NP-MRD: Showing NP-Card for Suncheonoside C (NP0014288)

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Record Information

Version

1.0

Created at

2021-01-05 23:30:04 UTC

Updated at

2021-07-15 17:16:53 UTC

NP-MRD ID

NP0014288

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Suncheonoside C

Provided By

NPAtlas

Description

Suncheonoside C is found in Streptomyces sp. It was first documented in 2015 (PMID: 26078114). Based on a literature review very few articles have been published on [2-methoxy-3,5-dimethyl-6-(propan-2-yl)-4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl](methylsulfanyl)methanone (PMID: 34348423) (PMID: 34348419) (PMID: 34348356) (PMID: 34348241).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242119543D          

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M  END

     RDKit          3D

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M  END


  Mrv1652306242119543D          

 58 59  0  0  0  0            999 V2000
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    0.9223    2.7701    1.7569 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4357    2.6107   -0.0242 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4277    0.2128   -0.7076 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7703   -1.9393    1.0038 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0273   -2.8438   -1.8325 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9449   -3.8230   -0.2622 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5169   -3.2093   -0.8798 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7903   -0.7329   -1.8252 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8785   -0.9336   -1.3371 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.2269   -0.1055    1.7016 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.0640   -2.7549   -0.1154 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.8229   -1.7435    2.3452 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2108   -3.3550    1.6663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4745   -2.1321    1.6391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4809    2.3996   -2.5761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5566    1.9830   -0.8218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9052    0.6746   -2.0705 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  1  0  0  0  0
 14 15  1  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
  6 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
 20 24  2  0  0  0  0
 24 25  1  0  0  0  0
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 25 27  1  0  0  0  0
 27 28  1  0  0  0  0
 24  3  1  0  0  0  0
 16  8  1  0  0  0  0
  1 29  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  5 32  1  0  0  0  0
  5 33  1  0  0  0  0
  5 34  1  0  0  0  0
  8 35  1  6  0  0  0
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 19 47  1  0  0  0  0
 19 48  1  0  0  0  0
 21 49  1  6  0  0  0
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 22 51  1  0  0  0  0
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 23 53  1  0  0  0  0
 23 54  1  0  0  0  0
 23 55  1  0  0  0  0
 28 56  1  0  0  0  0
 28 57  1  0  0  0  0
 28 58  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0014288

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])[C@]([H])(OC2=C(C(=C(C(=O)SC([H])([H])[H])C(OC([H])([H])[H])=C2C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])O[C@@]([H])(C([H])([H])[H])[C@]([H])(O[H])[C@@]1([H])O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H30O7S/c1-8(2)12-9(3)17(10(4)18(25-6)13(12)19(24)28-7)27-20-16(23)15(22)14(21)11(5)26-20/h8,11,14-16,20-23H,1-7H3/t11-,14-,15+,16+,20-/m0/s1

> <INCHI_KEY>
CQPBGBNJEZUZBV-WAPRPUHNSA-N

> <FORMULA>
C20H30O7S

> <MOLECULAR_WEIGHT>
414.51

> <EXACT_MASS>
414.17122448

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
44.38801994739556

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
[2-methoxy-3,5-dimethyl-6-(propan-2-yl)-4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl](methylsulfanyl)methanone

> <ALOGPS_LOGP>
1.74

> <JCHEM_LOGP>
3.3208095023333337

> <ALOGPS_LOGS>
-3.09

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.26866295079154

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.213593910051099

> <JCHEM_PKA_STRONGEST_BASIC>
-3.6122003628896113

> <JCHEM_POLAR_SURFACE_AREA>
105.45000000000002

> <JCHEM_REFRACTIVITY>
107.69699999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.36e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2-isopropyl-6-methoxy-3,5-dimethyl-4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)(methylsulfanyl)methanone

