 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0883   -2.8785   -0.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0902   -2.6052   -1.6533 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.9921    0.0299    2.0375 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0656   -1.6902    1.5684 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2301   -1.1679    2.0841 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4027   -1.0047   -2.9070 H   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  1
  5  7  1  0
  7  8  1  0
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  9 10  1  6
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 15 17  1  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 11 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
 23  3  1  0
 22  5  1  0
 15  9  1  0
 19 13  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  3 30  1  1
  4 31  1  0
  4 32  1  0
  6 33  1  0
  6 34  1  0
  6 35  1  0
  7 36  1  0
  7 37  1  0
  8 38  1  0
  8 39  1  0
 10 40  1  0
 10 41  1  0
 10 42  1  0
 11 43  1  6
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 12 45  1  0
 13 46  1  1
 16 47  1  0
 17 48  1  6
 18 49  1  0
 19 50  1  6
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 24 54  1  1
 25 55  1  0
 25 56  1  0
 25 57  1  0
 26 58  1  0
 26 59  1  0
 26 60  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -4.674   1.485   0.759  0.00  0.00           C+0
HETATM    2  O   UNK     0      -3.400   1.418   0.258  0.00  0.00           O+0
HETATM    3  C   UNK     0      -3.020   0.108  -0.031  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.673  -0.054  -1.486  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.228   0.429  -1.453  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.178   1.934  -1.508  0.00  0.00           C+0
HETATM    7  C   UNK     0      -0.527  -0.178  -2.610  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.946  -0.295  -2.493  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.325  -0.995  -1.216  0.00  0.00           C+0
HETATM   10  C   UNK     0       0.933  -2.433  -1.301  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.733  -0.263  -0.055  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.333  -0.654   1.250  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.833  -0.711   1.145  0.00  0.00           C+0
HETATM   14  O   UNK     0       3.112  -1.662   0.130  0.00  0.00           O+0
HETATM   15  C   UNK     0       2.837  -0.956  -1.040  0.00  0.00           C+0
HETATM   16  O   UNK     0       3.407  -1.590  -2.117  0.00  0.00           O+0
HETATM   17  C   UNK     0       3.369   0.442  -0.818  0.00  0.00           C+0
HETATM   18  O   UNK     0       4.611   0.465  -1.503  0.00  0.00           O+0
HETATM   19  C   UNK     0       3.547   0.470   0.660  0.00  0.00           C+0
HETATM   20  C   UNK     0       3.305   1.772   1.334  0.00  0.00           C+0
HETATM   21  O   UNK     0       3.660   1.690   2.704  0.00  0.00           O+0
HETATM   22  C   UNK     0      -0.712  -0.089  -0.141  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.756  -0.262   0.662  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.776  -0.755   2.059  0.00  0.00           C+0
HETATM   25  C   UNK     0      -2.868  -1.862   2.051  0.00  0.00           C+0
HETATM   26  C   UNK     0      -2.341   0.310   2.991  0.00  0.00           C+0
HETATM   27  H   UNK     0      -5.428   1.079   0.035  0.00  0.00           H+0
HETATM   28  H   UNK     0      -4.928   2.580   0.854  0.00  0.00           H+0
HETATM   29  H   UNK     0      -4.826   1.061   1.761  0.00  0.00           H+0
HETATM   30  H   UNK     0      -3.866  -0.560   0.264  0.00  0.00           H+0
HETATM   31  H   UNK     0      -2.760  -1.096  -1.820  0.00  0.00           H+0
HETATM   32  H   UNK     0      -3.273   0.618  -2.119  0.00  0.00           H+0
HETATM   33  H   UNK     0      -2.079   2.370  -2.012  0.00  0.00           H+0
HETATM   34  H   UNK     0      -0.231   2.307  -1.944  0.00  0.00           H+0
HETATM   35  H   UNK     0      -1.213   2.311  -0.461  0.00  0.00           H+0
HETATM   36  H   UNK     0      -1.019  -1.143  -2.927  0.00  0.00           H+0
HETATM   37  H   UNK     0      -0.726   0.498  -3.496  0.00  0.00           H+0
HETATM   38  H   UNK     0       1.380   0.717  -2.600  0.00  0.00           H+0
HETATM   39  H   UNK     0       1.309  -0.869  -3.388  0.00  0.00           H+0
HETATM   40  H   UNK     0       1.616  -2.940  -2.018  0.00  0.00           H+0
HETATM   41  H   UNK     0       1.088  -2.878  -0.282  0.00  0.00           H+0
HETATM   42  H   UNK     0      -0.090  -2.605  -1.653  0.00  0.00           H+0
HETATM   43  H   UNK     0       1.128   0.805  -0.202  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.992   0.030   2.038  0.00  0.00           H+0
HETATM   45  H   UNK     0       1.066  -1.690   1.568  0.00  0.00           H+0
HETATM   46  H   UNK     0       3.230  -1.168   2.084  0.00  0.00           H+0
HETATM   47  H   UNK     0       3.403  -1.005  -2.907  0.00  0.00           H+0
HETATM   48  H   UNK     0       2.783   1.243  -1.252  0.00  0.00           H+0
HETATM   49  H   UNK     0       4.769   1.342  -1.927  0.00  0.00           H+0
HETATM   50  H   UNK     0       4.655   0.250   0.831  0.00  0.00           H+0
