NP-MRD: Showing NP-Card for Dibohemamine F (NP0017097)

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Record Information

Version

2.0

Created at

2021-01-06 01:54:22 UTC

Updated at

2021-07-15 17:24:33 UTC

NP-MRD ID

NP0017097

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Dibohemamine F

Provided By

NPAtlas

Description

Dibohemamine F is found in Streptomyces. Dibohemamine F was first documented in 2017 (PMID: 29035560). Based on a literature review very few articles have been published on Dibohemamine F.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307042107243D          

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M  END

     RDKit          3D

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  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  2  3
 17 18  1  0
 17 19  1  0
 12 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  6
 26 28  1  0
 28 29  2  0
  9 30  1  0
 30 31  2  0
 30 32  1  0
 32 33  1  6
 32 34  1  0
 34 35  1  0
 35 36  1  0
 35 37  1  0
 37 38  1  0
 37 39  1  0
 39  8  1  0
 28 11  1  0
 39 32  1  0
 26 20  1  0
 25 23  1  0
  1 40  1  0
  1 41  1  0
  1 42  1  0
  3 43  1  0
  3 44  1  0
  3 45  1  0
  4 46  1  0
  7 47  1  0
 10 48  1  0
 10 49  1  0
 13 50  1  0
 16 51  1  0
 18 52  1  0
 18 53  1  0
 18 54  1  0
 19 55  1  0
 19 56  1  0
 19 57  1  0
 21 58  1  6
 22 59  1  0
 22 60  1  0
 22 61  1  0
 23 62  1  6
 25 63  1  6
 27 64  1  0
 27 65  1  0
 27 66  1  0
 33 67  1  0
 33 68  1  0
 33 69  1  0
 34 70  1  0
 34 71  1  0
 35 72  1  6
 36 73  1  0
 37 74  1  6
 38 75  1  0
 38 76  1  0
 38 77  1  0
M  END


