NP-MRD: Showing NP-Card for Spiroapplanatumine B (NP0015977)

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Record Information

Version

2.0

Created at

2021-01-06 01:05:11 UTC

Updated at

2021-07-15 17:21:27 UTC

NP-MRD ID

NP0015977

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Spiroapplanatumine B

Provided By

NPAtlas

Description

Spiroapplanatumine B is found in Ganoderma applanatum. It was first documented in 2012 (PMID: 34383397). Based on a literature review very few articles have been published on (2R,7'R)-5-hydroxy-3-oxo-3H-spiro[1-benzofuran-2,1'-cycloheptan]-3'-ene-3',7'-dicarboxylic acid (PMID: 27996259) (PMID: 34383398) (PMID: 34383396) (PMID: 34384147).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242117253D          

 37 39  0  0  0  0            999 V2000
   -3.1080    3.3474    0.6132 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1906    2.5461    0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2109    3.0158    1.8113 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1306    1.1781    0.4707 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1231    0.8677   -0.3400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4419   -0.4023   -1.0454 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1448   -0.7974   -1.7627 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2639   -1.4285   -0.7439 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4058   -2.4386   -1.4546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4942   -2.6390   -2.6920 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -3.1865   -0.7519 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3377   -0.5007   -0.0239 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0122    0.4040    0.9583 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5383   -1.3150    0.7346 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7560   -0.6854    0.8294 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8394   -0.8382    1.7089 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9470   -0.0411    1.5446 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0524    0.9102    0.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1976    1.6894    0.4324 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9949    1.0683   -0.3162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8608    0.2564   -0.1526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6105    0.2064   -0.9134 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4798    0.6862   -2.0558 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2920    2.9315    2.8305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8152    1.6730   -0.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2017   -0.2158   -1.8254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8003   -1.1872   -0.3772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3997   -1.4975   -2.6053 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7722    0.1135   -2.2280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8639   -1.9631   -0.0011 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3043   -4.0379   -0.2478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3794   -0.2393    1.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2482    1.0562    1.3938 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7427   -1.5874    2.4814 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7899   -0.1457    2.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9916    1.3929   -0.1501 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0118    1.8034   -1.1251 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
  8 12  1  0  0  0  0
 12 13  1  0  0  0  0
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 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
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  3 24  1  0  0  0  0
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  8 30  1  1  0  0  0
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 16 34  1  0  0  0  0
 17 35  1  0  0  0  0
 19 36  1  0  0  0  0
 20 37  1  0  0  0  0
M  END

     RDKit          3D

 37 39  0  0  0  0  0  0  0  0999 V2000
   -3.1080    3.3474    0.6132 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1906    2.5461    0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2109    3.0158    1.8113 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1306    1.1781    0.4707 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1231    0.8677   -0.3400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4419   -0.4023   -1.0454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1448   -0.7974   -1.7627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2639   -1.4285   -0.7439 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4058   -2.4386   -1.4546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4942   -2.6390   -2.6920 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -3.1865   -0.7519 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3377   -0.5007   -0.0239 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0122    0.4040    0.9583 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5383   -1.3150    0.7346 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7560   -0.6854    0.8294 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8394   -0.8382    1.7089 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9470   -0.0411    1.5446 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0524    0.9102    0.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1976    1.6894    0.4324 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9949    1.0683   -0.3162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8608    0.2564   -0.1526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6105    0.2064   -0.9134 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4798    0.6862   -2.0558 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2920    2.9315    2.8305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8152    1.6730   -0.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2017   -0.2158   -1.8254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8003   -1.1872   -0.3772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3997   -1.4975   -2.6053 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.8639   -1.9631   -0.0011 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3043   -4.0379   -0.2478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3794   -0.2393    1.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2482    1.0562    1.3938 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7427   -1.5874    2.4814 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7899   -0.1457    2.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9916    1.3929   -0.1501 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0118    1.8034   -1.1251 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
  8 12  1  0
 12 13  1  0
 12 14  1  1
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 18 20  1  0
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 13  4  1  0
 21 15  1  0
 22 12  1  0
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  8 30  1  1
 11 31  1  0
 13 32  1  0
 13 33  1  0
 16 34  1  0
 17 35  1  0
 19 36  1  0
 20 37  1  0
M  END


