NP-MRD: Showing NP-Card for Borrelidin F (NP0017652)

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Record Information

Version

2.0

Created at

2021-01-06 02:19:01 UTC

Updated at

2026-02-25 21:56:59 UTC

NP-MRD ID

NP0017652

Natural Product DOI

https://doi.org/10.57994/0504

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Borrelidin F

Provided By

NPAtlas

Description

Borrelidin F is found in Streptomyces. Borrelidin F was first documented in 2018 (PMID: 29452840).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307042107273D          

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M  END

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   -3.6432   -0.3463    2.1319 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
 12 21  1  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  3  0
 25 28  1  0
 28 29  1  0
 28 30  1  0
 30 31  1  0
 30 32  1  0
 32 33  1  0
 33 34  1  0
 33 35  1  0
 35  2  1  0
 17 13  1  0
  1 36  1  0
  1 37  1  0
  1 38  1  0
  2 39  1  6
  3 40  1  0
  3 41  1  0
  4 42  1  6
  5 43  1  0
  5 44  1  0
  5 45  1  0
  6 46  1  6
  7 47  1  0
  8 48  1  0
  8 49  1  0
 12 50  1  6
 13 51  1  6
 14 52  1  0
 14 53  1  0
 15 54  1  0
 15 55  1  0
 16 56  1  0
 16 57  1  0
 17 58  1  1
 20 59  1  0
 21 60  1  0
 21 61  1  0
 22 62  1  0
 23 63  1  0
 24 64  1  0
 28 65  1  6
 29 66  1  0
 30 67  1  1
 31 68  1  0
 31 69  1  0
 31 70  1  0
 32 71  1  0
 32 72  1  0
 33 73  1  6
 34 74  1  0
 34 75  1  0
 34 76  1  0
 35 77  1  0
 35 78  1  0
M  END