  Mrv1652307042107243D          

 77 81  0  0  0  0            999 V2000
    6.1412    4.9730   -0.3667 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8285    3.5242   -0.2224 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9307    2.5213   -0.2888 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5790    3.1746   -0.0413 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1742    1.7583    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0648    0.8881    0.0671 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8294    1.4121    0.3016 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2551    0.1475    0.4682 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9412   -0.0356    0.6335 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1750    0.9355    0.6890 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1590    0.7207   -0.4445 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4571    0.3927   -0.3508 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1004    0.1889    0.8933 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4285   -0.1656    1.1462 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2387   -0.3575    0.2260 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9187   -0.3252    2.5203 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1363   -0.6547    2.8117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5949   -0.8072    4.2389 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1451   -0.9044    1.7643 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0241    0.3567   -1.6819 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1965    0.4944   -2.4678 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.0425    1.7071   -2.1020 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6970    0.6927   -3.8713 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9090    1.9036   -3.9367 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2431    0.6938   -3.8505 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9068    0.0683   -2.5323 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6372   -1.4112   -2.6656 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8046    0.7940   -1.8466 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1718    1.3265   -2.3600 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7085   -1.4822    0.7471 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2886   -2.0655    1.2271 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9223   -2.1226    0.1643 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8212   -2.3664   -1.2995 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2584   -3.3398    0.9820 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.7601   -3.3227    0.9398 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3122   -3.9015    2.0685 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1365   -1.8552    0.8076 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7653   -1.4764    2.1372 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9237   -1.1218    0.5324 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.6740    5.2734   -1.3469 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7261    5.5808    0.4401 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2404    5.1577   -0.4000 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0426    1.9720    0.6692 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8175    1.8328   -1.1523 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8899    3.0575   -0.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7964    3.9061    0.0022 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1622    2.2592    0.3179 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2394    1.9751    0.5595 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6601    0.8099    1.6511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5103    0.3189    1.7774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2183   -0.1561    3.3561 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2024   -1.7449    4.2648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2945    0.0326    4.4166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7608   -0.8432    4.9381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8781   -1.7475    1.0773 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1343   -1.1938    2.1892 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3517   -0.0220    1.1269 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8374   -0.4214   -2.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4762    2.3051   -1.3708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2029    2.2941   -2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0406    1.3879   -1.7358 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3342    0.4953   -4.7369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6274    0.4171   -4.7448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7047   -1.9556   -1.7264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6381   -1.5012   -3.1482 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3827   -1.7863   -3.4262 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1055   -1.4990   -1.8993 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3790   -3.2776   -1.6070 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7444   -2.5894   -1.5217 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8129   -4.2592    0.6081 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9697   -3.1063    2.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0766   -3.8765    0.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5950   -4.1488    2.7192 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8133   -1.7433   -0.0545 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8656   -1.5476    2.0283 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4388   -2.1601    2.9515 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4443   -0.4546    2.4004 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  2  3  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  2  3  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 12 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  6  0  0  0
 26 28  1  0  0  0  0
 28 29  2  0  0  0  0
  9 30  1  0  0  0  0
 30 31  2  0  0  0  0
 30 32  1  0  0  0  0
 32 33  1  6  0  0  0
 32 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 35 37  1  0  0  0  0
 37 38  1  0  0  0  0
 37 39  1  0  0  0  0
 39  8  1  0  0  0  0
 28 11  1  0  0  0  0
 39 32  1  0  0  0  0
 26 20  1  0  0  0  0
 25 23  1  0  0  0  0
  1 40  1  0  0  0  0
  1 41  1  0  0  0  0
  1 42  1  0  0  0  0
  3 43  1  0  0  0  0
  3 44  1  0  0  0  0
  3 45  1  0  0  0  0
  4 46  1  0  0  0  0
  7 47  1  0  0  0  0
 10 48  1  0  0  0  0
 10 49  1  0  0  0  0
 13 50  1  0  0  0  0
 16 51  1  0  0  0  0
 18 52  1  0  0  0  0
 18 53  1  0  0  0  0
 18 54  1  0  0  0  0
 19 55  1  0  0  0  0
 19 56  1  0  0  0  0
 19 57  1  0  0  0  0
 21 58  1  6  0  0  0
 22 59  1  0  0  0  0
 22 60  1  0  0  0  0
 22 61  1  0  0  0  0
 23 62  1  6  0  0  0
 25 63  1  6  0  0  0
 27 64  1  0  0  0  0
 27 65  1  0  0  0  0
 27 66  1  0  0  0  0
 33 67  1  0  0  0  0
 33 68  1  0  0  0  0
 33 69  1  0  0  0  0
 34 70  1  0  0  0  0
 34 71  1  0  0  0  0
 35 72  1  6  0  0  0
 36 73  1  0  0  0  0
 37 74  1  6  0  0  0
 38 75  1  0  0  0  0
 38 76  1  0  0  0  0
 38 77  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0017097

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])C([H])([H])[C@@]2(N(C(N([H])C(=O)C([H])=C(C([H])([H])[H])C([H])([H])[H])=C(C2=O)C([H])([H])C2=C(N([H])C(=O)C([H])=C(C([H])([H])[H])C([H])([H])[H])N3[C@@]([H])(C([H])([H])[H])[C@@]4([H])O[C@@]4([H])[C@]3(C2=O)C([H])([H])[H])[C@@]1([H])C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C29H38N4O6/c1-13(2)9-20(35)30-26-17(23(37)28(7)12-19(34)15(5)32(26)28)11-18-24(38)29(8)25-22(39-25)16(6)33(29)27(18)31-21(36)10-14(3)4/h9-10,15-16,19,22,25,34H,11-12H2,1-8H3,(H,30,35)(H,31,36)/t15-,16-,19-,22+,25+,28-,29+/m0/s1

> <INCHI_KEY>
MSVQLOHTXMXTGS-DRQMPHHESA-N

> <FORMULA>
C29H38N4O6

> <MOLECULAR_WEIGHT>
538.645

> <EXACT_MASS>
538.27913496

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
77

> <JCHEM_AVERAGE_POLARIZABILITY>
58.86097424227189

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
N-[(1aR,2S,6aS,6bS)-5-{[(5S,6S,7aS)-6-hydroxy-5,7a-dimethyl-3-(3-methylbut-2-enamido)-1-oxo-5,6,7,7a-tetrahydro-1H-pyrrolizin-2-yl]methyl}-2,6a-dimethyl-6-oxo-1aH,2H,6H,6aH,6bH-oxireno[2,3-a]pyrrolizin-4-yl]-3-methylbut-2-enamide