HETATM   51  H   UNK     0       3.955   2.582   0.934  0.00  0.00           H+0
HETATM   52  H   UNK     0       2.289   2.158   1.334  0.00  0.00           H+0
HETATM   53  H   UNK     0       4.562   2.041   2.868  0.00  0.00           H+0
HETATM   54  H   UNK     0      -0.926  -1.260   2.448  0.00  0.00           H+0
HETATM   55  H   UNK     0      -2.804  -2.404   1.101  0.00  0.00           H+0
HETATM   56  H   UNK     0      -3.872  -1.362   2.142  0.00  0.00           H+0
HETATM   57  H   UNK     0      -2.732  -2.529   2.928  0.00  0.00           H+0
HETATM   58  H   UNK     0      -3.338   0.062   3.349  0.00  0.00           H+0
HETATM   59  H   UNK     0      -2.322   1.270   2.436  0.00  0.00           H+0
HETATM   60  H   UNK     0      -1.590   0.420   3.802  0.00  0.00           H+0
CONECT    1    2   27   28   29                                             
CONECT    2    1    3                                                       
CONECT    3    2    4   23   30                                             
CONECT    4    3    5   31   32                                             
CONECT    5    4    6    7   22                                             
CONECT    6    5   33   34   35                                             
CONECT    7    5    8   36   37                                             
CONECT    8    7    9   38   39                                             
CONECT    9    8   10   11   15                                             
CONECT   10    9   40   41   42                                             
CONECT   11    9   12   22   43                                             
CONECT   12   11   13   44   45                                             
CONECT   13   12   14   19   46                                             
CONECT   14   13   15                                                       
CONECT   15   14   16   17    9                                             
CONECT   16   15   47                                                       
CONECT   17   15   18   19   48                                             
CONECT   18   17   49                                                       
CONECT   19   17   20   13   50                                             
CONECT   20   19   21   51   52                                             
CONECT   21   20   53                                                       
CONECT   22   11   23    5                                                  
CONECT   23   22   24    3                                                  
CONECT   24   23   25   26   54                                             
CONECT   25   24   55   56   57                                             
CONECT   26   24   58   59   60                                             
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    1                                                            
CONECT   30    3                                                            
CONECT   31    4                                                            
CONECT   32    4                                                            
CONECT   33    6                                                            
CONECT   34    6                                                            
CONECT   35    6                                                            
CONECT   36    7                                                            
CONECT   37    7                                                            
CONECT   38    8                                                            
CONECT   39    8                                                            
CONECT   40   10                                                            
CONECT   41   10                                                            
CONECT   42   10                                                            
CONECT   43   11                                                            
CONECT   44   12                                                            
CONECT   45   12                                                            
CONECT   46   13                                                            
CONECT   47   16                                                            
CONECT   48   17                                                            
CONECT   49   18                                                            
CONECT   50   19                                                            
CONECT   51   20                                                            
CONECT   52   20                                                            
CONECT   53   21                                                            
CONECT   54   24                                                            
CONECT   55   25                                                            
CONECT   56   25                                                            
CONECT   57   25                                                            
CONECT   58   26                                                            
CONECT   59   26                                                            
CONECT   60   26                                                            
MASTER        0    0    0    0    0    0    0    0   60    0  126    0
END