  Mrv1652307042107273D          

 78 79  0  0  0  0            999 V2000
   -3.5712   -2.8526    2.1182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6758   -2.0303    0.8581 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2991   -2.6797   -0.3771 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.0209   -3.3851   -0.5769 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7850   -4.5778    0.3104 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8044   -2.5679   -0.8623 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2696   -1.4008   -1.5185 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0737   -2.2245    0.2632 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.5162   -2.4753   -0.0505 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7538   -3.6925   -0.3777 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5203   -1.5807   -0.0172 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7866   -0.4028   -0.6730 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1174    0.2097   -0.2540 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2570   -0.7248   -0.6462 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.4184   -0.0956    0.0940 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.8160    0.5143    1.3417 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2980    0.2829    1.2225 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5665    1.3842    1.8707 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6541    1.1955    2.7154 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8824    2.6960    1.5502 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7324    0.6693   -0.6199 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2519    1.8858   -1.3060 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9445    3.1247   -0.9846 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0628    3.5426    0.0646 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2471    3.5235   -0.0142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9999    3.9801    1.1535 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6090    4.3588    2.0721 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0695    3.1360   -1.1756 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4236    2.4483   -2.1670 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3321    2.4393   -0.8030 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9539    1.9121   -2.1018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2387    1.3951    0.2417 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4009    0.3911    0.1579 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6439    1.1749    0.6001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1204   -0.6716    1.1775 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.1813   -2.2880    2.8880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0571   -3.8393    2.0495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5539   -2.8709    2.5495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7942   -1.8214    0.7852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3996   -1.9509   -1.2235 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1234   -3.4299   -0.6262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1838   -3.8940   -1.5953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1689   -5.3679   -0.2205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2587   -4.3965    1.2403 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7827   -5.0721    0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1460   -3.0409   -1.6556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4290   -1.5792   -2.4794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1929   -2.6718    1.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0227   -1.1298    0.4419 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9447   -0.5802   -1.7944 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2752    1.1677   -0.7170 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0550   -1.7586   -0.3028 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3696   -0.6477   -1.7416 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2031   -0.8518    0.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8279    0.6911   -0.5749 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2114    0.0801    2.2613 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9387    1.6273    1.3043 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1247   -0.6932    1.7299 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5486    3.1951    2.1010 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3144    0.8758    0.3607 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8870    0.2781   -1.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9270    1.7045   -2.1335 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4811    3.8982   -1.5837 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5187    3.9577    1.0097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4317    4.1000   -1.7049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1792    2.9814   -2.9614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0753    3.2095   -0.4407 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7498    2.7063   -2.8662 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3896    1.0175   -2.4059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0364    1.7534   -1.9873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2557    1.7623    1.2728 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3064    0.8234    0.0946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5214    0.0265   -0.8771 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4674    1.0758   -0.1260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4419    2.2505    0.7300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    0.8047    1.5882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0661   -0.6585    1.4293 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6432   -0.3463    2.1319 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 18 20  1  0  0  0  0
 12 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  3  0  0  0  0
 25 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 30 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 33 35  1  0  0  0  0
 35  2  1  0  0  0  0
 17 13  1  0  0  0  0
  1 36  1  0  0  0  0
  1 37  1  0  0  0  0
  1 38  1  0  0  0  0
  2 39  1  6  0  0  0
  3 40  1  0  0  0  0
  3 41  1  0  0  0  0
  4 42  1  6  0  0  0
  5 43  1  0  0  0  0
  5 44  1  0  0  0  0
  5 45  1  0  0  0  0
  6 46  1  6  0  0  0
  7 47  1  0  0  0  0
  8 48  1  0  0  0  0
  8 49  1  0  0  0  0
 12 50  1  6  0  0  0
 13 51  1  6  0  0  0
 14 52  1  0  0  0  0
 14 53  1  0  0  0  0
 15 54  1  0  0  0  0
 15 55  1  0  0  0  0
 16 56  1  0  0  0  0
 16 57  1  0  0  0  0
 17 58  1  1  0  0  0
 20 59  1  0  0  0  0
 21 60  1  0  0  0  0
 21 61  1  0  0  0  0
 22 62  1  0  0  0  0
 23 63  1  0  0  0  0
 24 64  1  0  0  0  0
 28 65  1  6  0  0  0
 29 66  1  0  0  0  0
 30 67  1  1  0  0  0
 31 68  1  0  0  0  0
 31 69  1  0  0  0  0
 31 70  1  0  0  0  0
 32 71  1  0  0  0  0
 32 72  1  0  0  0  0
 33 73  1  6  0  0  0
 34 74  1  0  0  0  0
 34 75  1  0  0  0  0
 34 76  1  0  0  0  0
 35 77  1  0  0  0  0
 35 78  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0017652

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)[C@]1([H])C([H])([H])C([H])([H])C([H])([H])[C@@]1([H])[C@@]1([H])OC(=O)C([H])([H])[C@]([H])(O[H])[C@@]([H])(C([H])([H])[H])C([H])([H])[C@@]([H])(C([H])([H])[H])C([H])([H])[C@@]([H])(C([H])([H])[H])C([H])([H])[C@]([H])(C([H])([H])[H])[C@]([H])(O[H])\C(C#N)=C(\[H])/C(/[H])=C([H])\C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C28H43NO6/c1-17-12-18(2)14-20(4)27(32)21(16-29)8-5-6-11-25(22-9-7-10-23(22)28(33)34)35-26(31)15-24(30)19(3)13-17/h5-6,8,17-20,22-25,27,30,32H,7,9-15H2,1-4H3,(H,33,34)/b6-5-,21-8-/t17-,18+,19-,20-,22+,23+,24-,25-,27-/m0/s1

> <INCHI_KEY>
OJCKRNPLOZHAOU-DIMQYJMHSA-N

> <FORMULA>
C28H43NO6

> <MOLECULAR_WEIGHT>
489.653

> <EXACT_MASS>
489.309038109

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
78

> <JCHEM_AVERAGE_POLARIZABILITY>
53.909808768749635

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2R)-2-[(2S,4Z,6Z,8S,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxo-1-oxacyclooctadeca-4,6-dien-2-yl]cyclopentane-1-carboxylic acid