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 58 59  0  0  0  0  0  0  0  0999 V2000
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    4.4261   -2.9947   -0.8071 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.1961   -2.2367    0.8386 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.8809   -1.8700    0.1669 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0751   -1.8341   -0.7387 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3724   -2.2783    1.5673 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4931    0.5789    0.0254 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8575    0.9130   -0.2984 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6381    1.0581    0.7088 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5623    1.1498   -1.8994 S   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3103    1.5800   -1.8273 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7714    3.6631    0.9379 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.3763    4.7764    1.0256 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0409    3.5997    0.4579 H   0  0  0  0  0  0  0  0  0  0  0  0
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    3.9449   -3.8230   -0.2622 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5169   -3.2093   -0.8798 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7903   -0.7329   -1.8252 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8785   -0.9336   -1.3371 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6264    1.3045    0.0731 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3974    2.2719   -1.5034 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2269   -0.1055    1.7016 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6758    2.5305    0.9918 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0640   -2.7549   -0.1154 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6896   -2.1398    1.5288 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9568   -2.7928    1.4128 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2561   -2.7182   -0.1797 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9339   -1.3298   -0.3425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4507   -2.9165   -0.9064 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7517   -1.5738   -1.7785 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8229   -1.7435    2.3452 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.4745   -2.1321    1.6391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4809    2.3996   -2.5761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5566    1.9830   -0.8218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9052    0.6746   -2.0705 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
  6 18  2  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 20 24  2  0
 24 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 24  3  1  0
 16  8  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  5 32  1  0
  5 33  1  0
  5 34  1  0
  8 35  1  6
 10 36  1  1
 11 37  1  0
 11 38  1  0
 11 39  1  0
 12 40  1  6
 13 41  1  0
 14 42  1  1
 15 43  1  0
 16 44  1  1
 17 45  1  0
 19 46  1  0
 19 47  1  0
 19 48  1  0
 21 49  1  6
 22 50  1  0
 22 51  1  0
 22 52  1  0
 23 53  1  0
 23 54  1  0
 23 55  1  0
 28 56  1  0
 28 57  1  0
 28 58  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0      -2.655   3.700   1.034  0.00  0.00           C+0
HETATM    2  O   UNK     0      -2.108   2.991  -0.047  0.00  0.00           O+0
HETATM    3  C   UNK     0      -1.641   1.706   0.175  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.325   1.486   0.549  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.578   2.639   0.711  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.159   0.229   0.771  0.00  0.00           C+0
HETATM    7  O   UNK     0       1.451   0.019   1.137  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.573  -0.152   0.344  0.00  0.00           C+0
HETATM    9  O   UNK     0       2.931  -1.506   0.177  0.00  0.00           O+0
HETATM   10  C   UNK     0       4.278  -1.704   0.013  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.426  -2.995  -0.807  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.007  -0.643  -0.747  0.00  0.00           C+0
HETATM   13  O   UNK     0       6.380  -0.857  -0.503  0.00  0.00           O+0
HETATM   14  C   UNK     0       4.726   0.764  -0.237  0.00  0.00           C+0
HETATM   15  O   UNK     0       3.993   1.413  -1.235  0.00  0.00           O+0
HETATM   16  C   UNK     0       3.749   0.562   0.935  0.00  0.00           C+0
HETATM   17  O   UNK     0       3.493   1.742   1.571  0.00  0.00           O+0
HETATM   18  C   UNK     0      -0.685  -0.852   0.620  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.196  -2.237   0.839  0.00  0.00           C+0
HETATM   20  C   UNK     0      -2.048  -0.676   0.237  0.00  0.00           C+0
HETATM   21  C   UNK     0      -2.881  -1.870   0.167  0.00  0.00           C+0
HETATM   22  C   UNK     0      -4.075  -1.834  -0.739  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.372  -2.278   1.567  0.00  0.00           C+0
HETATM   24  C   UNK     0      -2.493   0.579   0.025  0.00  0.00           C+0
HETATM   25  C   UNK     0      -3.857   0.913  -0.298  0.00  0.00           C+0
HETATM   26  O   UNK     0      -4.638   1.058   0.709  0.00  0.00           O+0
HETATM   27  S   UNK     0      -4.562   1.150  -1.899  0.00  0.00           S+0
HETATM   28  C   UNK     0      -6.310   1.580  -1.827  0.00  0.00           C+0
HETATM   29  H   UNK     0      -3.771   3.663   0.938  0.00  0.00           H+0
HETATM   30  H   UNK     0      -2.384   3.320   2.020  0.00  0.00           H+0
HETATM   31  H   UNK     0      -2.376   4.776   1.026  0.00  0.00           H+0
HETATM   32  H   UNK     0       0.041   3.600   0.458  0.00  0.00           H+0
HETATM   33  H   UNK     0       0.922   2.770   1.757  0.00  0.00           H+0
HETATM   34  H   UNK     0       1.436   2.611  -0.024  0.00  0.00           H+0
