NP-MRD: Showing NP-Card for Culpin (NP0016072)

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Record Information

Version

2.0

Created at

2021-01-06 01:09:16 UTC

Updated at

2021-07-15 17:21:42 UTC

NP-MRD ID

NP0016072

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Culpin

Provided By

NPAtlas

Description

Culpin is found in Preussia. Culpin was first documented in 1989 (PMID: 2808138). Based on a literature review very few articles have been published on Culpin.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242117263D          

 36 36  0  0  0  0            999 V2000
    6.2957    1.1042   -0.2049 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5610    0.0306   -0.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102   -1.1997   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1474   -0.0096   -0.1343 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9564   -0.0343    0.1059 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5500   -0.0396    0.4005 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.7540   -0.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6817   -0.7660   -0.1111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5043   -1.5025   -0.9392 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2236   -0.0778    0.9437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6881   -0.0703    1.2659 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4517    0.8133    0.3396 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4662    0.3504   -0.3569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8876   -1.0626   -0.2454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1900    1.2780   -1.2667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3360    0.6501    1.7460 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0123    0.6546    1.4627 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8496    1.3938    2.2909 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9112    2.0403    0.1598 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3493    1.0674   -0.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5569   -1.7679   -1.5966 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1896   -0.9475   -1.3468 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4288   -1.8886   -0.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1049   -1.2986   -1.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1539   -2.0194   -1.7182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8394    0.3605    2.2903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0980   -1.0778    1.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1670    1.8631    0.2342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0534   -1.3137    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1979   -1.7352   -0.7489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9134   -1.1553   -0.6929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1366    2.3353   -0.9167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6827    1.2040   -2.2665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2227    0.9323   -1.4073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7662    1.1908    2.5753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8468    1.4514    2.1550 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  3  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  3  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 17  6  1  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  3 21  1  0  0  0  0
  3 22  1  0  0  0  0
  3 23  1  0  0  0  0
  7 24  1  0  0  0  0
  9 25  1  0  0  0  0
 11 26  1  0  0  0  0
 11 27  1  0  0  0  0
 12 28  1  0  0  0  0
 14 29  1  0  0  0  0
 14 30  1  0  0  0  0
 14 31  1  0  0  0  0
 15 32  1  0  0  0  0
 15 33  1  0  0  0  0
 15 34  1  0  0  0  0
 16 35  1  0  0  0  0
 18 36  1  0  0  0  0
M  END

     RDKit          3D

 36 36  0  0  0  0  0  0  0  0999 V2000
    6.2957    1.1042   -0.2049 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5610    0.0306   -0.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102   -1.1997   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1474   -0.0096   -0.1343 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9564   -0.0343    0.1059 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5500   -0.0396    0.4005 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.7540   -0.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6817   -0.7660   -0.1111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5043   -1.5025   -0.9392 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2236   -0.0778    0.9437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6881   -0.0703    1.2659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4517    0.8133    0.3396 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4662    0.3504   -0.3569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8876   -1.0626   -0.2454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1900    1.2780   -1.2667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3360    0.6501    1.7460 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0123    0.6546    1.4627 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8496    1.3938    2.2909 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9112    2.0403    0.1598 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3493    1.0674   -0.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5569   -1.7679   -1.5966 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1896   -0.9475   -1.3468 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4288   -1.8886   -0.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1049   -1.2986   -1.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1539   -2.0194   -1.7182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8394    0.3605    2.2903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0980   -1.0778    1.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1670    1.8631    0.2342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0534   -1.3137    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1979   -1.7352   -0.7489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9134   -1.1553   -0.6929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1366    2.3353   -0.9167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6827    1.2040   -2.2665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2227    0.9323   -1.4073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7662    1.1908    2.5753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8468    1.4514    2.1550 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  3  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  8 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  3
 13 14  1  0
 13 15  1  0
 10 16  1  0
 16 17  2  0
 17 18  1  0
 17  6  1  0
  1 19  1  0
  1 20  1  0
  3 21  1  0
  3 22  1  0
  3 23  1  0
  7 24  1  0
  9 25  1  0
 11 26  1  0
 11 27  1  0
 12 28  1  0
 14 29  1  0
 14 30  1  0
 14 31  1  0
 15 32  1  0
 15 33  1  0
 15 34  1  0
 16 35  1  0
 18 36  1  0
M  END