> <ALOGPS_LOGP>
1.82

> <JCHEM_LOGP>
2.988956045666666

> <ALOGPS_LOGS>
-2.67

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.792579735233286

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.197189795375767

> <JCHEM_PKA_STRONGEST_BASIC>
-1.5163007500745467

> <JCHEM_POLAR_SURFACE_AREA>
131.57999999999998

> <JCHEM_REFRACTIVITY>
165.3124

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.15e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
N-[(1aR,2S,6aS,6bS)-5-{[(5S,6S,7aS)-6-hydroxy-5,7a-dimethyl-3-(3-methylbut-2-enamido)-1-oxo-6,7-dihydro-5H-pyrrolizin-2-yl]methyl}-2,6a-dimethyl-6-oxo-1aH,2H,6bH-oxireno[2,3-a]pyrrolizin-4-yl]-3-methylbut-2-enamide

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 77 81  0  0  0  0  0  0  0  0999 V2000
    6.1412    4.9730   -0.3667 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8285    3.5242   -0.2224 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9307    2.5213   -0.2888 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5790    3.1746   -0.0413 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1742    1.7583    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0648    0.8881    0.0671 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8294    1.4121    0.3016 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2551    0.1475    0.4682 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9412   -0.0356    0.6335 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1750    0.9355    0.6890 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1590    0.7207   -0.4445 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4571    0.3927   -0.3508 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1004    0.1889    0.8933 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4285   -0.1656    1.1462 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2387   -0.3575    0.2260 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9187   -0.3252    2.5203 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1363   -0.6547    2.8117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5949   -0.8072    4.2389 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1451   -0.9044    1.7643 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0241    0.3567   -1.6819 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1965    0.4944   -2.4678 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.0425    1.7071   -2.1020 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6970    0.6927   -3.8713 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9090    1.9036   -3.9367 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2431    0.6938   -3.8505 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9068    0.0683   -2.5323 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6372   -1.4112   -2.6656 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8046    0.7940   -1.8466 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1718    1.3265   -2.3600 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7085   -1.4822    0.7471 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2886   -2.0655    1.2271 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9223   -2.1226    0.1643 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8212   -2.3664   -1.2995 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2584   -3.3398    0.9820 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7601   -3.3227    0.9398 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3122   -3.9015    2.0685 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1365   -1.8552    0.8076 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7653   -1.4764    2.1372 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9237   -1.1218    0.5324 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.6740    5.2734   -1.3469 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7261    5.5808    0.4401 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2404    5.1577   -0.4000 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0426    1.9720    0.6692 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8175    1.8328   -1.1523 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8899    3.0575   -0.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7964    3.9061    0.0022 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1622    2.2592    0.3179 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2394    1.9751    0.5595 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6601    0.8099    1.6511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5103    0.3189    1.7774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2183   -0.1561    3.3561 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2024   -1.7449    4.2648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2945    0.0326    4.4166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7608   -0.8432    4.9381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8781   -1.7475    1.0773 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1343   -1.1938    2.1892 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3517   -0.0220    1.1269 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8374   -0.4214   -2.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4762    2.3051   -1.3708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2029    2.2941   -2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0406    1.3879   -1.7358 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3342    0.4953   -4.7369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6274    0.4171   -4.7448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7047   -1.9556   -1.7264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6381   -1.5012   -3.1482 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3827   -1.7863   -3.4262 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1055   -1.4990   -1.8993 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3790   -3.2776   -1.6070 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7444   -2.5894   -1.5217 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8129   -4.2592    0.6081 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9697   -3.1063    2.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0766   -3.8765    0.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5950   -4.1488    2.7192 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8133   -1.7433   -0.0545 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8656   -1.5476    2.0283 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4388   -2.1601    2.9515 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4443   -0.4546    2.4004 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
  4  5  1  0
  5  6  2  0
  5  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  2  3
 17 18  1  0
 17 19  1  0
 12 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  6
 26 28  1  0
 28 29  2  0
  9 30  1  0
 30 31  2  0
 30 32  1  0
 32 33  1  6
 32 34  1  0
 34 35  1  0
 35 36  1  0
 35 37  1  0
 37 38  1  0
 37 39  1  0
 39  8  1  0
 28 11  1  0
 39 32  1  0
 26 20  1  0
 25 23  1  0
  1 40  1  0
  1 41  1  0
  1 42  1  0
  3 43  1  0
  3 44  1  0
  3 45  1  0
  4 46  1  0
  7 47  1  0
 10 48  1  0
 10 49  1  0
 13 50  1  0
 16 51  1  0
 18 52  1  0
 18 53  1  0
 18 54  1  0
 19 55  1  0
 19 56  1  0
 19 57  1  0
 21 58  1  6
 22 59  1  0
 22 60  1  0
 22 61  1  0
 23 62  1  6
 25 63  1  6
 27 64  1  0
 27 65  1  0
 27 66  1  0
 33 67  1  0
 33 68  1  0
 33 69  1  0
 34 70  1  0
 34 71  1  0
 35 72  1  6
 36 73  1  0
 37 74  1  6
 38 75  1  0
 38 76  1  0
 38 77  1  0
M  END

