NP-MRD: Showing NP-Card for Dichocerazine B (NP0017185)

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Record Information

Version

2.0

Created at

2021-01-06 01:58:06 UTC

Updated at

2021-07-15 17:24:48 UTC

NP-MRD ID

NP0017185

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Dichocerazine B

Provided By

NPAtlas

Description

Dichocerazine B is found in Aspergillus cejpii and Dichotomomyces. Based on a literature review very few articles have been published on Dichocerazine B.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242104213D          

 50 52  0  0  0  0            999 V2000
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    2.3332    3.1027   -0.9389 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

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M  END


  Mrv1652306242104213D          

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  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  2  0  0  0  0
 10 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  1  0  0  0
 23 24  1  0  0  0  0
 22 25  1  0  0  0  0
 25 26  2  0  0  0  0
 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27  3  1  0  0  0  0
 22  8  1  0  0  0  0
 19  9  1  0  0  0  0
  1 29  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  4 32  1  0  0  0  0
  4 33  1  0  0  0  0
  5 34  1  0  0  0  0
  9 35  1  1  0  0  0
 10 36  1  6  0  0  0
 13 37  1  0  0  0  0
 13 38  1  0  0  0  0
 13 39  1  0  0  0  0
 17 40  1  0  0  0  0
 18 41  1  0  0  0  0
 20 42  1  0  0  0  0
 21 43  1  0  0  0  0
 21 44  1  0  0  0  0
 24 45  1  0  0  0  0
 24 46  1  0  0  0  0
 24 47  1  0  0  0  0
 28 48  1  0  0  0  0
 28 49  1  0  0  0  0
 28 50  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0017185

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])[C@@]1(SC([H])([H])[H])N(C(=O)[C@]2(SC([H])([H])[H])N(C1=O)[C@]1([H])[C@@]([H])(OC(=O)C([H])([H])[H])C(=O)C([H])=C([H])[C@]1(O[H])C2([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C17H22N2O7S2/c1-9(21)26-11-10(22)5-6-15(25)7-16(27-3)13(23)18(2)17(8-20,28-4)14(24)19(16)12(11)15/h5-6,11-12,20,25H,7-8H2,1-4H3/t11-,12+,15-,16-,17-/m0/s1

> <INCHI_KEY>
UDENPRNEBPZXPX-GVDRCSPZSA-N

> <FORMULA>
C17H22N2O7S2

> <MOLECULAR_WEIGHT>
430.49

> <EXACT_MASS>
430.086843404

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
50

> <JCHEM_AVERAGE_POLARIZABILITY>
40.996914729303114

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(3S,5aR,6R,9aR,10aS)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulfanyl)-1,4,7-trioxo-1H,2H,3H,4H,5aH,6H,7H,9aH,10H,10aH-pyrazino[1,2-a]indol-6-yl acetate