  Mrv1652306242117253D          

 37 39  0  0  0  0            999 V2000
   -3.1080    3.3474    0.6132 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1906    2.5461    0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2109    3.0158    1.8113 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1306    1.1781    0.4707 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1231    0.8677   -0.3400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4419   -0.4023   -1.0454 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1448   -0.7974   -1.7627 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2639   -1.4285   -0.7439 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4058   -2.4386   -1.4546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4942   -2.6390   -2.6920 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -3.1865   -0.7519 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3377   -0.5007   -0.0239 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0122    0.4040    0.9583 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5383   -1.3150    0.7346 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7560   -0.6854    0.8294 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8394   -0.8382    1.7089 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.0524    0.9102    0.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1976    1.6894    0.4324 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9949    1.0683   -0.3162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8608    0.2564   -0.1526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6105    0.2064   -0.9134 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4798    0.6862   -2.0558 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2920    2.9315    2.8305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8152    1.6730   -0.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2017   -0.2158   -1.8254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8003   -1.1872   -0.3772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3997   -1.4975   -2.6053 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.8639   -1.9631   -0.0011 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3043   -4.0379   -0.2478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3794   -0.2393    1.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2482    1.0562    1.3938 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7427   -1.5874    2.4814 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7899   -0.1457    2.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9916    1.3929   -0.1501 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0118    1.8034   -1.1251 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
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  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
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  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
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 22 23  2  0  0  0  0
 13  4  1  0  0  0  0
 21 15  1  0  0  0  0
 22 12  1  0  0  0  0
  3 24  1  0  0  0  0
  5 25  1  0  0  0  0
  6 26  1  0  0  0  0
  6 27  1  0  0  0  0
  7 28  1  0  0  0  0
  7 29  1  0  0  0  0
  8 30  1  1  0  0  0
 11 31  1  0  0  0  0
 13 32  1  0  0  0  0
 13 33  1  0  0  0  0
 16 34  1  0  0  0  0
 17 35  1  0  0  0  0
 19 36  1  0  0  0  0
 20 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0015977

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C1=C([H])C([H])([H])C([H])([H])[C@@]([H])(C(=O)O[H])[C@]2(OC3=C([H])C([H])=C(O[H])C([H])=C3C2=O)C1([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C16H14O7/c17-9-4-5-12-10(6-9)13(18)16(23-12)7-8(14(19)20)2-1-3-11(16)15(21)22/h2,4-6,11,17H,1,3,7H2,(H,19,20)(H,21,22)/t11-,16+/m0/s1

> <INCHI_KEY>
HNBGJFRBRDXXKU-MEDUHNTESA-N

> <FORMULA>
C16H14O7

> <MOLECULAR_WEIGHT>
318.281

> <EXACT_MASS>
318.073952791

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
37

> <JCHEM_AVERAGE_POLARIZABILITY>
30.033686271268923

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R,7'R)-5-hydroxy-3-oxo-3H-spiro[1-benzofuran-2,1'-cycloheptan]-3'-ene-3',7'-dicarboxylic acid