HEADER    PROTEIN                                 04-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-JUL-21         0                                  
HETATM    1  C   UNK     0       6.141   4.973  -0.367  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.829   3.524  -0.222  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.931   2.521  -0.289  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.579   3.175  -0.041  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.174   1.758   0.112  0.00  0.00           C+0
HETATM    6  O   UNK     0       5.065   0.888   0.067  0.00  0.00           O+0
HETATM    7  N   UNK     0       2.829   1.412   0.302  0.00  0.00           N+0
HETATM    8  C   UNK     0       2.255   0.148   0.468  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.941  -0.036   0.634  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.175   0.936   0.689  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.159   0.721  -0.445  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.457   0.393  -0.351  0.00  0.00           C+0
HETATM   13  N   UNK     0      -3.100   0.189   0.893  0.00  0.00           N+0
HETATM   14  C   UNK     0      -4.428  -0.166   1.146  0.00  0.00           C+0
HETATM   15  O   UNK     0      -5.239  -0.358   0.226  0.00  0.00           O+0
HETATM   16  C   UNK     0      -4.919  -0.325   2.520  0.00  0.00           C+0
HETATM   17  C   UNK     0      -6.136  -0.655   2.812  0.00  0.00           C+0
HETATM   18  C   UNK     0      -6.595  -0.807   4.239  0.00  0.00           C+0
HETATM   19  C   UNK     0      -7.145  -0.904   1.764  0.00  0.00           C+0
HETATM   20  N   UNK     0      -3.024   0.357  -1.682  0.00  0.00           N+0
HETATM   21  C   UNK     0      -4.197   0.494  -2.468  0.00  0.00           C+0
HETATM   22  C   UNK     0      -5.043   1.707  -2.102  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.697   0.693  -3.871  0.00  0.00           C+0
HETATM   24  O   UNK     0      -2.909   1.904  -3.937  0.00  0.00           O+0
HETATM   25  C   UNK     0      -2.243   0.694  -3.850  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.907   0.068  -2.532  0.00  0.00           C+0
HETATM   27  C   UNK     0      -1.637  -1.411  -2.666  0.00  0.00           C+0
HETATM   28  C   UNK     0      -0.805   0.794  -1.847  0.00  0.00           C+0
HETATM   29  O   UNK     0       0.172   1.327  -2.360  0.00  0.00           O+0
HETATM   30  C   UNK     0       0.709  -1.482   0.747  0.00  0.00           C+0
HETATM   31  O   UNK     0      -0.289  -2.066   1.227  0.00  0.00           O+0
HETATM   32  C   UNK     0       1.922  -2.123   0.164  0.00  0.00           C+0
HETATM   33  C   UNK     0       1.821  -2.366  -1.300  0.00  0.00           C+0
HETATM   34  C   UNK     0       2.258  -3.340   0.982  0.00  0.00           C+0
HETATM   35  C   UNK     0       3.760  -3.323   0.940  0.00  0.00           C+0
HETATM   36  O   UNK     0       4.312  -3.902   2.068  0.00  0.00           O+0
HETATM   37  C   UNK     0       4.136  -1.855   0.808  0.00  0.00           C+0
HETATM   38  C   UNK     0       4.765  -1.476   2.137  0.00  0.00           C+0
HETATM   39  N   UNK     0       2.924  -1.122   0.532  0.00  0.00           N+0
HETATM   40  H   UNK     0       5.674   5.273  -1.347  0.00  0.00           H+0
HETATM   41  H   UNK     0       5.726   5.581   0.440  0.00  0.00           H+0
HETATM   42  H   UNK     0       7.240   5.158  -0.400  0.00  0.00           H+0
HETATM   43  H   UNK     0       7.043   1.972   0.669  0.00  0.00           H+0
HETATM   44  H   UNK     0       6.817   1.833  -1.152  0.00  0.00           H+0
HETATM   45  H   UNK     0       7.890   3.058  -0.440  0.00  0.00           H+0
HETATM   46  H   UNK     0       3.796   3.906   0.002  0.00  0.00           H+0
HETATM   47  H   UNK     0       2.162   2.259   0.318  0.00  0.00           H+0
HETATM   48  H   UNK     0       0.239   1.975   0.560  0.00  0.00           H+0
HETATM   49  H   UNK     0      -0.660   0.810   1.651  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.510   0.319   1.777  0.00  0.00           H+0
HETATM   51  H   UNK     0      -4.218  -0.156   3.356  0.00  0.00           H+0
HETATM   52  H   UNK     0      -7.202  -1.745   4.265  0.00  0.00           H+0
HETATM   53  H   UNK     0      -7.295   0.033   4.417  0.00  0.00           H+0
HETATM   54  H   UNK     0      -5.761  -0.843   4.938  0.00  0.00           H+0
HETATM   55  H   UNK     0      -6.878  -1.748   1.077  0.00  0.00           H+0
HETATM   56  H   UNK     0      -8.134  -1.194   2.189  0.00  0.00           H+0
HETATM   57  H   UNK     0      -7.352  -0.022   1.127  0.00  0.00           H+0
HETATM   58  H   UNK     0      -4.837  -0.421  -2.398  0.00  0.00           H+0
HETATM   59  H   UNK     0      -4.476   2.305  -1.371  0.00  0.00           H+0
HETATM   60  H   UNK     0      -5.203   2.294  -3.000  0.00  0.00           H+0
HETATM   61  H   UNK     0      -6.041   1.388  -1.736  0.00  0.00           H+0
HETATM   62  H   UNK     0      -4.334   0.495  -4.737  0.00  0.00           H+0
HETATM   63  H   UNK     0      -1.627   0.417  -4.745  0.00  0.00           H+0
HETATM   64  H   UNK     0      -1.705  -1.956  -1.726  0.00  0.00           H+0
HETATM   65  H   UNK     0      -0.638  -1.501  -3.148  0.00  0.00           H+0
HETATM   66  H   UNK     0      -2.383  -1.786  -3.426  0.00  0.00           H+0
HETATM   67  H   UNK     0       2.106  -1.499  -1.899  0.00  0.00           H+0
HETATM   68  H   UNK     0       2.379  -3.278  -1.607  0.00  0.00           H+0
HETATM   69  H   UNK     0       0.744  -2.589  -1.522  0.00  0.00           H+0
HETATM   70  H   UNK     0       1.813  -4.259   0.608  0.00  0.00           H+0
HETATM   71  H   UNK     0       1.970  -3.106   2.044  0.00  0.00           H+0
HETATM   72  H   UNK     0       4.077  -3.877   0.020  0.00  0.00           H+0
HETATM   73  H   UNK     0       3.595  -4.149   2.719  0.00  0.00           H+0