> <ALOGPS_LOGP>
3.79

> <JCHEM_LOGP>
4.659357939333334

> <ALOGPS_LOGS>
-4.72

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
13.698482800037006

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.8741594427926027

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9329410031715684

> <JCHEM_POLAR_SURFACE_AREA>
127.85000000000001

> <JCHEM_REFRACTIVITY>
135.45829999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
9.39e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R)-2-[(2S,4Z,6Z,8S,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxo-1-oxacyclooctadeca-4,6-dien-2-yl]cyclopentane-1-carboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 78 79  0  0  0  0  0  0  0  0999 V2000
   -3.5712   -2.8526    2.1182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6758   -2.0303    0.8581 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2991   -2.6797   -0.3771 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0209   -3.3851   -0.5769 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7850   -4.5778    0.3104 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8044   -2.5679   -0.8623 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2696   -1.4008   -1.5185 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0737   -2.2245    0.2632 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5162   -2.4753   -0.0505 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7538   -3.6925   -0.3777 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5203   -1.5807   -0.0172 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7866   -0.4028   -0.6730 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1174    0.2097   -0.2540 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2570   -0.7248   -0.6462 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4184   -0.0956    0.0940 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8160    0.5143    1.3417 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2980    0.2829    1.2225 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5665    1.3842    1.8707 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6541    1.1955    2.7154 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8824    2.6960    1.5502 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7324    0.6693   -0.6199 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2519    1.8858   -1.3060 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9445    3.1247   -0.9846 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0628    3.5426    0.0646 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2471    3.5235   -0.0142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9999    3.9801    1.1535 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6090    4.3588    2.0721 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0695    3.1360   -1.1756 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4236    2.4483   -2.1670 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3321    2.4393   -0.8030 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9539    1.9121   -2.1018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2387    1.3951    0.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4009    0.3911    0.1579 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6439    1.1749    0.6001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1204   -0.6716    1.1775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1813   -2.2880    2.8880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0571   -3.8393    2.0495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5539   -2.8709    2.5495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7942   -1.8214    0.7852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3996   -1.9509   -1.2235 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1234   -3.4299   -0.6262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1838   -3.8940   -1.5953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1689   -5.3679   -0.2205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2587   -4.3965    1.2403 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7827   -5.0721    0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1460   -3.0409   -1.6556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4290   -1.5792   -2.4794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1929   -2.6718    1.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0227   -1.1298    0.4419 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9447   -0.5802   -1.7944 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2752    1.1677   -0.7170 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0550   -1.7586   -0.3028 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3696   -0.6477   -1.7416 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2031   -0.8518    0.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8279    0.6911   -0.5749 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2114    0.0801    2.2613 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9387    1.6273    1.3043 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1247   -0.6932    1.7299 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5486    3.1951    2.1010 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3144    0.8758    0.3607 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8870    0.2781   -1.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9270    1.7045   -2.1335 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4811    3.8982   -1.5837 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5187    3.9577    1.0097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4317    4.1000   -1.7049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1792    2.9814   -2.9614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0753    3.2095   -0.4407 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7498    2.7063   -2.8662 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3896    1.0175   -2.4059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0364    1.7534   -1.9873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2557    1.7623    1.2728 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3064    0.8234    0.0946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5214    0.0265   -0.8771 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4674    1.0758   -0.1260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4419    2.2505    0.7300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    0.8047    1.5882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0661   -0.6585    1.4293 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6432   -0.3463    2.1319 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  2  0
 18 20  1  0
 12 21  1  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  3  0
 25 28  1  0
 28 29  1  0
 28 30  1  0
 30 31  1  0
 30 32  1  0
 32 33  1  0
 33 34  1  0
 33 35  1  0
 35  2  1  0
 17 13  1  0
  1 36  1  0
  1 37  1  0
  1 38  1  0
  2 39  1  6
  3 40  1  0
  3 41  1  0
  4 42  1  6
  5 43  1  0
  5 44  1  0
  5 45  1  0
  6 46  1  6
  7 47  1  0
  8 48  1  0
  8 49  1  0
 12 50  1  6
 13 51  1  6
 14 52  1  0
 14 53  1  0
 15 54  1  0
 15 55  1  0
 16 56  1  0
 16 57  1  0
 17 58  1  1
 20 59  1  0
 21 60  1  0
 21 61  1  0
 22 62  1  0
 23 63  1  0
 24 64  1  0
 28 65  1  6
 29 66  1  0
 30 67  1  1
 31 68  1  0
 31 69  1  0
 31 70  1  0
 32 71  1  0
 32 72  1  0
 33 73  1  6
 34 74  1  0
 34 75  1  0
 34 76  1  0
 35 77  1  0
 35 78  1  0
M  END

