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Record Information
Version2.0
Created at2021-01-06 01:13:18 UTC
Updated at2021-07-15 17:21:57 UTC
NP-MRD IDNP0016166
Secondary Accession NumbersNone
Natural Product Identification
Common NameFistularin-3
Provided ByNPAtlasNPAtlas Logo
Description Fistularin-3 is found in Aplysina caissara, Pseudovibrio, Pseudovibrio denitrificans and Verongia aerophobia. Fistularin-3 was first documented in 2009 (PMID: 19588186). Based on a literature review very few articles have been published on Isofistularin-3 (PMID: 28191971) (PMID: 32228987) (PMID: 29783778) (PMID: 27006469) (PMID: 22690137) (PMID: 22363236).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC31H30Br6N4O11
Average Mass1114.0220 Da
Monoisotopic Mass1107.70114 Da
IUPAC Name(5S,10R)-7,9-dibromo-N-[(2R)-3-{2,6-dibromo-4-[(1S)-2-{[(5S,10R)-7,9-dibromo-10-hydroxy-8-methoxy-1-oxa-2-azaspiro[4.5]deca-2,6,8-trien-3-yl]formamido}-1-hydroxyethyl]phenoxy}-2-hydroxypropyl]-10-hydroxy-8-methoxy-1-oxa-2-azaspiro[4.5]deca-2,6,8-triene-3-carboxamide
Traditional Name(5S,10R)-7,9-dibromo-N-[(2R)-3-{2,6-dibromo-4-[(1S)-2-{[(5S,10R)-7,9-dibromo-10-hydroxy-8-methoxy-1-oxa-2-azaspiro[4.5]deca-2,6,8-trien-3-yl]formamido}-1-hydroxyethyl]phenoxy}-2-hydroxypropyl]-10-hydroxy-8-methoxy-1-oxa-2-azaspiro[4.5]deca-2,6,8-triene-3-carboxamide
CAS Registry NumberNot Available
SMILES
COC1=C(Br)[C@H](O)[C@]2(CC(=NO2)C(=O)NCC(O)COC2=C(Br)C=C(C=C2Br)C(O)CNC(=O)C2=NO[C@@]3(C2)C=C(Br)C(OC)=C(Br)[C@@H]3O)C=C1Br
InChI Identifier
InChI=1S/C31H30Br6N4O11/c1-48-24-16(34)5-30(26(44)21(24)36)7-18(40-51-30)28(46)38-9-13(42)11-50-23-14(32)3-12(4-15(23)33)20(43)10-39-29(47)19-8-31(52-41-19)6-17(35)25(49-2)22(37)27(31)45/h3-6,13,20,26-27,42-45H,7-11H2,1-2H3,(H,38,46)(H,39,47)/t13?,20?,26-,27-,30+,31+/m0/s1
InChI KeyTURTULDFIIAPTC-CJQKJACMSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Aplysina caissaraAnimalia
PseudovibrioNPAtlas
Pseudovibrio denitrificansLOTUS Database
Verongia aerophobia-
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.2ALOGPS
logP2.25ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)11.58ChemAxon
pKa (Strongest Basic)-0.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count13ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area209.99 ŲChemAxon
Rotatable Bond Count12ChemAxon
Refractivity210.39 m³·mol⁻¹ChemAxon
Polarizability85.67 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA022172
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID139890
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound159041
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Nicacio KJ, Ioca LP, Froes AM, Leomil L, Appolinario LR, Thompson CC, Thompson FL, Ferreira AG, Williams DE, Andersen RJ, Eustaquio AS, Berlinck RG: Cultures of the Marine Bacterium Pseudovibrio denitrificans Ab134 Produce Bromotyrosine-Derived Alkaloids Previously Only Isolated from Marine Sponges. J Nat Prod. 2017 Feb 24;80(2):235-240. doi: 10.1021/acs.jnatprod.6b00838. Epub 2017 Feb 13. [PubMed:28191971 ]
  2. Binnewerg B, Schubert M, Voronkina A, Muzychka L, Wysokowski M, Petrenko I, Djurovic M, Kovalchuk V, Tsurkan M, Martinovic R, Bechmann N, Fursov A, Ivanenko VN, Tabachnick KR, Smolii OB, Joseph Y, Giovine M, Bornstein SR, Stelling AL, Tunger A, Schmitz M, Taniya OS, Kovalev IS, Zyryanov GV, Guan K, Ehrlich H: Marine biomaterials: Biomimetic and pharmacological potential of cultivated Aplysina aerophoba marine demosponge. Mater Sci Eng C Mater Biol Appl. 2020 Apr;109:110566. doi: 10.1016/j.msec.2019.110566. Epub 2019 Dec 17. [PubMed:32228987 ]
  3. Bechmann N, Ehrlich H, Eisenhofer G, Ehrlich A, Meschke S, Ziegler CG, Bornstein SR: Anti-Tumorigenic and Anti-Metastatic Activity of the Sponge-Derived Marine Drugs Aeroplysinin-1 and Isofistularin-3 against Pheochromocytoma In Vitro. Mar Drugs. 2018 May 20;16(5). pii: md16050172. doi: 10.3390/md16050172. [PubMed:29783778 ]
  4. Florean C, Schnekenburger M, Lee JY, Kim KR, Mazumder A, Song S, Kim JM, Grandjenette C, Kim JG, Yoon AY, Dicato M, Kim KW, Christov C, Han BW, Proksch P, Diederich M: Discovery and characterization of Isofistularin-3, a marine brominated alkaloid, as a new DNA demethylating agent inducing cell cycle arrest and sensitization to TRAIL in cancer cells. Oncotarget. 2016 Apr 26;7(17):24027-49. doi: 10.18632/oncotarget.8210. [PubMed:27006469 ]
  5. Sacristan-Soriano O, Banaigs B, Becerro MA: Temporal trends in the secondary metabolite production of the sponge Aplysina aerophoba. Mar Drugs. 2012 Apr;10(4):677-93. doi: 10.3390/md10040677. Epub 2012 Mar 23. [PubMed:22690137 ]
  6. Sacristan-Soriano O, Banaigs B, Becerro MA: Relevant spatial scales of chemical variation in Aplysina aerophoba. Mar Drugs. 2011 Dec;9(12):2499-513. doi: 10.3390/md9122499. Epub 2011 Nov 28. [PubMed:22363236 ]
  7. Sacristan-Soriano O, Banaigs B, Casamayor EO, Becerro MA: Exploring the links between natural products and bacterial assemblages in the sponge Aplysina aerophoba. Appl Environ Microbiol. 2011 Feb;77(3):862-70. doi: 10.1128/AEM.00100-10. Epub 2010 Nov 29. [PubMed:21115701 ]
  8. Gerce B, Schwartz T, Voigt M, Ruhle S, Kirchen S, Putz A, Proksch P, Obst U, Syldatk C, Hausmann R: Morphological, bacterial, and secondary metabolite changes of Aplysina aerophoba upon long-term maintenance under artificial conditions. Microb Ecol. 2009 Nov;58(4):865-78. doi: 10.1007/s00248-009-9560-6. Epub 2009 Jul 9. [PubMed:19588186 ]
  9. Putz A, Kloeppel A, Pfannkuchen M, Brummer F, Proksch P: Depth-related alkaloid variation in Mediterranean Aplysina sponges. Z Naturforsch C J Biosci. 2009 Mar-Apr;64(3-4):279-87. doi: 10.1515/znc-2009-3-421. [PubMed:19526725 ]