HETATM   74  H   UNK     0       4.813  -1.743  -0.055  0.00  0.00           H+0
HETATM   75  H   UNK     0       5.866  -1.548   2.028  0.00  0.00           H+0
HETATM   76  H   UNK     0       4.439  -2.160   2.951  0.00  0.00           H+0
HETATM   77  H   UNK     0       4.444  -0.455   2.400  0.00  0.00           H+0
CONECT    1    2   40   41   42                                             
CONECT    2    1    3    4                                                  
CONECT    3    2   43   44   45                                             
CONECT    4    2    5   46                                                  
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8   47                                                  
CONECT    8    7    9   39                                                  
CONECT    9    8   10   30                                                  
CONECT   10    9   11   48   49                                             
CONECT   11   10   12   28                                                  
CONECT   12   11   13   20                                                  
CONECT   13   12   14   50                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17   51                                                  
CONECT   17   16   18   19                                                  
CONECT   18   17   52   53   54                                             
CONECT   19   17   55   56   57                                             
CONECT   20   12   21   26                                                  
CONECT   21   20   22   23   58                                             
CONECT   22   21   59   60   61                                             
CONECT   23   21   24   25   62                                             
CONECT   24   23   25                                                       
CONECT   25   24   26   23   63                                             
CONECT   26   25   27   28   20                                             
CONECT   27   26   64   65   66                                             
CONECT   28   26   29   11                                                  
CONECT   29   28                                                            
CONECT   30    9   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33   34   39                                             
CONECT   33   32   67   68   69                                             
CONECT   34   32   35   70   71                                             
CONECT   35   34   36   37   72                                             
CONECT   36   35   73                                                       
CONECT   37   35   38   39   74                                             
CONECT   38   37   75   76   77                                             
CONECT   39   37    8   32                                                  
CONECT   40    1                                                            
CONECT   41    1                                                            
CONECT   42    1                                                            
CONECT   43    3                                                            
CONECT   44    3                                                            
CONECT   45    3                                                            
CONECT   46    4                                                            
CONECT   47    7                                                            
CONECT   48   10                                                            
CONECT   49   10                                                            
CONECT   50   13                                                            
CONECT   51   16                                                            
CONECT   52   18                                                            
CONECT   53   18                                                            
CONECT   54   18                                                            
CONECT   55   19                                                            
CONECT   56   19                                                            
CONECT   57   19                                                            
CONECT   58   21                                                            
CONECT   59   22                                                            
CONECT   60   22                                                            
CONECT   61   22                                                            
CONECT   62   23                                                            
CONECT   63   25                                                            
CONECT   64   27                                                            
CONECT   65   27                                                            
CONECT   66   27                                                            
CONECT   67   33                                                            
CONECT   68   33                                                            
CONECT   69   33                                                            
CONECT   70   34                                                            
CONECT   71   34                                                            
CONECT   72   35                                                            
CONECT   73   36                                                            
CONECT   74   37                                                            
CONECT   75   38                                                            
CONECT   76   38                                                            
CONECT   77   38                                                            
MASTER        0    0    0    0    0    0    0    0   77    0  162    0
END