> <ALOGPS_LOGP>
1.30

> <JCHEM_LOGP>
1.6947563030000001

> <ALOGPS_LOGS>
-2.40

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-2

> <JCHEM_PKA>
3.9251567339614772

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.2400230288842193

> <JCHEM_PKA_STRONGEST_BASIC>
-4.952178074294834

> <JCHEM_POLAR_SURFACE_AREA>
121.13000000000001

> <JCHEM_REFRACTIVITY>
77.2025

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.27e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R,7'R)-5-hydroxy-3-oxospiro[1-benzofuran-2,1'-cycloheptan]-3'-ene-3',7'-dicarboxylic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 37 39  0  0  0  0  0  0  0  0999 V2000
   -3.1080    3.3474    0.6132 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1906    2.5461    0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2109    3.0158    1.8113 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1306    1.1781    0.4707 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1231    0.8677   -0.3400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4419   -0.4023   -1.0454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1448   -0.7974   -1.7627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2639   -1.4285   -0.7439 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4058   -2.4386   -1.4546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4942   -2.6390   -2.6920 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -3.1865   -0.7519 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3377   -0.5007   -0.0239 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0122    0.4040    0.9583 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5383   -1.3150    0.7346 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7560   -0.6854    0.8294 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8394   -0.8382    1.7089 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9470   -0.0411    1.5446 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0524    0.9102    0.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1976    1.6894    0.4324 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9949    1.0683   -0.3162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8608    0.2564   -0.1526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6105    0.2064   -0.9134 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4798    0.6862   -2.0558 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2920    2.9315    2.8305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8152    1.6730   -0.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2017   -0.2158   -1.8254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8003   -1.1872   -0.3772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3997   -1.4975   -2.6053 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7722    0.1135   -2.2280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8639   -1.9631   -0.0011 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3043   -4.0379   -0.2478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3794   -0.2393    1.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2482    1.0562    1.3938 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7427   -1.5874    2.4814 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7899   -0.1457    2.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9916    1.3929   -0.1501 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0118    1.8034   -1.1251 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
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  8 12  1  0
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 21 22  1  0
 22 23  2  0
 13  4  1  0
 21 15  1  0
 22 12  1  0
  3 24  1  0
  5 25  1  0
  6 26  1  0
  6 27  1  0
  7 28  1  0
  7 29  1  0
  8 30  1  1
 11 31  1  0
 13 32  1  0
 13 33  1  0
 16 34  1  0
 17 35  1  0
 19 36  1  0
 20 37  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  O   UNK     0      -3.108   3.347   0.613  0.00  0.00           O+0
HETATM    2  C   UNK     0      -2.191   2.546   0.949  0.00  0.00           C+0
HETATM    3  O   UNK     0      -1.211   3.016   1.811  0.00  0.00           O+0
HETATM    4  C   UNK     0      -2.131   1.178   0.471  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.123   0.868  -0.340  0.00  0.00           C+0
HETATM    6  C   UNK     0      -3.442  -0.402  -1.045  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.145  -0.797  -1.763  0.00  0.00           C+0
HETATM    8  C   UNK     0      -1.264  -1.429  -0.744  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.406  -2.439  -1.455  0.00  0.00           C+0
HETATM   10  O   UNK     0      -0.494  -2.639  -2.692  0.00  0.00           O+0
HETATM   11  O   UNK     0       0.519  -3.187  -0.752  0.00  0.00           O+0
HETATM   12  C   UNK     0      -0.338  -0.501  -0.024  0.00  0.00           C+0
HETATM   13  C   UNK     0      -1.012   0.404   0.958  0.00  0.00           C+0
HETATM   14  O   UNK     0       0.538  -1.315   0.735  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.756  -0.685   0.829  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.839  -0.838   1.709  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.947  -0.041   1.545  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.052   0.910   0.552  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.198   1.689   0.432  0.00  0.00           O+0
HETATM   20  C   UNK     0       2.995   1.068  -0.316  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.861   0.256  -0.153  0.00  0.00           C+0
HETATM   22  C   UNK     0       0.611   0.206  -0.913  0.00  0.00           C+0
HETATM   23  O   UNK     0       0.480   0.686  -2.056  0.00  0.00           O+0
HETATM   24  H   UNK     0      -1.292   2.932   2.830  0.00  0.00           H+0
HETATM   25  H   UNK     0      -3.815   1.673  -0.517  0.00  0.00           H+0
HETATM   26  H   UNK     0      -4.202  -0.216  -1.825  0.00  0.00           H+0
HETATM   27  H   UNK     0      -3.800  -1.187  -0.377  0.00  0.00           H+0
HETATM   28  H   UNK     0      -2.400  -1.498  -2.605  0.00  0.00           H+0
HETATM   29  H   UNK     0      -1.772   0.114  -2.228  0.00  0.00           H+0
HETATM   30  H   UNK     0      -1.864  -1.963  -0.001  0.00  0.00           H+0
HETATM   31  H   UNK     0       0.304  -4.038  -0.248  0.00  0.00           H+0
HETATM   32  H   UNK     0      -1.379  -0.239   1.806  0.00  0.00           H+0
HETATM   33  H   UNK     0      -0.248   1.056   1.394  0.00  0.00           H+0
HETATM   34  H   UNK     0       2.743  -1.587   2.481  0.00  0.00           H+0
HETATM   35  H   UNK     0       4.790  -0.146   2.213  0.00  0.00           H+0
HETATM   36  H   UNK     0       5.992   1.393  -0.150  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.012   1.803  -1.125  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2   24                                                       
CONECT    4    2    5   13                                                  
CONECT    5    4    6   25                                                  
CONECT    6    5    7   26   27                                             
CONECT    7    6    8   28   29                                             
CONECT    8    7    9   12   30                                             
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   31                                                       
CONECT   12    8   13   14   22                                             
CONECT   13   12    4   32   33                                             
CONECT   14   12   15                                                       
CONECT   15   14   16   21                                                  
CONECT   16   15   17   34                                                  
CONECT   17   16   18   35                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18   36                                                       
CONECT   20   18   21   37                                                  
CONECT   21   20   22   15                                                  
CONECT   22   21   23   12                                                  
CONECT   23   22                                                            
CONECT   24    3                                                            
CONECT   25    5                                                            
CONECT   26    6                                                            
CONECT   27    6                                                            
CONECT   28    7                                                            
CONECT   29    7                                                            
CONECT   30    8                                                            
CONECT   31   11                                                            
CONECT   32   13                                                            
CONECT   33   13                                                            
CONECT   34   16                                                            
CONECT   35   17                                                            
CONECT   36   19                                                            
CONECT   37   20                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   78    0
END