RDKit          3D

60 63  0  0  0  0  0  0  0  0999 V2000
   -4.6737    1.4846    0.7594 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3995    1.4184    0.2580 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0197    0.1082   -0.0307 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.6732   -0.0537   -1.4859 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2278    0.4293   -1.4530 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1784    1.9338   -1.5078 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5270   -0.1782   -2.6096 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9463   -0.2950   -2.4933 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3252   -0.9951   -1.2160 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9327   -2.4328   -1.3009 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7329   -0.2628   -0.0546 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3325   -0.6536    1.2505 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8334   -0.7107    1.1454 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1116   -1.6620    0.1298 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8365   -0.9562   -1.0401 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4072   -1.5901   -2.1173 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3692    0.4416   -0.8180 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.6110    0.4651   -1.5034 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5466    0.4698    0.6601 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3048    1.7724    1.3336 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6598    1.6904    2.7036 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7123   -0.0891   -0.1406 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7555   -0.2620    0.6619 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7764   -0.7550    2.0585 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8679   -1.8619    2.0513 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3414    0.3097    2.9909 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4276    1.0788    0.0349 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9281    2.5805    0.8543 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8257    1.0612    1.7614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8658   -0.5600    0.2641 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7598   -1.0964   -1.8198 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2726    0.6178   -2.1189 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0793    2.3700   -2.0118 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2306    2.3071   -1.9441 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2131    2.3111   -0.4610 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0194   -1.1434   -2.9271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7256    0.4975   -3.4961 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3796    0.7173   -2.5996 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3085   -0.8685   -3.3878 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6163   -2.9397   -2.0179 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0883   -2.8785   -0.2816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0902   -2.6052   -1.6533 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1283    0.8053   -0.2023 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9921    0.0299    2.0375 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0656   -1.6902    1.5684 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2301   -1.1679    2.0841 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4027   -1.0047   -2.9070 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7831    1.2428   -1.2523 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7685    1.3420   -1.9273 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6552    0.2503    0.8306 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9554    2.5823    0.9336 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2893    2.1581    1.3339 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5616    2.0411    2.8675 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9258   -1.2602    2.4479 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8041   -2.4041    1.1005 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8720   -1.3617    2.1422 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7319   -2.5291    2.9279 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3383    0.0617    3.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3220    1.2695    2.4359 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5899    0.4201    3.8022 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  1
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  6
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  6
 15 17  1  0
 17 18  1  0
 17 19  1  0
 19 20  1  0
 20 21  1  0
 11 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
 23  3  1  0
 22  5  1  0
 15  9  1  0
 19 13  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  3 30  1  1
  4 31  1  0
  4 32  1  0
  6 33  1  0
  6 34  1  0
  6 35  1  0
  7 36  1  0
  7 37  1  0
  8 38  1  0
  8 39  1  0
 10 40  1  0
 10 41  1  0
 10 42  1  0
 11 43  1  6
 12 44  1  0
 12 45  1  0
 13 46  1  1
 16 47  1  0
 17 48  1  6
 18 49  1  0
 19 50  1  6
 20 51  1  0
 20 52  1  0
 21 53  1  0
 24 54  1  1
 25 55  1  0
 25 56  1  0
 25 57  1  0
 26 58  1  0
 26 59  1  0
 26 60  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₁H₃₄O₅

Average Mass

366.4980 Da

Monoisotopic Mass

366.24062 Da

IUPAC Name

(1S,2R,5S,7S,10R,12R,13R,14R)-13-(hydroxymethyl)-7-methoxy-2,5-dimethyl-8-(propan-2-yl)-15-oxatetracyclo[10.2.1.0^{2,10}.0^{5,9}]pentadec-8-ene-1,14-diol

Traditional Name

(1S,2R,5S,7S,10R,12R,13R,14R)-13-(hydroxymethyl)-8-isopropyl-7-methoxy-2,5-dimethyl-15-oxatetracyclo[10.2.1.0^{2,10}.0^{5,9}]pentadec-8-ene-1,14-diol

CAS Registry Number

Not Available

SMILES

CO[C@H]1C[C@]2(C)CC[C@]3(C)[C@H](C[C@H]4O[C@]3(O)[C@H](O)[C@H]4CO)C2=C1C(C)C

InChI Identifier

InChI=1S/C21H34O5/c1-11(2)16-15(25-5)9-19(3)6-7-20(4)13(17(16)19)8-14-12(10-22)18(23)21(20,24)26-14/h11-15,18,22-24H,6-10H2,1-5H3/t12-,13+,14+,15-,18+,19-,20+,21+/m0/s1

InChI Key

LNOVVADOOMBUOP-RPKDIVBTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cyathus africanus	NPAtlas	30831199

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.05	ALOGPS
logP	1.76	ChemAxon
logS	-2.9	ALOGPS
pKa (Strongest Acidic)	10.77	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	79.15 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	98.54 m³·mol⁻¹	ChemAxon
Polarizability	40.73 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA026935

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

146683342

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Yin X, Wei J, Wang WW, Gao YQ, Stadler M, Kou RW, Gao JM: New cyathane diterpenoids with neurotrophic and anti-neuroinflammatory activity from the bird's nest fungus Cyathus africanus. Fitoterapia. 2019 Apr;134:201-209. doi: 10.1016/j.fitote.2019.02.013. Epub 2019 Mar 2. [PubMed:30831199 ]

Showing NP-Card for Cyafricanin B (NP0019331)

MOL for NP0019331 (Cyafricanin B)

3D MOL for NP0019331 (Cyafricanin B)

3D SDF for NP0019331 (Cyafricanin B)

3D-SDF for NP0019331 (Cyafricanin B)

PDB for NP0019331 (Cyafricanin B)

3D PDB for NP0019331 (Cyafricanin B)

SMILES for NP0019331 (Cyafricanin B)

INCHI for NP0019331 (Cyafricanin B)

Structure for NP0019331 (Cyafricanin B)

3D Structure for NP0019331 (Cyafricanin B)