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Record Information
Version2.0
Created at2021-01-06 00:54:04 UTC
Updated at2021-07-15 17:20:41 UTC
NP-MRD IDNP0015703
Secondary Accession NumbersNone
Natural Product Identification
Common NameCoralmycin A
Provided ByNPAtlasNPAtlas Logo
Description Coralmycin A is found in Corallococcus and Corallococcus coralloides. Coralmycin A was first documented in 2021 (PMID: 34212970). Based on a literature review very few articles have been published on 2-hydroxy-4-{[hydroxy(2-hydroxy-4-{4-[(2R,3S)-2-[(4-{[hydroxy(4-nitrophenyl)methylidene]amino}phenyl)formamido]-3-(C-hydroxycarbonimidoyl)-3-methoxypropanamido]benzamido}-3-(propan-2-yloxy)phenyl)methylidene]amino}-3-(propan-2-yloxy)benzoic acid.
Structure
Thumb
Synonyms
ValueSource
2-Hydroxy-4-{[hydroxy(2-hydroxy-4-{4-[(2R,3S)-2-[(4-{[hydroxy(4-nitrophenyl)methylidene]amino}phenyl)formamido]-3-(C-hydroxycarbonimidoyl)-3-methoxypropanamido]benzamido}-3-(propan-2-yloxy)phenyl)methylidene]amino}-3-(propan-2-yloxy)benzoateGenerator
Chemical FormulaC46H45N7O15
Average Mass935.9000 Da
Monoisotopic Mass935.29736 Da
IUPAC Name({4-[(4-{[(1R)-2-carbamoyl-1-({4-[(4-{[4-carboxy-3-hydroxy-2-(propan-2-yloxy)phenyl]carbamoyl}-3-hydroxy-2-(propan-2-yloxy)phenyl)carbamoyl]phenyl}carbamoyl)-2-methoxyethyl]carbamoyl}phenyl)carbamoyl]phenyl}nitro)-lambda1-oxidanyl
Traditional Name{4-[(4-{[(1R)-2-carbamoyl-1-{[4-({4-[(4-carboxy-3-hydroxy-2-isopropoxyphenyl)carbamoyl]-3-hydroxy-2-isopropoxyphenyl}carbamoyl)phenyl]carbamoyl}-2-methoxyethyl]carbamoyl}phenyl)carbamoyl]phenylnitro}-lambda1-oxidanyl
CAS Registry NumberNot Available
SMILES
CO[C@@H]([C@@H](NC(=O)C1=CC=C(NC(=O)C2=CC=C(C=C2)[N+]([O-])=O)C=C1)C(=O)NC1=CC=C(C=C1)C(=O)NC1=C(OC(C)C)C(O)=C(C=C1)C(=O)NC1=C(OC(C)C)C(O)=C(C=C1)C(O)=O)C(N)=O
InChI Identifier
InChI=1S/C46H45N7O15/c1-22(2)67-37-32(20-18-30(35(37)54)44(60)51-33-21-19-31(46(62)63)36(55)38(33)68-23(3)4)50-42(58)24-6-14-28(15-7-24)49-45(61)34(39(66-5)40(47)56)52-43(59)25-8-12-27(13-9-25)48-41(57)26-10-16-29(17-11-26)53(64)65/h6-23,34,39,54-55H,1-5H3,(H2,47,56)(H,48,57)(H,49,61)(H,50,58)(H,51,60)(H,52,59)(H,62,63)/t34-,39+/m1/s1
InChI KeyQUGQHCSHBGAXCK-BYHBGFKFSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
CorallococcusNPAtlas
Corallococcus coralloidesLOTUS Database
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.26ALOGPS
logP5.16ChemAxon
logS-6ALOGPS
pKa (Strongest Acidic)2.66ChemAxon
pKa (Strongest Basic)-5.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count15ChemAxon
Hydrogen Donor Count9ChemAxon
Polar Surface Area337.18 ŲChemAxon
Rotatable Bond Count19ChemAxon
Refractivity248.24 m³·mol⁻¹ChemAxon
Polarizability98.07 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA022029
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78441619
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139589627
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Hawkins PME, Liu DY, Linington RG, Payne RJ: Solid-phase synthesis of coralmycin A/epi-coralmycin A and desmethoxycoralmycin A. Org Biomol Chem. 2021 Jul 21;19(28):6291-6300. doi: 10.1039/d1ob01062j. [PubMed:34212970 ]