HETATM   35  H   UNK     0       2.428   0.213  -0.708  0.00  0.00           H+0
HETATM   36  H   UNK     0       4.770  -1.939   1.004  0.00  0.00           H+0
HETATM   37  H   UNK     0       4.027  -2.844  -1.833  0.00  0.00           H+0
HETATM   38  H   UNK     0       3.945  -3.823  -0.262  0.00  0.00           H+0
HETATM   39  H   UNK     0       5.517  -3.209  -0.880  0.00  0.00           H+0
HETATM   40  H   UNK     0       4.790  -0.733  -1.825  0.00  0.00           H+0
HETATM   41  H   UNK     0       6.878  -0.934  -1.337  0.00  0.00           H+0
HETATM   42  H   UNK     0       5.626   1.305   0.073  0.00  0.00           H+0
HETATM   43  H   UNK     0       4.397   2.272  -1.503  0.00  0.00           H+0
HETATM   44  H   UNK     0       4.227  -0.106   1.702  0.00  0.00           H+0
HETATM   45  H   UNK     0       3.676   2.531   0.992  0.00  0.00           H+0
HETATM   46  H   UNK     0       0.064  -2.755  -0.115  0.00  0.00           H+0
HETATM   47  H   UNK     0       0.690  -2.140   1.529  0.00  0.00           H+0
HETATM   48  H   UNK     0      -0.957  -2.793   1.413  0.00  0.00           H+0
HETATM   49  H   UNK     0      -2.256  -2.718  -0.180  0.00  0.00           H+0
HETATM   50  H   UNK     0      -4.934  -1.330  -0.343  0.00  0.00           H+0
HETATM   51  H   UNK     0      -4.451  -2.917  -0.906  0.00  0.00           H+0
HETATM   52  H   UNK     0      -3.752  -1.574  -1.779  0.00  0.00           H+0
HETATM   53  H   UNK     0      -2.823  -1.744   2.345  0.00  0.00           H+0
HETATM   54  H   UNK     0      -3.211  -3.355   1.666  0.00  0.00           H+0
HETATM   55  H   UNK     0      -4.474  -2.132   1.639  0.00  0.00           H+0
HETATM   56  H   UNK     0      -6.481   2.400  -2.576  0.00  0.00           H+0
HETATM   57  H   UNK     0      -6.557   1.983  -0.822  0.00  0.00           H+0
HETATM   58  H   UNK     0      -6.905   0.675  -2.071  0.00  0.00           H+0
CONECT    1    2   29   30   31                                             
CONECT    2    1    3                                                       
CONECT    3    2    4   24                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4   32   33   34                                             
CONECT    6    4    7   18                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   16   35                                             
CONECT    9    8   10                                                       
CONECT   10    9   11   12   36                                             
CONECT   11   10   37   38   39                                             
CONECT   12   10   13   14   40                                             
CONECT   13   12   41                                                       
CONECT   14   12   15   16   42                                             
CONECT   15   14   43                                                       
CONECT   16   14   17    8   44                                             
CONECT   17   16   45                                                       
CONECT   18    6   19   20                                                  
CONECT   19   18   46   47   48                                             
CONECT   20   18   21   24                                                  
CONECT   21   20   22   23   49                                             
CONECT   22   21   50   51   52                                             
CONECT   23   21   53   54   55                                             
CONECT   24   20   25    3                                                  
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28                                                       
CONECT   28   27   56   57   58                                             
CONECT   29    1                                                            
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    5                                                            
CONECT   33    5                                                            
CONECT   34    5                                                            
CONECT   35    8                                                            
CONECT   36   10                                                            
CONECT   37   11                                                            
CONECT   38   11                                                            
CONECT   39   11                                                            
CONECT   40   12                                                            
CONECT   41   13                                                            
CONECT   42   14                                                            
CONECT   43   15                                                            
CONECT   44   16                                                            
CONECT   45   17                                                            
CONECT   46   19                                                            
CONECT   47   19                                                            
CONECT   48   19                                                            
CONECT   49   21                                                            
CONECT   50   22                                                            
CONECT   51   22                                                            
CONECT   52   22                                                            
CONECT   53   23                                                            
CONECT   54   23                                                            
CONECT   55   23                                                            
CONECT   56   28                                                            
CONECT   57   28                                                            
CONECT   58   28                                                            
MASTER        0    0    0    0    0    0    0    0   58    0  118    0
END