  Mrv1652306242117263D          

 36 36  0  0  0  0            999 V2000
    6.2957    1.1042   -0.2049 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5610    0.0306   -0.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102   -1.1997   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1474   -0.0096   -0.1343 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9564   -0.0343    0.1059 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5500   -0.0396    0.4005 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.7540   -0.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6817   -0.7660   -0.1111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5043   -1.5025   -0.9392 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2236   -0.0778    0.9437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6881   -0.0703    1.2659 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4517    0.8133    0.3396 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4662    0.3504   -0.3569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8876   -1.0626   -0.2454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1900    1.2780   -1.2667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3360    0.6501    1.7460 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0123    0.6546    1.4627 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8496    1.3938    2.2909 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9112    2.0403    0.1598 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3493    1.0674   -0.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5569   -1.7679   -1.5966 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1896   -0.9475   -1.3468 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4288   -1.8886   -0.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1049   -1.2986   -1.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1539   -2.0194   -1.7182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8394    0.3605    2.2903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0980   -1.0778    1.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1670    1.8631    0.2342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0534   -1.3137    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1979   -1.7352   -0.7489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9134   -1.1553   -0.6929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1366    2.3353   -0.9167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6827    1.2040   -2.2665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2227    0.9323   -1.4073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7662    1.1908    2.5753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8468    1.4514    2.1550 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  3  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  3  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 10 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 17  6  1  0  0  0  0
  1 19  1  0  0  0  0
  1 20  1  0  0  0  0
  3 21  1  0  0  0  0
  3 22  1  0  0  0  0
  3 23  1  0  0  0  0
  7 24  1  0  0  0  0
  9 25  1  0  0  0  0
 11 26  1  0  0  0  0
 11 27  1  0  0  0  0
 12 28  1  0  0  0  0
 14 29  1  0  0  0  0
 14 30  1  0  0  0  0
 14 31  1  0  0  0  0
 15 32  1  0  0  0  0
 15 33  1  0  0  0  0
 15 34  1  0  0  0  0
 16 35  1  0  0  0  0
 18 36  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0016072

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C([H])C(=C(O[H])C([H])=C1C#CC(=C([H])[H])C([H])([H])[H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C16H18O2/c1-11(2)5-7-13-9-16(18)14(10-15(13)17)8-6-12(3)4/h6,9-10,17-18H,1,8H2,2-4H3

> <INCHI_KEY>
QMYWKFZKRYCUMA-UHFFFAOYSA-N

> <FORMULA>
C16H18O2

> <MOLECULAR_WEIGHT>
242.318

> <EXACT_MASS>
242.13067982

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
36

> <JCHEM_AVERAGE_POLARIZABILITY>
28.845206070660527

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-(3-methylbut-2-en-1-yl)-5-(3-methylbut-3-en-1-yn-1-yl)benzene-1,4-diol

> <ALOGPS_LOGP>
3.86

> <JCHEM_LOGP>
4.465889506333332

> <ALOGPS_LOGS>
-4.15

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
11.007202169061292

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.160243726318887

> <JCHEM_PKA_STRONGEST_BASIC>
-5.967299484481079

> <JCHEM_POLAR_SURFACE_AREA>
40.46

> <JCHEM_REFRACTIVITY>
73.8628

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.72e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-(3-methylbut-2-en-1-yl)-5-(3-methylbut-3-en-1-yn-1-yl)benzene-1,4-diol