> <ALOGPS_LOGP>
-0.24

> <JCHEM_LOGP>
0.3605533720000001

> <ALOGPS_LOGS>
-2.33

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.193511450490341

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.351844856352663

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1540123427222353

> <JCHEM_POLAR_SURFACE_AREA>
124.45

> <JCHEM_REFRACTIVITY>
102.48859999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.01e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,5aR,6R,9aR,10aS)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulfanyl)-1,4,7-trioxo-5aH,6H,10H-pyrazino[1,2-a]indol-6-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 50 52  0  0  0  0  0  0  0  0999 V2000
   -4.4388    2.7150   -0.4290 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8328    2.4560    0.3245 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8822    1.1125   -0.4063 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5151    1.4401   -1.8657 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6577    0.4256   -2.2799 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5445    1.1140    0.2893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1281    2.2246    0.7083 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2118   -0.0547    0.4689 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.6362   -0.2576    0.6380 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4510    0.3981   -0.4231 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3168    1.3504    0.1664 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2129    2.6837   -0.1261 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1225    3.7123    0.4904 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3332    3.1027   -0.9389 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2030   -0.5554   -1.2699 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3413   -0.2979   -2.4816 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7631   -1.7667   -0.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0479   -2.3091    0.3098 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7997   -1.7312    0.7608 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6019   -2.0969    2.1050 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5903   -2.2560   -0.0278 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4774   -1.3241    0.5022 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8085   -1.8453    2.2226 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6708   -3.4374    2.1955 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7253   -1.3295   -0.2442 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0972   -2.3889   -0.8101 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5229   -0.1589   -0.3393 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9948   -0.2673   -0.3717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4214    2.6335   -1.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7302    3.7918   -0.2303 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2655    2.1361    0.0298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4241    1.4442   -2.5001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9921    2.4054   -1.9250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1115   -0.2193   -2.8841 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8799    0.2017    1.6315 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7552    0.9554   -1.0841 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6433    4.1859   -0.3833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5148    4.4141    1.0591 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8157    3.1674    1.1541 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6919   -2.1590   -1.0473 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4301   -3.2051    0.7712 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4026   -2.5407    2.4783 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7610   -2.1466   -1.1103 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3272   -3.2693    0.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9778   -4.2869    2.0462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1277   -3.6131    3.2125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4463   -3.5048    1.4253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2780   -1.3335   -0.5107 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4226    0.2734   -1.2137 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3600    0.0116    0.6301 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  3  2  1  1
  3  4  1  0
  4  5  1  0
  3  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  2  0
 10 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  1  1
 19 21  1  0
 21 22  1  0
 22 23  1  1
 23 24  1  0
 22 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 27  3  1  0
 22  8  1  0
 19  9  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  4 32  1  0
  4 33  1  0
  5 34  1  0
  9 35  1  1
 10 36  1  6
 13 37  1  0
 13 38  1  0
 13 39  1  0
 17 40  1  0
 18 41  1  0
 20 42  1  0
 21 43  1  0
 21 44  1  0
 24 45  1  0
 24 46  1  0
 24 47  1  0
 28 48  1  0
 28 49  1  0
 28 50  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -4.439   2.715  -0.429  0.00  0.00           C+0
HETATM    2  S   UNK     0      -2.833   2.456   0.325  0.00  0.00           S+0
HETATM    3  C   UNK     0      -1.882   1.113  -0.406  0.00  0.00           C+0
HETATM    4  C   UNK     0      -1.515   1.440  -1.866  0.00  0.00           C+0
HETATM    5  O   UNK     0      -0.658   0.426  -2.280  0.00  0.00           O+0
HETATM    6  C   UNK     0      -0.545   1.114   0.289  0.00  0.00           C+0
HETATM    7  O   UNK     0      -0.128   2.225   0.708  0.00  0.00           O+0
HETATM    8  N   UNK     0       0.212  -0.055   0.469  0.00  0.00           N+0
HETATM    9  C   UNK     0       1.636  -0.258   0.638  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.451   0.398  -0.423  0.00  0.00           C+0
HETATM   11  O   UNK     0       3.317   1.350   0.166  0.00  0.00           O+0
HETATM   12  C   UNK     0       3.213   2.684  -0.126  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.122   3.712   0.490  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.333   3.103  -0.939  0.00  0.00           O+0