HEADER    PROTEIN                                 04-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-JUL-21         0                                  
HETATM    1  C   UNK     0      -3.571  -2.853   2.118  0.00  0.00           C+0
HETATM    2  C   UNK     0      -3.676  -2.030   0.858  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.299  -2.680  -0.377  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.021  -3.385  -0.577  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.785  -4.578   0.310  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.804  -2.568  -0.862  0.00  0.00           C+0
HETATM    7  O   UNK     0      -1.270  -1.401  -1.519  0.00  0.00           O+0
HETATM    8  C   UNK     0       0.074  -2.224   0.263  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.516  -2.475  -0.051  0.00  0.00           C+0
HETATM   10  O   UNK     0       1.754  -3.692  -0.378  0.00  0.00           O+0
HETATM   11  O   UNK     0       2.520  -1.581  -0.017  0.00  0.00           O+0
HETATM   12  C   UNK     0       2.787  -0.403  -0.673  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.117   0.210  -0.254  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.257  -0.725  -0.646  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.418  -0.096   0.094  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.816   0.514   1.342  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.298   0.283   1.222  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.567   1.384   1.871  0.00  0.00           C+0
HETATM   19  O   UNK     0       2.654   1.196   2.715  0.00  0.00           O+0
HETATM   20  O   UNK     0       3.882   2.696   1.550  0.00  0.00           O+0
HETATM   21  C   UNK     0       1.732   0.669  -0.620  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.252   1.886  -1.306  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.944   3.125  -0.985  0.00  0.00           C+0
HETATM   24  C   UNK     0       1.063   3.543   0.065  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.247   3.523  -0.014  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.000   3.980   1.153  0.00  0.00           C+0
HETATM   27  N   UNK     0      -1.609   4.359   2.072  0.00  0.00           N+0
HETATM   28  C   UNK     0      -1.069   3.136  -1.176  0.00  0.00           C+0
HETATM   29  O   UNK     0      -0.424   2.448  -2.167  0.00  0.00           O+0
HETATM   30  C   UNK     0      -2.332   2.439  -0.803  0.00  0.00           C+0
HETATM   31  C   UNK     0      -2.954   1.912  -2.102  0.00  0.00           C+0
HETATM   32  C   UNK     0      -2.239   1.395   0.242  0.00  0.00           C+0
HETATM   33  C   UNK     0      -3.401   0.391   0.158  0.00  0.00           C+0
HETATM   34  C   UNK     0      -4.644   1.175   0.600  0.00  0.00           C+0
HETATM   35  C   UNK     0      -3.120  -0.672   1.178  0.00  0.00           C+0
HETATM   36  H   UNK     0      -4.181  -2.288   2.888  0.00  0.00           H+0
HETATM   37  H   UNK     0      -4.057  -3.839   2.050  0.00  0.00           H+0
HETATM   38  H   UNK     0      -2.554  -2.871   2.550  0.00  0.00           H+0
HETATM   39  H   UNK     0      -4.794  -1.821   0.785  0.00  0.00           H+0
HETATM   40  H   UNK     0      -3.400  -1.951  -1.224  0.00  0.00           H+0
HETATM   41  H   UNK     0      -4.123  -3.430  -0.626  0.00  0.00           H+0
HETATM   42  H   UNK     0      -2.184  -3.894  -1.595  0.00  0.00           H+0
HETATM   43  H   UNK     0      -1.169  -5.368  -0.221  0.00  0.00           H+0
HETATM   44  H   UNK     0      -1.259  -4.396   1.240  0.00  0.00           H+0
HETATM   45  H   UNK     0      -2.783  -5.072   0.436  0.00  0.00           H+0
HETATM   46  H   UNK     0      -0.146  -3.041  -1.656  0.00  0.00           H+0
HETATM   47  H   UNK     0      -1.429  -1.579  -2.479  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.193  -2.672   1.239  0.00  0.00           H+0
HETATM   49  H   UNK     0       0.023  -1.130   0.442  0.00  0.00           H+0
HETATM   50  H   UNK     0       2.945  -0.580  -1.794  0.00  0.00           H+0
HETATM   51  H   UNK     0       4.275   1.168  -0.717  0.00  0.00           H+0
HETATM   52  H   UNK     0       5.055  -1.759  -0.303  0.00  0.00           H+0
HETATM   53  H   UNK     0       5.370  -0.648  -1.742  0.00  0.00           H+0
HETATM   54  H   UNK     0       7.203  -0.852   0.344  0.00  0.00           H+0
HETATM   55  H   UNK     0       6.828   0.691  -0.575  0.00  0.00           H+0
HETATM   56  H   UNK     0       6.211   0.080   2.261  0.00  0.00           H+0
HETATM   57  H   UNK     0       5.939   1.627   1.304  0.00  0.00           H+0
HETATM   58  H   UNK     0       4.125  -0.693   1.730  0.00  0.00           H+0
HETATM   59  H   UNK     0       4.549   3.195   2.101  0.00  0.00           H+0
HETATM   60  H   UNK     0       1.314   0.876   0.361  0.00  0.00           H+0
HETATM   61  H   UNK     0       0.887   0.278  -1.256  0.00  0.00           H+0
HETATM   62  H   UNK     0       2.927   1.704  -2.134  0.00  0.00           H+0
HETATM   63  H   UNK     0       2.481   3.898  -1.584  0.00  0.00           H+0
HETATM   64  H   UNK     0       1.519   3.958   1.010  0.00  0.00           H+0
HETATM   65  H   UNK     0      -1.432   4.100  -1.705  0.00  0.00           H+0
HETATM   66  H   UNK     0      -0.179   2.981  -2.961  0.00  0.00           H+0
HETATM   67  H   UNK     0      -3.075   3.209  -0.441  0.00  0.00           H+0
HETATM   68  H   UNK     0      -2.750   2.706  -2.866  0.00  0.00           H+0
HETATM   69  H   UNK     0      -2.390   1.018  -2.406  0.00  0.00           H+0
HETATM   70  H   UNK     0      -4.036   1.753  -1.987  0.00  0.00           H+0
HETATM   71  H   UNK     0      -2.256   1.762   1.273  0.00  0.00           H+0
HETATM   72  H   UNK     0      -1.306   0.823   0.095  0.00  0.00           H+0
HETATM   73  H   UNK     0      -3.521   0.027  -0.877  0.00  0.00           H+0
HETATM   74  H   UNK     0      -5.467   1.076  -0.126  0.00  0.00           H+0