RDKit          3D

37 39  0  0  0  0  0  0  0  0999 V2000
   -3.1080    3.3474    0.6132 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1906    2.5461    0.9489 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2109    3.0158    1.8113 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1306    1.1781    0.4707 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1231    0.8677   -0.3400 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4419   -0.4023   -1.0454 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1448   -0.7974   -1.7627 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2639   -1.4285   -0.7439 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4058   -2.4386   -1.4546 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4942   -2.6390   -2.6920 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194   -3.1865   -0.7519 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3377   -0.5007   -0.0239 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.0122    0.4040    0.9583 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5383   -1.3150    0.7346 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7560   -0.6854    0.8294 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8394   -0.8382    1.7089 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9470   -0.0411    1.5446 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0524    0.9102    0.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1976    1.6894    0.4324 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9949    1.0683   -0.3162 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8608    0.2564   -0.1526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6105    0.2064   -0.9134 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4798    0.6862   -2.0558 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2920    2.9315    2.8305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8152    1.6730   -0.5169 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2017   -0.2158   -1.8254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8003   -1.1872   -0.3772 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3997   -1.4975   -2.6053 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7722    0.1135   -2.2280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8639   -1.9631   -0.0011 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3043   -4.0379   -0.2478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3794   -0.2393    1.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2482    1.0562    1.3938 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7427   -1.5874    2.4814 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7899   -0.1457    2.2129 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9916    1.3929   -0.1501 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0118    1.8034   -1.1251 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
  9 11  1  0
  8 12  1  0
 12 13  1  0
 12 14  1  1
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 18 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 13  4  1  0
 21 15  1  0
 22 12  1  0
  3 24  1  0
  5 25  1  0
  6 26  1  0
  6 27  1  0
  7 28  1  0
  7 29  1  0
  8 30  1  1
 11 31  1  0
 13 32  1  0
 13 33  1  0
 16 34  1  0
 17 35  1  0
 19 36  1  0
 20 37  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(2R,7'r)-5-Hydroxy-3-oxo-3H-spiro[1-benzofuran-2,1'-cycloheptan]-3'-ene-3',7'-dicarboxylate	Generator