HETATM   15  C   UNK     0       3.203  -0.555  -1.270  0.00  0.00           C+0
HETATM   16  O   UNK     0       3.341  -0.298  -2.482  0.00  0.00           O+0
HETATM   17  C   UNK     0       3.763  -1.767  -0.678  0.00  0.00           C+0
HETATM   18  C   UNK     0       3.048  -2.309   0.310  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.800  -1.731   0.761  0.00  0.00           C+0
HETATM   20  O   UNK     0       1.602  -2.097   2.105  0.00  0.00           O+0
HETATM   21  C   UNK     0       0.590  -2.256  -0.028  0.00  0.00           C+0
HETATM   22  C   UNK     0      -0.477  -1.324   0.502  0.00  0.00           C+0
HETATM   23  S   UNK     0      -0.809  -1.845   2.223  0.00  0.00           S+0
HETATM   24  C   UNK     0      -1.671  -3.437   2.196  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.725  -1.329  -0.244  0.00  0.00           C+0
HETATM   26  O   UNK     0      -2.097  -2.389  -0.810  0.00  0.00           O+0
HETATM   27  N   UNK     0      -2.523  -0.159  -0.339  0.00  0.00           N+0
HETATM   28  C   UNK     0      -3.995  -0.267  -0.372  0.00  0.00           C+0
HETATM   29  H   UNK     0      -4.421   2.634  -1.552  0.00  0.00           H+0
HETATM   30  H   UNK     0      -4.730   3.792  -0.230  0.00  0.00           H+0
HETATM   31  H   UNK     0      -5.266   2.136   0.030  0.00  0.00           H+0
HETATM   32  H   UNK     0      -2.424   1.444  -2.500  0.00  0.00           H+0
HETATM   33  H   UNK     0      -0.992   2.405  -1.925  0.00  0.00           H+0
HETATM   34  H   UNK     0      -1.111  -0.219  -2.884  0.00  0.00           H+0
HETATM   35  H   UNK     0       1.880   0.202   1.632  0.00  0.00           H+0
HETATM   36  H   UNK     0       1.755   0.955  -1.084  0.00  0.00           H+0
HETATM   37  H   UNK     0       4.643   4.186  -0.383  0.00  0.00           H+0
HETATM   38  H   UNK     0       3.515   4.414   1.059  0.00  0.00           H+0
HETATM   39  H   UNK     0       4.816   3.167   1.154  0.00  0.00           H+0
HETATM   40  H   UNK     0       4.692  -2.159  -1.047  0.00  0.00           H+0
HETATM   41  H   UNK     0       3.430  -3.205   0.771  0.00  0.00           H+0
HETATM   42  H   UNK     0       2.403  -2.541   2.478  0.00  0.00           H+0
HETATM   43  H   UNK     0       0.761  -2.147  -1.110  0.00  0.00           H+0
HETATM   44  H   UNK     0       0.327  -3.269   0.293  0.00  0.00           H+0
HETATM   45  H   UNK     0      -0.978  -4.287   2.046  0.00  0.00           H+0
HETATM   46  H   UNK     0      -2.128  -3.613   3.212  0.00  0.00           H+0
HETATM   47  H   UNK     0      -2.446  -3.505   1.425  0.00  0.00           H+0
HETATM   48  H   UNK     0      -4.278  -1.333  -0.511  0.00  0.00           H+0
HETATM   49  H   UNK     0      -4.423   0.273  -1.214  0.00  0.00           H+0
HETATM   50  H   UNK     0      -4.360   0.012   0.630  0.00  0.00           H+0
CONECT    1    2   29   30   31                                             
CONECT    2    1    3                                                       
CONECT    3    2    4    6   27                                             
CONECT    4    3    5   32   33                                             
CONECT    5    4   34                                                       
CONECT    6    3    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9   22                                                  
CONECT    9    8   10   19   35                                             
CONECT   10    9   11   15   36                                             
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12   37   38   39                                             
CONECT   14   12                                                            
CONECT   15   10   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   40                                                  
CONECT   18   17   19   41                                                  
CONECT   19   18   20   21    9                                             
CONECT   20   19   42                                                       
CONECT   21   19   22   43   44                                             
CONECT   22   21   23   25    8                                             
CONECT   23   22   24                                                       
CONECT   24   23   45   46   47                                             
CONECT   25   22   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28    3                                                  
CONECT   28   27   48   49   50                                             
CONECT   29    1                                                            
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    4                                                            
CONECT   33    4                                                            
CONECT   34    5                                                            
CONECT   35    9                                                            
CONECT   36   10                                                            
CONECT   37   13                                                            
CONECT   38   13                                                            
CONECT   39   13                                                            
CONECT   40   17                                                            
CONECT   41   18                                                            
CONECT   42   20                                                            
CONECT   43   21                                                            
CONECT   44   21                                                            
CONECT   45   24                                                            
CONECT   46   24                                                            
CONECT   47   24                                                            
CONECT   48   28                                                            
CONECT   49   28                                                            
CONECT   50   28                                                            
MASTER        0    0    0    0    0    0    0    0   50    0  104    0
END

