NP-MRD: Showing NP-Card for 5-hydroxymethylasterric acid (NP0015039)

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Record Information

Version

2.0

Created at

2021-01-06 00:10:16 UTC

Updated at

2021-07-15 17:18:52 UTC

NP-MRD ID

NP0015039

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5-hydroxymethylasterric acid

Provided By

NPAtlas

Description

5-hydroxymethylasterric acid is found in Mycobacterium tuberculosis. Based on a literature review very few articles have been published on 5-hydroxymethylasterric acid.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242117133D          

 42 43  0  0  0  0            999 V2000
   -0.6193    2.9323   -3.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3030    2.0188   -2.9904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7038    1.0475   -2.2078 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5485    0.9713   -2.2153 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5265    0.1275   -1.3871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9001    0.2450   -1.4075 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7373   -0.5661   -0.6775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1180   -0.4400   -0.7047 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1354   -1.5312    0.0997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7655   -1.6692    0.1375 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2418   -2.6649    0.9449 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1065   -3.4907    1.6886 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9390   -0.8394   -0.6076 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4222   -0.9913   -0.5577 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2556   -0.3455    0.3432 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7788    0.5302    1.2954 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.1638    2.1835 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0999    2.1147    3.2170 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1811    2.5832    3.9501 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9594    0.8901    2.0852 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4639   -0.0039    1.1160 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8101   -0.2116    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6229   -0.6311    0.2357 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1010   -1.5594   -0.7783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2777   -1.8958   -0.9775 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1580   -2.1619   -1.6464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5786    3.9001   -3.2336 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4269    2.6328   -3.9725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1722    3.1676   -4.7370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3460    1.0113   -2.0264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5379    0.2762   -1.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7888   -2.1781    0.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8096   -3.9537    0.9369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6917   -2.9259    2.4539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5431   -4.3363    2.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2783    0.7445    1.3709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4978    2.9264    2.7685 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4295    1.5831    3.9389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7277    3.1782    3.3560 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6636    1.3741    2.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4133   -0.7480    0.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3830   -2.2745   -2.6310 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 10 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 17 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 13  5  1  0  0  0  0
 23 15  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
  1 29  1  0  0  0  0
  6 30  1  0  0  0  0
  8 31  1  0  0  0  0
  9 32  1  0  0  0  0
 12 33  1  0  0  0  0
 12 34  1  0  0  0  0
 12 35  1  0  0  0  0
 16 36  1  0  0  0  0
 18 37  1  0  0  0  0
 18 38  1  0  0  0  0
 19 39  1  0  0  0  0
 20 40  1  0  0  0  0
 22 41  1  0  0  0  0
 26 42  1  0  0  0  0
M  END

     RDKit          3D

 42 43  0  0  0  0  0  0  0  0999 V2000
   -0.6193    2.9323   -3.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3030    2.0188   -2.9904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7038    1.0475   -2.2078 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5485    0.9713   -2.2153 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5265    0.1275   -1.3871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9001    0.2450   -1.4075 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7373   -0.5661   -0.6775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1180   -0.4400   -0.7047 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1354   -1.5312    0.0997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7655   -1.6692    0.1375 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2418   -2.6649    0.9449 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1065   -3.4907    1.6886 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9390   -0.8394   -0.6076 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4222   -0.9913   -0.5577 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2556   -0.3455    0.3432 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7788    0.5302    1.2954 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.1638    2.1835 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0999    2.1147    3.2170 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1811    2.5832    3.9501 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9594    0.8901    2.0852 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4639   -0.0039    1.1160 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8101   -0.2116    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6229   -0.6311    0.2357 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1010   -1.5594   -0.7783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2777   -1.8958   -0.9775 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1580   -2.1619   -1.6464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5786    3.9001   -3.2336 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4269    2.6328   -3.9725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1722    3.1676   -4.7370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3460    1.0113   -2.0264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5379    0.2762   -1.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7888   -2.1781    0.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8096   -3.9537    0.9369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6917   -2.9259    2.4539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5431   -4.3363    2.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2783    0.7445    1.3709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4978    2.9264    2.7685 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4295    1.5831    3.9389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7277    3.1782    3.3560 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6636    1.3741    2.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4133   -0.7480    0.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3830   -2.2745   -2.6310 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  1  0
  7  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 10 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 17 20  2  0
 20 21  1  0
 21 22  1  0
 21 23  2  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 13  5  1  0
 23 15  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  6 30  1  0
  8 31  1  0
  9 32  1  0
 12 33  1  0
 12 34  1  0
 12 35  1  0
 16 36  1  0
 18 37  1  0
 18 38  1  0
 19 39  1  0
 20 40  1  0
 22 41  1  0
 26 42  1  0
M  END