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 36 36  0  0  0  0  0  0  0  0999 V2000
    6.2957    1.1042   -0.2049 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5610    0.0306   -0.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102   -1.1997   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1474   -0.0096   -0.1343 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9564   -0.0343    0.1059 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5500   -0.0396    0.4005 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.7540   -0.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6817   -0.7660   -0.1111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5043   -1.5025   -0.9392 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2236   -0.0778    0.9437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6881   -0.0703    1.2659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4517    0.8133    0.3396 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4662    0.3504   -0.3569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8876   -1.0626   -0.2454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1900    1.2780   -1.2667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3360    0.6501    1.7460 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0123    0.6546    1.4627 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8496    1.3938    2.2909 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9112    2.0403    0.1598 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3493    1.0674   -0.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5569   -1.7679   -1.5966 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1896   -0.9475   -1.3468 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4288   -1.8886   -0.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1049   -1.2986   -1.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1539   -2.0194   -1.7182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8394    0.3605    2.2903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0980   -1.0778    1.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1670    1.8631    0.2342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0534   -1.3137    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1979   -1.7352   -0.7489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9134   -1.1553   -0.6929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1366    2.3353   -0.9167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6827    1.2040   -2.2665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2227    0.9323   -1.4073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7662    1.1908    2.5753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8468    1.4514    2.1550 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  3  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  8 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  3
 13 14  1  0
 13 15  1  0
 10 16  1  0
 16 17  2  0
 17 18  1  0
 17  6  1  0
  1 19  1  0
  1 20  1  0
  3 21  1  0
  3 22  1  0
  3 23  1  0
  7 24  1  0
  9 25  1  0
 11 26  1  0
 11 27  1  0
 12 28  1  0
 14 29  1  0
 14 30  1  0
 14 31  1  0
 15 32  1  0
 15 33  1  0
 15 34  1  0
 16 35  1  0
 18 36  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       6.296   1.104  -0.205  0.00  0.00           C+0
HETATM    2  C   UNK     0       5.561   0.031  -0.396  0.00  0.00           C+0
HETATM    3  C   UNK     0       6.210  -1.200  -0.903  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.147  -0.010  -0.134  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.956  -0.034   0.106  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.550  -0.040   0.401  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.690  -0.754  -0.390  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.682  -0.766  -0.111  0.00  0.00           C+0
HETATM    9  O   UNK     0      -1.504  -1.502  -0.939  0.00  0.00           O+0
HETATM   10  C   UNK     0      -1.224  -0.078   0.944  0.00  0.00           C+0
HETATM   11  C   UNK     0      -2.688  -0.070   1.266  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.452   0.813   0.340  0.00  0.00           C+0
HETATM   13  C   UNK     0      -4.466   0.350  -0.357  0.00  0.00           C+0
HETATM   14  C   UNK     0      -4.888  -1.063  -0.245  0.00  0.00           C+0
HETATM   15  C   UNK     0      -5.190   1.278  -1.267  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.336   0.650   1.746  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.012   0.655   1.463  0.00  0.00           C+0
HETATM   18  O   UNK     0       1.850   1.394   2.291  0.00  0.00           O+0
HETATM   19  H   UNK     0       5.911   2.040   0.160  0.00  0.00           H+0
HETATM   20  H   UNK     0       7.349   1.067  -0.421  0.00  0.00           H+0
HETATM   21  H   UNK     0       5.557  -1.768  -1.597  0.00  0.00           H+0
HETATM   22  H   UNK     0       7.190  -0.948  -1.347  0.00  0.00           H+0
HETATM   23  H   UNK     0       6.429  -1.889  -0.036  0.00  0.00           H+0
HETATM   24  H   UNK     0       1.105  -1.299  -1.221  0.00  0.00           H+0
HETATM   25  H   UNK     0      -1.154  -2.019  -1.718  0.00  0.00           H+0
HETATM   26  H   UNK     0      -2.839   0.361   2.290  0.00  0.00           H+0
HETATM   27  H   UNK     0      -3.098  -1.078   1.300  0.00  0.00           H+0
HETATM   28  H   UNK     0      -3.167   1.863   0.234  0.00  0.00           H+0
HETATM   29  H   UNK     0      -5.053  -1.314   0.836  0.00  0.00           H+0
HETATM   30  H   UNK     0      -4.198  -1.735  -0.749  0.00  0.00           H+0
HETATM   31  H   UNK     0      -5.913  -1.155  -0.693  0.00  0.00           H+0
HETATM   32  H   UNK     0      -5.137   2.335  -0.917  0.00  0.00           H+0
HETATM   33  H   UNK     0      -4.683   1.204  -2.267  0.00  0.00           H+0
HETATM   34  H   UNK     0      -6.223   0.932  -1.407  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.766   1.191   2.575  0.00  0.00           H+0
HETATM   36  H   UNK     0       2.847   1.451   2.155  0.00  0.00           H+0
CONECT    1    2   19   20                                                  
CONECT    2    1    3    4                                                  
CONECT    3    2   21   22   23                                             
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7   17                                                  
CONECT    7    6    8   24                                                  
CONECT    8    7    9   10                                                  
CONECT    9    8   25                                                       
CONECT   10    8   11   16                                                  
CONECT   11   10   12   26   27                                             
CONECT   12   11   13   28                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13   29   30   31                                             
CONECT   15   13   32   33   34                                             
CONECT   16   10   17   35                                                  
CONECT   17   16   18    6                                                  
CONECT   18   17   36                                                       
CONECT   19    1                                                            
CONECT   20    1                                                            
CONECT   21    3                                                            
CONECT   22    3                                                            
CONECT   23    3                                                            
CONECT   24    7                                                            
CONECT   25    9                                                            
CONECT   26   11                                                            
CONECT   27   11                                                            
CONECT   28   12                                                            
CONECT   29   14                                                            
CONECT   30   14                                                            
CONECT   31   14                                                            
CONECT   32   15                                                            
CONECT   33   15                                                            
CONECT   34   15                                                            
CONECT   35   16                                                            
CONECT   36   18                                                            
MASTER        0    0    0    0    0    0    0    0   36    0   72    0
END

