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Record Information
Version1.0
Created at2021-01-06 02:35:18 UTC
Updated at2021-07-15 17:26:54 UTC
NP-MRD IDNP0017953
Secondary Accession NumbersNone
Natural Product Identification
Common NameSpiroxanthoquinodin A
Provided ByNPAtlasNPAtlas Logo
DescriptionSpiroxanthoquinodin A belongs to the class of organic compounds known as chromones. Chromones are compounds containing a benzopyran-4-one moiety. Spiroxanthoquinodin A is found in Cytospora and Cytospora eugeniae. It was first documented in 2018 (PMID: 29677644). Based on a literature review very few articles have been published on Spiroxanthoquinodin A.
Structure
Data?1624506544
Synonyms
ValueSource
6',15'-Dimethyl (1S,2S,3R,6'r,15's)-1,2',3,5-tetrahydroxy-7-methyl-4,4'-dioxo-6'-[(2S)-5-oxooxolan-2-yl]-3,4-dihydro-1H-7'-oxaspiro[naphthalene-2,12'-tricyclo[8.5.0.0,]pentadecane]-1',3'(8'),9',13'-tetraene-6',15'-dicarboxylic acidGenerator
Chemical FormulaC32H30O13
Average Mass622.5790 Da
Monoisotopic Mass622.16864 Da
IUPAC Name6',15'-dimethyl (1S,2S,3R,6'R,15'S)-1,2',3,5-tetrahydroxy-7-methyl-4,4'-dioxo-6'-[(2S)-5-oxooxolan-2-yl]-3,4-dihydro-1H-7'-oxaspiro[naphthalene-2,12'-tricyclo[8.5.0.0^{3,8}]pentadecane]-1',3'(8'),9',13'-tetraene-6',15'-dicarboxylate
Traditional Name6',15'-dimethyl (1S,2S,3R,6'R,15'S)-1,2',3,5-tetrahydroxy-7-methyl-4,4'-dioxo-6'-[(2S)-5-oxooxolan-2-yl]-1,3-dihydro-7'-oxaspiro[naphthalene-2,12'-tricyclo[8.5.0.0^{3,8}]pentadecane]-1',3'(8'),9',13'-tetraene-6',15'-dicarboxylate
CAS Registry NumberNot Available
SMILES
COC(=O)[C@H]1C=C[C@]2(CC3=CC4=C(C(=O)C[C@@](O4)([C@@H]4CCC(=O)O4)C(=O)OC)C(O)=C13)[C@@H](O)C(=O)C1=C(O)C=C(C)C=C1[C@@H]2O
InChI Identifier
InChI=1S/C32H30O13/c1-13-8-16-23(17(33)9-13)26(37)28(39)31(27(16)38)7-6-15(29(40)42-2)22-14(11-31)10-19-24(25(22)36)18(34)12-32(45-19,30(41)43-3)20-4-5-21(35)44-20/h6-10,15,20,27-28,33,36,38-39H,4-5,11-12H2,1-3H3/t15-,20-,27-,28-,31+,32+/m0/s1
InChI KeyUZLHOYMSNLJUDW-ROCUUYBPSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
CytosporaNPAtlas
Cytospora eugeniaeLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as chromones. Chromones are compounds containing a benzopyran-4-one moiety.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzopyrans
Sub Class1-benzopyrans
Direct ParentChromones
Alternative Parents
Substituents
  • Chromone
  • Tetralin
  • Tricarboxylic acid or derivatives
  • Aryl alkyl ketone
  • Aryl ketone
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Benzenoid
  • Gamma butyrolactone
  • Vinylogous acid
  • Methyl ester
  • Tetrahydrofuran
  • Secondary alcohol
  • Lactone
  • Ketone
  • Carboxylic acid ester
  • Oxacycle
  • Polyol
  • Ether
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.87ALOGPS
logP2.65ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)8.07ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count4ChemAxon
Polar Surface Area203.19 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity153.29 m³·mol⁻¹ChemAxon
Polarizability60.81 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA023710
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78442181
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139590963
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Sadorn K, Saepua S, Boonyuen N, Boonruangprapa T, Rachtawee P, Pittayakhajonwut P: Antimicrobial activity and cytotoxicity of xanthoquinodin analogs from the fungus Cytospora eugeniae BCC42696. Phytochemistry. 2018 Jul;151:99-109. doi: 10.1016/j.phytochem.2018.04.001. Epub 2018 Apr 24. [PubMed:29677644 ]