RDKit          3D

77 81  0  0  0  0  0  0  0  0999 V2000
    6.1412    4.9730   -0.3667 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8285    3.5242   -0.2224 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9307    2.5213   -0.2888 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5790    3.1746   -0.0413 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1742    1.7583    0.1122 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0648    0.8881    0.0671 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8294    1.4121    0.3016 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.2551    0.1475    0.4682 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9412   -0.0356    0.6335 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1750    0.9355    0.6890 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1590    0.7207   -0.4445 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4571    0.3927   -0.3508 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1004    0.1889    0.8933 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4285   -0.1656    1.1462 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2387   -0.3575    0.2260 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9187   -0.3252    2.5203 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1363   -0.6547    2.8117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5949   -0.8072    4.2389 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1451   -0.9044    1.7643 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0241    0.3567   -1.6819 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1965    0.4944   -2.4678 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.0425    1.7071   -2.1020 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6970    0.6927   -3.8713 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.9090    1.9036   -3.9367 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2431    0.6938   -3.8505 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9068    0.0683   -2.5323 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6372   -1.4112   -2.6656 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8046    0.7940   -1.8466 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1718    1.3265   -2.3600 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7085   -1.4822    0.7471 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2886   -2.0655    1.2271 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9223   -2.1226    0.1643 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8212   -2.3664   -1.2995 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2584   -3.3398    0.9820 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7601   -3.3227    0.9398 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3122   -3.9015    2.0685 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1365   -1.8552    0.8076 C   0  0  2  0  0  0  0  0  0  0  0  0
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    5.6740    5.2734   -1.3469 H   0  0  0  0  0  0  0  0  0  0  0  0
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    7.0426    1.9720    0.6692 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8175    1.8328   -1.1523 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8899    3.0575   -0.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7964    3.9061    0.0022 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.2394    1.9751    0.5595 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.5103    0.3189    1.7774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2183   -0.1561    3.3561 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2024   -1.7449    4.2648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2945    0.0326    4.4166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7608   -0.8432    4.9381 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8781   -1.7475    1.0773 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1343   -1.1938    2.1892 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3517   -0.0220    1.1269 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8374   -0.4214   -2.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4762    2.3051   -1.3708 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2029    2.2941   -2.9997 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0406    1.3879   -1.7358 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3342    0.4953   -4.7369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6274    0.4171   -4.7448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7047   -1.9556   -1.7264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6381   -1.5012   -3.1482 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3827   -1.7863   -3.4262 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1055   -1.4990   -1.8993 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3790   -3.2776   -1.6070 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7444   -2.5894   -1.5217 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8129   -4.2592    0.6081 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9697   -3.1063    2.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0766   -3.8765    0.0203 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5950   -4.1488    2.7192 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8133   -1.7433   -0.0545 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8656   -1.5476    2.0283 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4388   -2.1601    2.9515 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4443   -0.4546    2.4004 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  3
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
N-[(1AR,2S,6as,6BS)-5-{[(5S,6S,7as)-6-hydroxy-3-[(1-hydroxy-3-methylbut-2-en-1-ylidene)amino]-5,7a-dimethyl-1-oxo-5,6,7,7a-tetrahydro-1H-pyrrolizin-2-yl]methyl}-2,6a-dimethyl-6-oxo-1ah,2H,6H,6ah,6BH-oxireno[2,3-a]pyrrolizin-4-yl]-3-methylbut-2-enimidate	Generator