  Mrv1652306242117133D          

 42 43  0  0  0  0            999 V2000
   -0.6193    2.9323   -3.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3030    2.0188   -2.9904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7038    1.0475   -2.2078 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5485    0.9713   -2.2153 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5265    0.1275   -1.3871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9001    0.2450   -1.4075 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7373   -0.5661   -0.6775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1180   -0.4400   -0.7047 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1354   -1.5312    0.0997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7655   -1.6692    0.1375 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2418   -2.6649    0.9449 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1065   -3.4907    1.6886 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9390   -0.8394   -0.6076 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4222   -0.9913   -0.5577 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2556   -0.3455    0.3432 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7788    0.5302    1.2954 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.1638    2.1835 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0999    2.1147    3.2170 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1811    2.5832    3.9501 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9594    0.8901    2.0852 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4639   -0.0039    1.1160 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8101   -0.2116    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6229   -0.6311    0.2357 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1010   -1.5594   -0.7783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2777   -1.8958   -0.9775 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1580   -2.1619   -1.6464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5786    3.9001   -3.2336 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4269    2.6328   -3.9725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1722    3.1676   -4.7370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3460    1.0113   -2.0264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5379    0.2762   -1.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7888   -2.1781    0.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8096   -3.9537    0.9369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6917   -2.9259    2.4539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5431   -4.3363    2.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2783    0.7445    1.3709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4978    2.9264    2.7685 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4295    1.5831    3.9389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7277    3.1782    3.3560 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6636    1.3741    2.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4133   -0.7480    0.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3830   -2.2745   -2.6310 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 10 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 17 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 13  5  1  0  0  0  0
 23 15  1  0  0  0  0
  1 27  1  0  0  0  0
  1 28  1  0  0  0  0
  1 29  1  0  0  0  0
  6 30  1  0  0  0  0
  8 31  1  0  0  0  0
  9 32  1  0  0  0  0
 12 33  1  0  0  0  0
 12 34  1  0  0  0  0
 12 35  1  0  0  0  0
 16 36  1  0  0  0  0
 18 37  1  0  0  0  0
 18 38  1  0  0  0  0
 19 39  1  0  0  0  0
 20 40  1  0  0  0  0
 22 41  1  0  0  0  0
 26 42  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0015039

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)C1=C(O[H])C([H])=C(C([H])=C1OC1=C(OC([H])([H])[H])C([H])=C(O[H])C([H])=C1C(=O)OC([H])([H])[H])C([H])([H])O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C17H16O9/c1-24-13-6-9(19)5-10(17(23)25-2)15(13)26-12-4-8(7-18)3-11(20)14(12)16(21)22/h3-6,18-20H,7H2,1-2H3,(H,21,22)

> <INCHI_KEY>
LCKLPKVOZZBTLE-UHFFFAOYSA-N

> <FORMULA>
C17H16O9

> <MOLECULAR_WEIGHT>
364.306

> <EXACT_MASS>
364.079432095

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
34.884112217136305

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
2-hydroxy-6-[4-hydroxy-2-methoxy-6-(methoxycarbonyl)phenoxy]-4-(hydroxymethyl)benzoic acid

