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Record Information
Version2.0
Created at2021-01-06 01:12:03 UTC
Updated at2024-09-12 19:50:37 UTC
NP-MRD IDNP0016137
Secondary Accession NumbersNone
Natural Product Identification
Common Name3-amino-27-demethoxy-27-hydroxyrifamycin S
Provided ByNPAtlasNPAtlas Logo
Description3-Amino-27-demethoxy-27-hydroxyrifamycin S belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. 3-amino-27-demethoxy-27-hydroxyrifamycin S is found in Micromonospora sp. Based on a literature review very few articles have been published on 3-amino-27-demethoxy-27-hydroxyrifamycin S.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC36H44N2O12
Average Mass696.7500 Da
Monoisotopic Mass696.28942 Da
IUPAC Name(7S,9E,11S,12R,13R,14R,15R,16R,17S,18S,19E,21Z)-26-amino-2,11,15,17-tetrahydroxy-3,7,12,14,16,18,22-heptamethyl-6,23,27,29-tetraoxo-8,30-dioxa-24-azatetracyclo[23.3.1.1^{4,7}.0^{5,28}]triaconta-1,3,5(28),9,19,21,25-heptaen-13-yl acetate
Traditional Name(7S,9E,11S,12R,13R,14R,15R,16R,17S,18S,19E,21Z)-26-amino-2,11,15,17-tetrahydroxy-3,7,12,14,16,18,22-heptamethyl-6,23,27,29-tetraoxo-8,30-dioxa-24-azatetracyclo[23.3.1.1^{4,7}.0^{5,28}]triaconta-1,3,5(28),9,19,21,25-heptaen-13-yl acetate
CAS Registry NumberNot Available
SMILES
[H]OC1=C2C(=O)C3=C(N([H])[H])C(=O)C2=C2C(O[C@](O\C([H])=C([H])\[C@]([H])(O[H])[C@@]([H])(C([H])([H])[H])[C@@]([H])(OC(=O)C([H])([H])[H])[C@]([H])(C([H])([H])[H])[C@]([H])(O[H])[C@]([H])(C([H])([H])[H])[C@@]([H])(O[H])[C@]([H])(\C([H])=C(/[H])\C(\[H])=C(/C(=O)N3[H])C([H])([H])[H])C([H])([H])[H])(C2=O)C([H])([H])[H])=C1C([H])([H])[H]
InChI Identifier
InChI=1/C36H44N2O12/c1-14-10-9-11-15(2)35(47)38-26-25(37)30(44)22-23(31(26)45)29(43)19(6)33-24(22)34(46)36(8,50-33)48-13-12-21(40)16(3)32(49-20(7)39)18(5)28(42)17(4)27(14)41/h9-14,16-18,21,27-28,32,40-43H,37H2,1-8H3,(H,38,47)/b10-9+,13-12+,15-11-/t14-,16+,17+,18+,21-,27-,28+,32+,36-/s2
InChI KeyDKGDRGZLHOWDIK-ORRSAJCFNA-N
Experimental Spectra
Not Available
Predicted Spectra
Not Available
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Micromonospora sp.NPAtlas
Chemical Taxonomy
DescriptionThis compound belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentSesquiterpenoids
Alternative Parents
Substituents
  • Farsesane sesquiterpenoid
  • Sesquiterpenoid
  • Naphthofuran
  • Naphthoquinone
  • Naphthalene
  • Coumaran
  • Benzofuran
  • Aryl alkyl ketone
  • Aryl ketone
  • Quinone
  • Alpha-branched alpha,beta-unsaturated-ketone
  • Benzenoid
  • N-acyl-amine
  • Vinylogous amide
  • Vinylogous acid
  • Alpha,beta-unsaturated ketone
  • Enone
  • Acryloyl-group
  • Secondary alcohol
  • Lactam
  • Ketone
  • Carboxylic acid ester
  • Carboxamide group
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Primary aliphatic amine
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.59ChemAxon
pKa (Strongest Acidic)6.78ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count6ChemAxon
Polar Surface Area232.01 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity184.59 m³·mol⁻¹ChemAxon
Polarizability72.36 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA023818
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References