HETATM   75  H   UNK     0      -4.442   2.251   0.730  0.00  0.00           H+0
HETATM   76  H   UNK     0      -5.001   0.805   1.588  0.00  0.00           H+0
HETATM   77  H   UNK     0      -2.066  -0.659   1.429  0.00  0.00           H+0
HETATM   78  H   UNK     0      -3.643  -0.346   2.132  0.00  0.00           H+0
CONECT    1    2   36   37   38                                             
CONECT    2    1    3   35   39                                             
CONECT    3    2    4   40   41                                             
CONECT    4    3    5    6   42                                             
CONECT    5    4   43   44   45                                             
CONECT    6    4    7    8   46                                             
CONECT    7    6   47                                                       
CONECT    8    6    9   48   49                                             
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13   21   50                                             
CONECT   13   12   14   17   51                                             
CONECT   14   13   15   52   53                                             
CONECT   15   14   16   54   55                                             
CONECT   16   15   17   56   57                                             
CONECT   17   16   18   13   58                                             
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   59                                                       
CONECT   21   12   22   60   61                                             
CONECT   22   21   23   62                                                  
CONECT   23   22   24   63                                                  
CONECT   24   23   25   64                                                  
CONECT   25   24   26   28                                                  
CONECT   26   25   27                                                       
CONECT   27   26                                                            
CONECT   28   25   29   30   65                                             
CONECT   29   28   66                                                       
CONECT   30   28   31   32   67                                             
CONECT   31   30   68   69   70                                             
CONECT   32   30   33   71   72                                             
CONECT   33   32   34   35   73                                             
CONECT   34   33   74   75   76                                             
CONECT   35   33    2   77   78                                             
CONECT   36    1                                                            
CONECT   37    1                                                            
CONECT   38    1                                                            
CONECT   39    2                                                            
CONECT   40    3                                                            
CONECT   41    3                                                            
CONECT   42    4                                                            
CONECT   43    5                                                            
CONECT   44    5                                                            
CONECT   45    5                                                            
CONECT   46    6                                                            
CONECT   47    7                                                            
CONECT   48    8                                                            
CONECT   49    8                                                            
CONECT   50   12                                                            
CONECT   51   13                                                            
CONECT   52   14                                                            
CONECT   53   14                                                            
CONECT   54   15                                                            
CONECT   55   15                                                            
CONECT   56   16                                                            
CONECT   57   16                                                            
CONECT   58   17                                                            
CONECT   59   20                                                            
CONECT   60   21                                                            
CONECT   61   21                                                            
CONECT   62   22                                                            
CONECT   63   23                                                            
CONECT   64   24                                                            
CONECT   65   28                                                            
CONECT   66   29                                                            
CONECT   67   30                                                            
CONECT   68   31                                                            
CONECT   69   31                                                            
CONECT   70   31                                                            
CONECT   71   32                                                            
CONECT   72   32                                                            
CONECT   73   33                                                            
CONECT   74   34                                                            
CONECT   75   34                                                            
CONECT   76   34                                                            
CONECT   77   35                                                            
CONECT   78   35                                                            
MASTER        0    0    0    0    0    0    0    0   78    0  158    0
END