> <ALOGPS_LOGP>
2.25

> <JCHEM_LOGP>
2.252441194666666

> <ALOGPS_LOGS>
-3.50

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
9.41461693310077

> <JCHEM_PKA_STRONGEST_ACIDIC>
2.293652798788269

> <JCHEM_PKA_STRONGEST_BASIC>
-2.933057599414603

> <JCHEM_POLAR_SURFACE_AREA>
142.75

> <JCHEM_REFRACTIVITY>
88.82119999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.16e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-hydroxy-6-[4-hydroxy-2-methoxy-6-(methoxycarbonyl)phenoxy]-4-(hydroxymethyl)benzoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 42 43  0  0  0  0  0  0  0  0999 V2000
   -0.6193    2.9323   -3.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3030    2.0188   -2.9904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7038    1.0475   -2.2078 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5485    0.9713   -2.2153 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5265    0.1275   -1.3871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9001    0.2450   -1.4075 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7373   -0.5661   -0.6775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1180   -0.4400   -0.7047 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1354   -1.5312    0.0997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7655   -1.6692    0.1375 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2418   -2.6649    0.9449 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1065   -3.4907    1.6886 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9390   -0.8394   -0.6076 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4222   -0.9913   -0.5577 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2556   -0.3455    0.3432 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7788    0.5302    1.2954 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.1638    2.1835 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0999    2.1147    3.2170 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1811    2.5832    3.9501 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9594    0.8901    2.0852 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4639   -0.0039    1.1160 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8101   -0.2116    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6229   -0.6311    0.2357 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1010   -1.5594   -0.7783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2777   -1.8958   -0.9775 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1580   -2.1619   -1.6464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5786    3.9001   -3.2336 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4269    2.6328   -3.9725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1722    3.1676   -4.7370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3460    1.0113   -2.0264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5379    0.2762   -1.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7888   -2.1781    0.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8096   -3.9537    0.9369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6917   -2.9259    2.4539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5431   -4.3363    2.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2783    0.7445    1.3709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4978    2.9264    2.7685 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4295    1.5831    3.9389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7277    3.1782    3.3560 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6636    1.3741    2.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4133   -0.7480    0.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3830   -2.2745   -2.6310 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  1  0
  7  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 10 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 17 20  2  0
 20 21  1  0
 21 22  1  0
 21 23  2  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 13  5  1  0
 23 15  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  6 30  1  0
  8 31  1  0
  9 32  1  0
 12 33  1  0
 12 34  1  0
 12 35  1  0
 16 36  1  0
 18 37  1  0
 18 38  1  0
 19 39  1  0
 20 40  1  0
 22 41  1  0
 26 42  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -0.619   2.932  -3.798  0.00  0.00           C+0
HETATM    2  O   UNK     0      -1.303   2.019  -2.990  0.00  0.00           O+0
HETATM    3  C   UNK     0      -0.704   1.048  -2.208  0.00  0.00           C+0
HETATM    4  O   UNK     0       0.549   0.971  -2.215  0.00  0.00           O+0
HETATM    5  C   UNK     0      -1.527   0.128  -1.387  0.00  0.00           C+0
HETATM    6  C   UNK     0      -2.900   0.245  -1.408  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.737  -0.566  -0.678  0.00  0.00           C+0
HETATM    8  O   UNK     0      -5.118  -0.440  -0.705  0.00  0.00           O+0
HETATM    9  C   UNK     0      -3.135  -1.531   0.100  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.766  -1.669   0.138  0.00  0.00           C+0
HETATM   11  O   UNK     0      -1.242  -2.665   0.945  0.00  0.00           O+0