Chemical Formula

C₂₉H₃₈N₄O₆

Average Mass

538.6450 Da

Monoisotopic Mass

538.27913 Da

IUPAC Name

N-[(1aR,2S,6aS,6bS)-5-{[(5S,6S,7aS)-6-hydroxy-5,7a-dimethyl-3-(3-methylbut-2-enamido)-1-oxo-5,6,7,7a-tetrahydro-1H-pyrrolizin-2-yl]methyl}-2,6a-dimethyl-6-oxo-1aH,2H,6H,6aH,6bH-oxireno[2,3-a]pyrrolizin-4-yl]-3-methylbut-2-enamide

Traditional Name

N-[(1aR,2S,6aS,6bS)-5-{[(5S,6S,7aS)-6-hydroxy-5,7a-dimethyl-3-(3-methylbut-2-enamido)-1-oxo-6,7-dihydro-5H-pyrrolizin-2-yl]methyl}-2,6a-dimethyl-6-oxo-1aH,2H,6bH-oxireno[2,3-a]pyrrolizin-4-yl]-3-methylbut-2-enamide

CAS Registry Number

Not Available

SMILES

C[C@H]1[C@H]2O[C@H]2[C@]2(C)N1C(NC(=O)C=C(C)C)=C(CC1=C(NC(=O)C=C(C)C)N3[C@@H](C)[C@@H](O)C[C@@]3(C)C1=O)C2=O

InChI Identifier

InChI=1S/C29H38N4O6/c1-13(2)9-20(35)30-26-17(23(37)28(7)12-19(34)15(5)32(26)28)11-18-24(38)29(8)25-22(39-25)16(6)33(29)27(18)31-21(36)10-14(3)4/h9-10,15-16,19,22,25,34H,11-12H2,1-8H3,(H,30,35)(H,31,36)/t15-,16-,19-,22+,25+,28-,29+/m0/s1

InChI Key

MSVQLOHTXMXTGS-DRQMPHHESA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces	NPAtlas	29035560

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.82	ALOGPS
logP	2.99	ChemAxon
logS	-2.7	ALOGPS
pKa (Strongest Acidic)	13.2	ChemAxon
pKa (Strongest Basic)	-1.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	131.58 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	165.31 m³·mol⁻¹	ChemAxon
Polarizability	58.86 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

NPAtlas ID

NPA022482

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78439016

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139589827

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Jiang B, Zhao W, Li S, Liu H, Yu L, Zhang Y, He H, Wu L: Cytotoxic Dibohemamines D-F from a Streptomyces Species. J Nat Prod. 2017 Oct 27;80(10):2825-2829. doi: 10.1021/acs.jnatprod.7b00136. Epub 2017 Oct 16. [PubMed:29035560 ]

Showing NP-Card for Dibohemamine F (NP0017097)

MOL for NP0017097 (Dibohemamine F)

3D MOL for NP0017097 (Dibohemamine F)

3D SDF for NP0017097 (Dibohemamine F)

3D-SDF for NP0017097 (Dibohemamine F)

PDB for NP0017097 (Dibohemamine F)

3D PDB for NP0017097 (Dibohemamine F)

SMILES for NP0017097 (Dibohemamine F)

INCHI for NP0017097 (Dibohemamine F)

Structure for NP0017097 (Dibohemamine F)

3D Structure for NP0017097 (Dibohemamine F)