RDKit          3D

78 79  0  0  0  0  0  0  0  0999 V2000
   -3.5712   -2.8526    2.1182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6758   -2.0303    0.8581 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2991   -2.6797   -0.3771 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0209   -3.3851   -0.5769 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7850   -4.5778    0.3104 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8044   -2.5679   -0.8623 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2696   -1.4008   -1.5185 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0737   -2.2245    0.2632 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5162   -2.4753   -0.0505 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7538   -3.6925   -0.3777 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5203   -1.5807   -0.0172 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7866   -0.4028   -0.6730 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1174    0.2097   -0.2540 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.2570   -0.7248   -0.6462 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4184   -0.0956    0.0940 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8160    0.5143    1.3417 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2980    0.2829    1.2225 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5665    1.3842    1.8707 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6541    1.1955    2.7154 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8824    2.6960    1.5502 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7324    0.6693   -0.6199 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2519    1.8858   -1.3060 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9445    3.1247   -0.9846 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0628    3.5426    0.0646 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2471    3.5235   -0.0142 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9999    3.9801    1.1535 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6090    4.3588    2.0721 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0695    3.1360   -1.1756 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4236    2.4483   -2.1670 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3321    2.4393   -0.8030 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9539    1.9121   -2.1018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2387    1.3951    0.2417 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4009    0.3911    0.1579 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6439    1.1749    0.6001 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1204   -0.6716    1.1775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1813   -2.2880    2.8880 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0571   -3.8393    2.0495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5539   -2.8709    2.5495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7942   -1.8214    0.7852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3996   -1.9509   -1.2235 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1234   -3.4299   -0.6262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1838   -3.8940   -1.5953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1689   -5.3679   -0.2205 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2587   -4.3965    1.2403 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7827   -5.0721    0.4356 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1460   -3.0409   -1.6556 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4290   -1.5792   -2.4794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1929   -2.6718    1.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0227   -1.1298    0.4419 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9447   -0.5802   -1.7944 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2752    1.1677   -0.7170 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0550   -1.7586   -0.3028 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3696   -0.6477   -1.7416 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2031   -0.8518    0.3444 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8279    0.6911   -0.5749 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2114    0.0801    2.2613 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9387    1.6273    1.3043 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1247   -0.6932    1.7299 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5486    3.1951    2.1010 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3144    0.8758    0.3607 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8870    0.2781   -1.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9270    1.7045   -2.1335 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4811    3.8982   -1.5837 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5187    3.9577    1.0097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4317    4.1000   -1.7049 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1792    2.9814   -2.9614 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0753    3.2095   -0.4407 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7498    2.7063   -2.8662 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3896    1.0175   -2.4059 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0364    1.7534   -1.9873 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2557    1.7623    1.2728 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3064    0.8234    0.0946 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5214    0.0265   -0.8771 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4674    1.0758   -0.1260 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4419    2.2505    0.7300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0013    0.8047    1.5882 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0661   -0.6585    1.4293 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6432   -0.3463    2.1319 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  6  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
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 33 35  1  0
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 17 13  1  0
  1 36  1  0
  1 37  1  0
  1 38  1  0
  2 39  1  6
  3 40  1  0
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  4 42  1  6
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  5 44  1  0
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  6 46  1  6
  7 47  1  0
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 34 75  1  0
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 35 77  1  0
 35 78  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₂₈H₄₃NO₆