HETATM   12  C   UNK     0      -2.107  -3.491   1.689  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.939  -0.839  -0.608  0.00  0.00           C+0
HETATM   14  O   UNK     0       0.422  -0.991  -0.558  0.00  0.00           O+0
HETATM   15  C   UNK     0       1.256  -0.346   0.343  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.779   0.530   1.295  0.00  0.00           C+0
HETATM   17  C   UNK     0       1.621   1.164   2.184  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.100   2.115   3.217  0.00  0.00           C+0
HETATM   19  O   UNK     0       2.181   2.583   3.950  0.00  0.00           O+0
HETATM   20  C   UNK     0       2.959   0.890   2.085  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.464  -0.004   1.116  0.00  0.00           C+0
HETATM   22  O   UNK     0       4.810  -0.212   1.097  0.00  0.00           O+0
HETATM   23  C   UNK     0       2.623  -0.631   0.236  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.101  -1.559  -0.778  0.00  0.00           C+0
HETATM   25  O   UNK     0       4.278  -1.896  -0.978  0.00  0.00           O+0
HETATM   26  O   UNK     0       2.158  -2.162  -1.646  0.00  0.00           O+0
HETATM   27  H   UNK     0      -0.579   3.900  -3.234  0.00  0.00           H+0
HETATM   28  H   UNK     0       0.427   2.633  -3.973  0.00  0.00           H+0
HETATM   29  H   UNK     0      -1.172   3.168  -4.737  0.00  0.00           H+0
HETATM   30  H   UNK     0      -3.346   1.011  -2.026  0.00  0.00           H+0
HETATM   31  H   UNK     0      -5.538   0.276  -1.283  0.00  0.00           H+0
HETATM   32  H   UNK     0      -3.789  -2.178   0.681  0.00  0.00           H+0
HETATM   33  H   UNK     0      -2.810  -3.954   0.937  0.00  0.00           H+0
HETATM   34  H   UNK     0      -2.692  -2.926   2.454  0.00  0.00           H+0
HETATM   35  H   UNK     0      -1.543  -4.336   2.147  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.278   0.745   1.371  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.498   2.926   2.769  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.430   1.583   3.939  0.00  0.00           H+0
HETATM   39  H   UNK     0       2.728   3.178   3.356  0.00  0.00           H+0
HETATM   40  H   UNK     0       3.664   1.374   2.774  0.00  0.00           H+0
HETATM   41  H   UNK     0       5.413  -0.748   0.566  0.00  0.00           H+0
HETATM   42  H   UNK     0       2.383  -2.275  -2.631  0.00  0.00           H+0
CONECT    1    2   27   28   29                                             
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   13                                                  
CONECT    6    5    7   30                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7   31                                                       
CONECT    9    7   10   32                                                  
CONECT   10    9   11   13                                                  
CONECT   11   10   12                                                       
CONECT   12   11   33   34   35                                             
CONECT   13   10   14    5                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   23                                                  
CONECT   16   15   17   36                                                  
CONECT   17   16   18   20                                                  
CONECT   18   17   19   37   38                                             
CONECT   19   18   39                                                       
CONECT   20   17   21   40                                                  
CONECT   21   20   22   23                                                  
CONECT   22   21   41                                                       
CONECT   23   21   24   15                                                  
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   42                                                       
CONECT   27    1                                                            
CONECT   28    1                                                            
CONECT   29    1                                                            
CONECT   30    6                                                            
CONECT   31    8                                                            
CONECT   32    9                                                            
CONECT   33   12                                                            
CONECT   34   12                                                            
CONECT   35   12                                                            
CONECT   36   16                                                            
CONECT   37   18                                                            
CONECT   38   18                                                            
CONECT   39   19                                                            
CONECT   40   20                                                            
CONECT   41   22                                                            
CONECT   42   26                                                            
MASTER        0    0    0    0    0    0    0    0   42    0   86    0
END