Chemical Formula

C₁₆H₁₄O₇

Average Mass

318.2810 Da

Monoisotopic Mass

318.07395 Da

IUPAC Name

(2R,7'R)-5-hydroxy-3-oxo-3H-spiro[1-benzofuran-2,1'-cycloheptan]-3'-ene-3',7'-dicarboxylic acid

Traditional Name

(2R,7'R)-5-hydroxy-3-oxospiro[1-benzofuran-2,1'-cycloheptan]-3'-ene-3',7'-dicarboxylic acid

CAS Registry Number

Not Available

SMILES

OC(=O)[C@@H]1CCC=C(C[C@@]11OC2=C(C=C(O)C=C2)C1=O)C(O)=O

InChI Identifier

InChI=1S/C16H14O7/c17-9-4-5-12-10(6-9)13(18)16(23-12)7-8(14(19)20)2-1-3-11(16)15(21)22/h2,4-6,11,17H,1,3,7H2,(H,19,20)(H,21,22)/t11-,16+/m0/s1

InChI Key

HNBGJFRBRDXXKU-MEDUHNTESA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ganoderma applanatum	NPAtlas	27996259

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.3	ALOGPS
logP	1.69	ChemAxon
logS	-2.4	ALOGPS
pKa (Strongest Acidic)	3.24	ChemAxon
pKa (Strongest Basic)	-5	ChemAxon
Physiological Charge	-2	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	121.13 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	77.2 m³·mol⁻¹	ChemAxon
Polarizability	30.03 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA022133

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78441634

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

132962213

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Luo Q, Wei XY, Yang J, Luo JF, Liang R, Tu ZC, Cheng YX: Spiro Meroterpenoids from Ganoderma applanatum. J Nat Prod. 2017 Jan 27;80(1):61-70. doi: 10.1021/acs.jnatprod.6b00431. Epub 2016 Dec 20. [PubMed:27996259 ]
Mitchell PM: The cost-effectiveness of what in health and care?. 2021 Feb. [PubMed:34383398 ]
Authors unspecified: Ozanimod. 2012. [PubMed:34383397 ]
Authors unspecified: Ponesimod. 2012. [PubMed:34383396 ]
Lee J, Cho Y, Choi KH, Hwang I, Oh YL: Metastatic leiomyosarcoma of the thyroid gland: cytologic findings and differential diagnosis. J Pathol Transl Med. 2021 Aug 13. pii: jptm.2021.06.23. doi: 10.4132/jptm.2021.06.23. [PubMed:34384147 ]

Showing NP-Card for Spiroapplanatumine B (NP0015977)

MOL for NP0015977 (Spiroapplanatumine B)

3D MOL for NP0015977 (Spiroapplanatumine B)

3D SDF for NP0015977 (Spiroapplanatumine B)

3D-SDF for NP0015977 (Spiroapplanatumine B)

PDB for NP0015977 (Spiroapplanatumine B)

3D PDB for NP0015977 (Spiroapplanatumine B)

SMILES for NP0015977 (Spiroapplanatumine B)

INCHI for NP0015977 (Spiroapplanatumine B)

Structure for NP0015977 (Spiroapplanatumine B)

3D Structure for NP0015977 (Spiroapplanatumine B)