RDKit          3D

58 59  0  0  0  0  0  0  0  0999 V2000
   -2.6549    3.7005    1.0338 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1084    2.9913   -0.0474 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6408    1.7064    0.1746 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3247    1.4855    0.5488 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5781    2.6386    0.7107 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1593    0.2285    0.7710 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4512    0.0186    1.1365 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5728   -0.1519    0.3440 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.9312   -1.5055    0.1771 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2780   -1.7039    0.0134 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.4261   -2.9947   -0.8071 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0067   -0.6432   -0.7469 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.3804   -0.8569   -0.5032 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7261    0.7637   -0.2371 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.9926    1.4134   -1.2349 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7487    0.5619    0.9345 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.4931    1.7418    1.5706 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6847   -0.8515    0.6200 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1961   -2.2367    0.8386 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0484   -0.6762    0.2365 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8809   -1.8700    0.1669 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0751   -1.8341   -0.7387 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3724   -2.2783    1.5673 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4931    0.5789    0.0254 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8575    0.9130   -0.2984 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6381    1.0581    0.7088 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5623    1.1498   -1.8994 S   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3103    1.5800   -1.8273 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7714    3.6631    0.9379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3837    3.3198    2.0196 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3763    4.7764    1.0256 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0409    3.5997    0.4579 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9223    2.7701    1.7569 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4357    2.6107   -0.0242 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4277    0.2128   -0.7076 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7703   -1.9393    1.0038 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0273   -2.8438   -1.8325 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9449   -3.8230   -0.2622 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5169   -3.2093   -0.8798 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7903   -0.7329   -1.8252 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8785   -0.9336   -1.3371 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6264    1.3045    0.0731 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3974    2.2719   -1.5034 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2269   -0.1055    1.7016 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6758    2.5305    0.9918 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0640   -2.7549   -0.1154 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6896   -2.1398    1.5288 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9568   -2.7928    1.4128 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2561   -2.7182   -0.1797 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9339   -1.3298   -0.3425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4507   -2.9165   -0.9064 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7517   -1.5738   -1.7785 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8229   -1.7435    2.3452 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2108   -3.3550    1.6663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4745   -2.1321    1.6391 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4809    2.3996   -2.5761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5566    1.9830   -0.8218 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9052    0.6746   -2.0705 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  4  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 12 13  1  0
 12 14  1  0
 14 15  1  0
 14 16  1  0
 16 17  1  0
  6 18  2  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 20 24  2  0
 24 25  1  0
 25 26  2  0
 25 27  1  0
 27 28  1  0
 24  3  1  0
 16  8  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  5 32  1  0
  5 33  1  0
  5 34  1  0
  8 35  1  6
 10 36  1  1
 11 37  1  0
 11 38  1  0
 11 39  1  0
 12 40  1  6
 13 41  1  0
 14 42  1  1
 15 43  1  0
 16 44  1  1
 17 45  1  0
 19 46  1  0
 19 47  1  0
 19 48  1  0
 21 49  1  6
 22 50  1  0
 22 51  1  0
 22 52  1  0
 23 53  1  0
 23 54  1  0
 23 55  1  0
 28 56  1  0
 28 57  1  0
 28 58  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
[2-Methoxy-3,5-dimethyl-6-(propan-2-yl)-4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl](methylsulphanyl)methanone	Generator