Average Mass

489.6530 Da

Monoisotopic Mass

489.30904 Da

IUPAC Name

(1R,2R)-2-[(2S,4Z,6Z,8S,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxo-1-oxacyclooctadeca-4,6-dien-2-yl]cyclopentane-1-carboxylic acid

Traditional Name

(1R,2R)-2-[(2S,4Z,6Z,8S,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxo-1-oxacyclooctadeca-4,6-dien-2-yl]cyclopentane-1-carboxylic acid

CAS Registry Number

Not Available

SMILES

C[C@H]1C[C@@H](C)C[C@H](C)[C@H](O)\C(=C/C=C\C[C@H](OC(=O)C[C@H](O)[C@@H](C)C1)[C@@H]1CCC[C@H]1C(O)=O)C#N

InChI Identifier

InChI=1S/C28H43NO6/c1-17-12-18(2)14-20(4)27(32)21(16-29)8-5-6-11-25(22-9-7-10-23(22)28(33)34)35-26(31)15-24(30)19(3)13-17/h5-6,8,17-20,22-25,27,30,32H,7,9-15H2,1-4H3,(H,33,34)/b6-5-,21-8-/t17-,18+,19-,20-,22+,23+,24-,25-,27-/m0/s1

InChI Key

OJCKRNPLOZHAOU-DIMQYJMHSA-N

Experimental Spectra

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 600 MHz, CD3OD, experimental)	[email protected]	Not Available	Not Available	2023-03-17	View Spectrum

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Spectrum Type	Description	Depositor Email	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹H NMR Spectrum (1D, 600.0, Dimethylsulfoxide-d6, simulated)	[email protected]	Not Available	Not Available	2026-02-25	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 150.0, Dimethylsulfoxide-d6, simulated)	[email protected]	Not Available	Not Available	2026-02-25	View Spectrum

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	29452840
Streptomyces RL09-056-NTSA		Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.79	ALOGPS
logP	4.66	ChemAxon
logS	-4.7	ALOGPS
pKa (Strongest Acidic)	3.87	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	127.85 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	135.46 m³·mol⁻¹	ChemAxon
Polarizability	53.91 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

Not Available

References

General References

Sun J, Shao J, Sun C, Song Y, Li Q, Lu L, Hu Y, Gui C, Zhang H, Ju J: Borrelidins F-I, cytotoxic and cell migration inhibiting agents from mangrove-derived Streptomyces rochei SCSIO ZJ89. Bioorg Med Chem. 2018 May 1;26(8):1488-1494. doi: 10.1016/j.bmc.2018.01.010. Epub 2018 Feb 7. [PubMed:29452840 ]
Liu DY, Phillips L, Wilson DM, Fulton KM, Twine SM, Wong A, Linington RG: Collateral sensitivity profiling in drug-resistant Escherichia coli identifies natural products suppressing cephalosporin resistance. Nat Commun. 2023 Apr 8;14(1):1976. doi: 10.1038/s41467-023-37624-4. [PubMed:37031190 ]
DOI: 10.1038/s41467-023-37624-4

Showing NP-Card for Borrelidin F (NP0017652)

MOL for NP0017652 (Borrelidin F)

3D MOL for NP0017652 (Borrelidin F)

3D SDF for NP0017652 (Borrelidin F)

3D-SDF for NP0017652 (Borrelidin F)

PDB for NP0017652 (Borrelidin F)

3D PDB for NP0017652 (Borrelidin F)

SMILES for NP0017652 (Borrelidin F)

INCHI for NP0017652 (Borrelidin F)

Structure for NP0017652 (Borrelidin F)

3D Structure for NP0017652 (Borrelidin F)