RDKit          3D

50 52  0  0  0  0  0  0  0  0999 V2000
   -4.4388    2.7150   -0.4290 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8328    2.4560    0.3245 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8822    1.1125   -0.4063 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.5151    1.4401   -1.8657 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6577    0.4256   -2.2799 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5445    1.1140    0.2893 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1281    2.2246    0.7083 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2118   -0.0547    0.4689 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.6362   -0.2576    0.6380 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4510    0.3981   -0.4231 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.3168    1.3504    0.1664 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2129    2.6837   -0.1261 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1225    3.7123    0.4904 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3332    3.1027   -0.9389 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2030   -0.5554   -1.2699 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3413   -0.2979   -2.4816 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7631   -1.7667   -0.6781 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0479   -2.3091    0.3098 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7997   -1.7312    0.7608 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6019   -2.0969    2.1050 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5903   -2.2560   -0.0278 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4774   -1.3241    0.5022 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8085   -1.8453    2.2226 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6708   -3.4374    2.1955 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7253   -1.3295   -0.2442 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0972   -2.3889   -0.8101 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5229   -0.1589   -0.3393 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9948   -0.2673   -0.3717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4214    2.6335   -1.5515 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7302    3.7918   -0.2303 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2655    2.1361    0.0298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4241    1.4442   -2.5001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9921    2.4054   -1.9250 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1115   -0.2193   -2.8841 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8799    0.2017    1.6315 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7552    0.9554   -1.0841 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6433    4.1859   -0.3833 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5148    4.4141    1.0591 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8157    3.1674    1.1541 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6919   -2.1590   -1.0473 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4301   -3.2051    0.7712 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4026   -2.5407    2.4783 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7610   -2.1466   -1.1103 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3272   -3.2693    0.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9778   -4.2869    2.0462 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1277   -3.6131    3.2125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4463   -3.5048    1.4253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2780   -1.3335   -0.5107 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4226    0.2734   -1.2137 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3600    0.0116    0.6301 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  3  2  1  1
  3  4  1  0
  4  5  1  0
  3  6  1  0
  6  7  2  0
  6  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  2  0
 10 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  1  1
 19 21  1  0
 21 22  1  0
 22 23  1  1
 23 24  1  0
 22 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 27  3  1  0
 22  8  1  0
 19  9  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  4 32  1  0
  4 33  1  0
  5 34  1  0
  9 35  1  1
 10 36  1  6
 13 37  1  0
 13 38  1  0
 13 39  1  0
 17 40  1  0
 18 41  1  0
 20 42  1  0
 21 43  1  0
 21 44  1  0
 24 45  1  0
 24 46  1  0
 24 47  1  0
 28 48  1  0
 28 49  1  0
 28 50  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(3S,5AR,6R,9ar,10as)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulfanyl)-1,4,7-trioxo-1H,2H,3H,4H,5ah,6H,7H,9ah,10H,10ah-pyrazino[1,2-a]indol-6-yl acetic acid	Generator
(3S,5AR,6R,9ar,10as)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulphanyl)-1,4,7-trioxo-1H,2H,3H,4H,5ah,6H,7H,9ah,10H,10ah-pyrazino[1,2-a]indol-6-yl acetate	Generator
(3S,5AR,6R,9ar,10as)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulphanyl)-1,4,7-trioxo-1H,2H,3H,4H,5ah,6H,7H,9ah,10H,10ah-pyrazino[1,2-a]indol-6-yl acetic acid	Generator

Chemical Formula

C₁₇H₂₂N₂O₇S₂

Average Mass

430.4900 Da

Monoisotopic Mass

430.08684 Da

IUPAC Name

(3S,5aR,6R,9aR,10aS)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulfanyl)-1,4,7-trioxo-1H,2H,3H,4H,5aH,6H,7H,9aH,10H,10aH-pyrazino[1,2-a]indol-6-yl acetate

Traditional Name

(3S,5aR,6R,9aR,10aS)-9a-hydroxy-3-(hydroxymethyl)-2-methyl-3,10a-bis(methylsulfanyl)-1,4,7-trioxo-5aH,6H,10H-pyrazino[1,2-a]indol-6-yl acetate

CAS Registry Number

Not Available

SMILES

CS[C@]12C[C@@]3(O)C=CC(=O)[C@H](OC(C)=O)[C@H]3N1C(=O)[C@](CO)(SC)N(C)C2=O

InChI Identifier

InChI=1S/C17H22N2O7S2/c1-9(21)26-11-10(22)5-6-15(25)7-16(27-3)13(23)18(2)17(8-20,28-4)14(24)19(16)12(11)15/h5-6,11-12,20,25H,7-8H2,1-4H3/t11-,12+,15-,16-,17-/m0/s1

InChI Key

UDENPRNEBPZXPX-GVDRCSPZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aspergillus cejpii	LOTUS Database	35616633
Dichotomomyces	NPAtlas	29104243

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.24	ALOGPS
logP	0.36	ChemAxon
logS	-2.3	ALOGPS
pKa (Strongest Acidic)	13.35	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	124.45 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	102.49 m³·mol⁻¹	ChemAxon
Polarizability	41 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA023253

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78441740

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139590537

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Dichocerazine B (NP0017185)

MOL for NP0017185 (Dichocerazine B)

3D MOL for NP0017185 (Dichocerazine B)

3D SDF for NP0017185 (Dichocerazine B)

3D-SDF for NP0017185 (Dichocerazine B)

PDB for NP0017185 (Dichocerazine B)

3D PDB for NP0017185 (Dichocerazine B)

SMILES for NP0017185 (Dichocerazine B)

INCHI for NP0017185 (Dichocerazine B)

Structure for NP0017185 (Dichocerazine B)

3D Structure for NP0017185 (Dichocerazine B)