RDKit          3D

36 36  0  0  0  0  0  0  0  0999 V2000
    6.2957    1.1042   -0.2049 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5610    0.0306   -0.3957 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2102   -1.1997   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1474   -0.0096   -0.1343 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9564   -0.0343    0.1059 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5500   -0.0396    0.4005 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.7540   -0.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6817   -0.7660   -0.1111 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5043   -1.5025   -0.9392 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2236   -0.0778    0.9437 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6881   -0.0703    1.2659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4517    0.8133    0.3396 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4662    0.3504   -0.3569 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8876   -1.0626   -0.2454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1900    1.2780   -1.2667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3360    0.6501    1.7460 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0123    0.6546    1.4627 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8496    1.3938    2.2909 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9112    2.0403    0.1598 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.3493    1.0674   -0.4206 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5569   -1.7679   -1.5966 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1896   -0.9475   -1.3468 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4288   -1.8886   -0.0363 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1049   -1.2986   -1.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1539   -2.0194   -1.7182 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8394    0.3605    2.2903 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0980   -1.0778    1.2998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1670    1.8631    0.2342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0534   -1.3137    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1979   -1.7352   -0.7489 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9134   -1.1553   -0.6929 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1366    2.3353   -0.9167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6827    1.2040   -2.2665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2227    0.9323   -1.4073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7662    1.1908    2.5753 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8468    1.4514    2.1550 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  3
  2  3  1  0
  2  4  1  0
  4  5  3  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  8 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  3
 13 14  1  0
 13 15  1  0
 10 16  1  0
 16 17  2  0
 17 18  1  0
 17  6  1  0
  1 19  1  0
  1 20  1  0
  3 21  1  0
  3 22  1  0
  3 23  1  0
  7 24  1  0
  9 25  1  0
 11 26  1  0
 11 27  1  0
 12 28  1  0
 14 29  1  0
 14 30  1  0
 14 31  1  0
 15 32  1  0
 15 33  1  0
 15 34  1  0
 16 35  1  0
 18 36  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
2-(3-Methyl-2-butenyl)-5-(3-methyl-3-buten-1-ynyl)-1,4-benzenediol	MeSH

Chemical Formula

C₁₆H₁₈O₂

Average Mass

242.3180 Da

Monoisotopic Mass

242.13068 Da

IUPAC Name

2-(3-methylbut-2-en-1-yl)-5-(3-methylbut-3-en-1-yn-1-yl)benzene-1,4-diol

Traditional Name

2-(3-methylbut-2-en-1-yl)-5-(3-methylbut-3-en-1-yn-1-yl)benzene-1,4-diol

CAS Registry Number

Not Available

SMILES

CC(C)=CCC1=C(O)C=C(C#CC(C)=C)C(O)=C1

InChI Identifier

InChI=1S/C16H18O2/c1-11(2)5-7-13-9-16(18)14(10-15(13)17)8-6-12(3)4/h6,9-10,17-18H,1,8H2,2-4H3

InChI Key

QMYWKFZKRYCUMA-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Preussia	NPAtlas	2808138

Species Where Detected

Species Name	Source	Reference
Preussia sp.	KNApSAcK Database	22123792

Chemical Taxonomy

Description

This compound belongs to the class of organic compounds known as prenylated hydroquinones. These are quinones with a structure characterized by the hydroquinone ring substituted by an prenyl side-chain.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Quinone and hydroquinone lipids

Direct Parent

Prenylated hydroquinones

Alternative Parents

Substituents

Prenylbenzoquinol
Hydroquinone
1-hydroxy-2-unsubstituted benzenoid
Phenol
Benzenoid
Monocyclic benzene moiety
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.86	ALOGPS
logP	4.47	ChemAxon
logS	-4.2	ALOGPS
pKa (Strongest Acidic)	9.16	ChemAxon
pKa (Strongest Basic)	-6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	40.46 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	73.86 m³·mol⁻¹	ChemAxon
Polarizability	28.85 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA020715

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00017532

Chemspider ID

115369

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Culpin

METLIN ID

Not Available

PubChem Compound

130393

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Johnson JH, Meyers E, O'Sullivan J, Phillipson DW, Robinson G, Trejo WH, Wells JS: Culpin, a novel hydroquinone antibiotic of fungal origin. J Antibiot (Tokyo). 1989 Oct;42(10):1515-7. doi: 10.7164/antibiotics.42.1515. [PubMed:2808138 ]

Showing NP-Card for Culpin (NP0016072)

MOL for NP0016072 (Culpin)

3D MOL for NP0016072 (Culpin)

3D SDF for NP0016072 (Culpin)

3D-SDF for NP0016072 (Culpin)

PDB for NP0016072 (Culpin)

3D PDB for NP0016072 (Culpin)

SMILES for NP0016072 (Culpin)

INCHI for NP0016072 (Culpin)

Structure for NP0016072 (Culpin)

3D Structure for NP0016072 (Culpin)