RDKit          3D

42 43  0  0  0  0  0  0  0  0999 V2000
   -0.6193    2.9323   -3.7976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3030    2.0188   -2.9904 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7038    1.0475   -2.2078 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5485    0.9713   -2.2153 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5265    0.1275   -1.3871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9001    0.2450   -1.4075 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7373   -0.5661   -0.6775 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1180   -0.4400   -0.7047 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1354   -1.5312    0.0997 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7655   -1.6692    0.1375 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2418   -2.6649    0.9449 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1065   -3.4907    1.6886 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9390   -0.8394   -0.6076 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4222   -0.9913   -0.5577 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2556   -0.3455    0.3432 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7788    0.5302    1.2954 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6215    1.1638    2.1835 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0999    2.1147    3.2170 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1811    2.5832    3.9501 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9594    0.8901    2.0852 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4639   -0.0039    1.1160 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8101   -0.2116    1.0969 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6229   -0.6311    0.2357 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1010   -1.5594   -0.7783 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2777   -1.8958   -0.9775 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1580   -2.1619   -1.6464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5786    3.9001   -3.2336 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4269    2.6328   -3.9725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1722    3.1676   -4.7370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3460    1.0113   -2.0264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5379    0.2762   -1.2829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7888   -2.1781    0.6811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8096   -3.9537    0.9369 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6917   -2.9259    2.4539 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5431   -4.3363    2.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2783    0.7445    1.3709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4978    2.9264    2.7685 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4295    1.5831    3.9389 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7277    3.1782    3.3560 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6636    1.3741    2.7737 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4133   -0.7480    0.5657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3830   -2.2745   -2.6310 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  1  0
  7  9  2  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 10 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 17 20  2  0
 20 21  1  0
 21 22  1  0
 21 23  2  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 13  5  1  0
 23 15  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  6 30  1  0
  8 31  1  0
  9 32  1  0
 12 33  1  0
 12 34  1  0
 12 35  1  0
 16 36  1  0
 18 37  1  0
 18 38  1  0
 19 39  1  0
 20 40  1  0
 22 41  1  0
 26 42  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
5-Hydroxymethylasterrate	Generator
2-Hydroxy-6-[4-hydroxy-2-methoxy-6-(methoxycarbonyl)phenoxy]-4-(hydroxymethyl)benzoate	Generator

Chemical Formula

C₁₇H₁₆O₉

Average Mass

364.3060 Da

Monoisotopic Mass

364.07943 Da

IUPAC Name

2-hydroxy-6-[4-hydroxy-2-methoxy-6-(methoxycarbonyl)phenoxy]-4-(hydroxymethyl)benzoic acid

Traditional Name

2-hydroxy-6-[4-hydroxy-2-methoxy-6-(methoxycarbonyl)phenoxy]-4-(hydroxymethyl)benzoic acid

CAS Registry Number

Not Available

SMILES

COC(=O)C1=CC(O)=CC(OC)=C1OC1=CC(CO)=CC(O)=C1C(O)=O

InChI Identifier

InChI=1S/C17H16O9/c1-24-13-6-9(19)5-10(17(23)25-2)15(13)26-12-4-8(7-18)3-11(20)14(12)16(21)22/h3-6,18-20H,7H2,1-2H3,(H,21,22)

InChI Key

LCKLPKVOZZBTLE-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Mycobacterium tuberculosis	NPAtlas	26706176

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.25	ALOGPS
logP	2.25	ChemAxon
logS	-3.5	ALOGPS
pKa (Strongest Acidic)	2.29	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	142.75 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	88.82 m³·mol⁻¹	ChemAxon
Polarizability	34.88 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA011385

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

58869702

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

127037582

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for 5-hydroxymethylasterric acid (NP0015039)

MOL for NP0015039 (5-hydroxymethylasterric acid)

3D MOL for NP0015039 (5-hydroxymethylasterric acid)

3D SDF for NP0015039 (5-hydroxymethylasterric acid)

3D-SDF for NP0015039 (5-hydroxymethylasterric acid)

PDB for NP0015039 (5-hydroxymethylasterric acid)

3D PDB for NP0015039 (5-hydroxymethylasterric acid)

SMILES for NP0015039 (5-hydroxymethylasterric acid)

INCHI for NP0015039 (5-hydroxymethylasterric acid)

Structure for NP0015039 (5-hydroxymethylasterric acid)

3D Structure for NP0015039 (5-hydroxymethylasterric acid)