NP-MRD: Showing NP-Card for Clapone (NP0019021)

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Record Information

Version

2.0

Created at

2021-01-06 04:34:43 UTC

Updated at

2021-07-15 17:29:49 UTC

NP-MRD ID

NP0019021

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Clapone

Provided By

NPAtlas

Description

Clapone is found in Cladosporium. Clapone was first documented in 2018 (PMID: 30577517). Based on a literature review very few articles have been published on Clapone.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242104403D          

 28 29  0  0  0  0            999 V2000
    5.1204    0.3955   -0.4124 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6617    0.3250   -0.1564 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7614    0.1946   -1.1035 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3199    0.1259   -0.8396 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4118   -0.0115   -1.8701 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9241   -0.0745   -1.6148 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8055   -0.1979   -2.4880 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3378    0.0047   -0.2811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6735   -0.0539    0.0291 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7047   -0.2011   -1.0289 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0228    0.0295    1.3673 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0665    0.1649    2.3340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4168    0.2488    3.6787 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7416    0.2230    2.0264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3571    0.1410    0.6779 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9319    0.1997    0.4073 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5757    0.9870    0.4033 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3471    0.9131   -1.3764 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5706   -0.6239   -0.3674 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2989    0.3825    0.8614 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0842    0.1344   -2.1242 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7470   -0.0709   -2.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7877    0.6800   -1.6976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6761   -1.1725   -1.5528 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7031   -0.2134   -0.4908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0576   -0.0153    1.6150 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6035    1.1325    4.1254 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0477    0.3303    2.7675 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16  4  1  0  0  0  0
 15  8  1  0  0  0  0
  1 17  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
  2 20  1  0  0  0  0
  3 21  1  0  0  0  0
  5 22  1  0  0  0  0
 10 23  1  0  0  0  0
 10 24  1  0  0  0  0
 10 25  1  0  0  0  0
 11 26  1  0  0  0  0
 13 27  1  0  0  0  0
 14 28  1  0  0  0  0
M  END


  Mrv1652306242104403D          

 28 29  0  0  0  0            999 V2000
    5.1204    0.3955   -0.4124 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6617    0.3250   -0.1564 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7614    0.1946   -1.1035 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3199    0.1259   -0.8396 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4118   -0.0115   -1.8701 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9241   -0.0745   -1.6148 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8055   -0.1979   -2.4880 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3378    0.0047   -0.2811 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6735   -0.0539    0.0291 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7047   -0.2011   -1.0289 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0228    0.0295    1.3673 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0665    0.1649    2.3340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4168    0.2488    3.6787 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7416    0.2230    2.0264 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3571    0.1410    0.6779 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9319    0.1997    0.4073 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.5757    0.9870    0.4033 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3471    0.9131   -1.3764 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5706   -0.6239   -0.3674 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2989    0.3825    0.8614 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0842    0.1344   -2.1242 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7470   -0.0709   -2.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7877    0.6800   -1.6976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6761   -1.1725   -1.5528 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7031   -0.2134   -0.4908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0576   -0.0153    1.6150 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6035    1.1325    4.1254 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0477    0.3303    2.7675 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16  4  1  0  0  0  0
 15  8  1  0  0  0  0
  1 17  1  0  0  0  0
  1 18  1  0  0  0  0
  1 19  1  0  0  0  0
  2 20  1  0  0  0  0
  3 21  1  0  0  0  0
  5 22  1  0  0  0  0
 10 23  1  0  0  0  0
 10 24  1  0  0  0  0
 10 25  1  0  0  0  0
 11 26  1  0  0  0  0
 13 27  1  0  0  0  0
 14 28  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0019021

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C([H])C(=C2C(=O)C([H])=C(OC2=C1[H])C(\[H])=C(/[H])C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C13H12O3/c1-3-4-10-7-11(15)13-8(2)5-9(14)6-12(13)16-10/h3-7,14H,1-2H3/b4-3+

> <INCHI_KEY>
NQIKHLHKSAOUOA-ONEGZZNKSA-N

> <FORMULA>
C13H12O3

> <MOLECULAR_WEIGHT>
216.236

> <EXACT_MASS>
216.078644246

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
28

> <JCHEM_AVERAGE_POLARIZABILITY>
23.36458052730211

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
7-hydroxy-5-methyl-2-[(1E)-prop-1-en-1-yl]-4H-chromen-4-one

> <ALOGPS_LOGP>
3.06

> <JCHEM_LOGP>
2.842486200333333

> <ALOGPS_LOGS>
-3.11

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
16.447396019351086

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.632390739703551

> <JCHEM_PKA_STRONGEST_BASIC>
-5.356442121940269

> <JCHEM_POLAR_SURFACE_AREA>
46.53

> <JCHEM_REFRACTIVITY>
64.2169

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.67e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
7-hydroxy-5-methyl-2-[(1E)-prop-1-en-1-yl]chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       5.120   0.396  -0.412  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.662   0.325  -0.156  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.761   0.195  -1.103  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.320   0.126  -0.840  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.412  -0.012  -1.870  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.924  -0.075  -1.615  0.00  0.00           C+0
HETATM    7  O   UNK     0      -1.806  -0.198  -2.488  0.00  0.00           O+0
HETATM    8  C   UNK     0      -1.338   0.005  -0.281  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.674  -0.054   0.029  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.705  -0.201  -1.029  0.00  0.00           C+0
HETATM   11  C   UNK     0      -3.023   0.030   1.367  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.067   0.165   2.334  0.00  0.00           C+0
HETATM   13  O   UNK     0      -2.417   0.249   3.679  0.00  0.00           O+0
HETATM   14  C   UNK     0      -0.742   0.223   2.026  0.00  0.00           C+0
HETATM   15  C   UNK     0      -0.357   0.141   0.678  0.00  0.00           C+0
HETATM   16  O   UNK     0       0.932   0.200   0.407  0.00  0.00           O+0
HETATM   17  H   UNK     0       5.576   0.987   0.403  0.00  0.00           H+0
HETATM   18  H   UNK     0       5.347   0.913  -1.376  0.00  0.00           H+0
HETATM   19  H   UNK     0       5.571  -0.624  -0.367  0.00  0.00           H+0
HETATM   20  H   UNK     0       3.299   0.383   0.861  0.00  0.00           H+0
HETATM   21  H   UNK     0       3.084   0.134  -2.124  0.00  0.00           H+0
HETATM   22  H   UNK     0       0.747  -0.071  -2.890  0.00  0.00           H+0
HETATM   23  H   UNK     0      -3.788   0.680  -1.698  0.00  0.00           H+0
HETATM   24  H   UNK     0      -3.676  -1.173  -1.553  0.00  0.00           H+0
HETATM   25  H   UNK     0      -4.703  -0.213  -0.491  0.00  0.00           H+0
HETATM   26  H   UNK     0      -4.058  -0.015   1.615  0.00  0.00           H+0
HETATM   27  H   UNK     0      -2.603   1.133   4.125  0.00  0.00           H+0
HETATM   28  H   UNK     0       0.048   0.330   2.768  0.00  0.00           H+0
CONECT    1    2   17   18   19                                             
CONECT    2    1    3   20                                                  
CONECT    3    2    4   21                                                  
CONECT    4    3    5   16                                                  
CONECT    5    4    6   22                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   15                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9   23   24   25                                             
CONECT   11    9   12   26                                                  
CONECT   12   11   13   14                                                  
CONECT   13   12   27                                                       
CONECT   14   12   15   28                                                  
CONECT   15   14   16    8                                                  
CONECT   16   15    4                                                       
CONECT   17    1                                                            
CONECT   18    1                                                            
CONECT   19    1                                                            
CONECT   20    2                                                            
CONECT   21    3                                                            
CONECT   22    5                                                            
CONECT   23   10                                                            
CONECT   24   10                                                            
CONECT   25   10                                                            
CONECT   26   11                                                            
CONECT   27   13                                                            
CONECT   28   14                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   58    0
END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₁₃H₁₂O₃

Average Mass

216.2360 Da

Monoisotopic Mass

216.07864 Da

IUPAC Name

7-hydroxy-5-methyl-2-[(1E)-prop-1-en-1-yl]-4H-chromen-4-one

Traditional Name

7-hydroxy-5-methyl-2-[(1E)-prop-1-en-1-yl]chromen-4-one

CAS Registry Number

Not Available

SMILES

C\C=C\C1=CC(=O)C2=C(O1)C=C(O)C=C2C

InChI Identifier

InChI=1S/C13H12O3/c1-3-4-10-7-11(15)13-8(2)5-9(14)6-12(13)16-10/h3-7,14H,1-2H3/b4-3+

InChI Key

NQIKHLHKSAOUOA-ONEGZZNKSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cladosporium	NPAtlas	30577517

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.06	ALOGPS
logP	2.84	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	6.63	ChemAxon
pKa (Strongest Basic)	-5.4	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	46.53 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	64.22 m³·mol⁻¹	ChemAxon
Polarizability	23.36 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA026443

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

71116043

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

146682882

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Wang P, Cui Y, Cai C, Chen H, Dai Y, Chen P, Kong F, Yuan J, Song X, Mei W, Dai H: Two New Succinimide Derivatives Cladosporitins A and B from the Mangrove-derived Fungus Cladosporium sp. HNWSW-1. Mar Drugs. 2018 Dec 20;17(1). pii: md17010004. doi: 10.3390/md17010004. [PubMed:30577517 ]

Showing NP-Card for Clapone (NP0019021)

MOL for NP0019021 (Clapone)

3D MOL for NP0019021 (Clapone)

3D SDF for NP0019021 (Clapone)

3D-SDF for NP0019021 (Clapone)

PDB for NP0019021 (Clapone)

3D PDB for NP0019021 (Clapone)

SMILES for NP0019021 (Clapone)

INCHI for NP0019021 (Clapone)

Structure for NP0019021 (Clapone)

3D Structure for NP0019021 (Clapone)