Chemical Formula

C₂₀H₃₀O₇S

Average Mass

414.5100 Da

Monoisotopic Mass

414.17122 Da

IUPAC Name

[2-methoxy-3,5-dimethyl-6-(propan-2-yl)-4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl](methylsulfanyl)methanone

Traditional Name

(2-isopropyl-6-methoxy-3,5-dimethyl-4-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}phenyl)(methylsulfanyl)methanone

CAS Registry Number

Not Available

SMILES

COC1=C(C)C(O[C@@H]2O[C@@H](C)[C@H](O)[C@@H](O)[C@H]2O)=C(C)C(C(C)C)=C1C(=O)SC

InChI Identifier

InChI=1S/C20H30O7S/c1-8(2)12-9(3)17(10(4)18(25-6)13(12)19(24)28-7)27-20-16(23)15(22)14(21)11(5)26-20/h8,11,14-16,20-23H,1-7H3/t11-,14-,15+,16+,20-/m0/s1

InChI Key

CQPBGBNJEZUZBV-WAPRPUHNSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces sp.	NPAtlas	26078114

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.74	ALOGPS
logP	3.32	ChemAxon
logS	-3.1	ALOGPS
pKa (Strongest Acidic)	12.21	ChemAxon
pKa (Strongest Basic)	-3.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	105.45 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	107.7 m³·mol⁻¹	ChemAxon
Polarizability	44.39 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA018319

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

35517079

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

122180311

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Shin B, Ahn S, Noh M, Shin J, Oh DC: Suncheonosides A-D, Benzothioate Glycosides from a Marine-Derived Streptomyces sp. J Nat Prod. 2015 Jun 26;78(6):1390-6. doi: 10.1021/acs.jnatprod.5b00284. Epub 2015 Jun 16. [PubMed:26078114 ]
Yahia S, El-Farahaty R, El-Gilany AH, Shoaib R, Ramadan R, Salem N: Serum adiponectin, body adiposity and metabolic parameters in obese Egyptian children with Down syndrome. J Pediatr Endocrinol Metab. 2021 Aug 4. pii: jpem-2021-0324. doi: 10.1515/jpem-2021-0324. [PubMed:34348423 ]
Kim SY, Colaiacovo S, Dave S, Coughlin K, Langdon K, Stein R, Saleh M: Aromatase deficiency in an Ontario Old Order Mennonite family. J Pediatr Endocrinol Metab. 2021 Aug 5. pii: jpem-2021-0229. doi: 10.1515/jpem-2021-0229. [PubMed:34348419 ]
Yilmaz E, Azizoglu ZB, Aslan K, Erdem S, Haliloglu Y, Suna PA, Yay AH, Deniz K, Tasdemir A, Per S, Unal E, Karakukcu M, Patiroglu T: Therapeutic effects of vitamin D and IL-22 on methotrexate-induced mucositis in mice. Anticancer Drugs. 2021 Aug 3. pii: 00001813-900000000-98349. doi: 10.1097/CAD.0000000000001128. [PubMed:34348356 ]
Frank M, Bulut Y, Czympiel L, Weissing R, Nahrstedt V, Wilhelm M, Grosch M, Raauf A, Verma A, Fischer T, Mathur S: Piezo-enhanced Activation of Dinitrogen for Room Temperature Production of Ammonia. Nanotechnology. 2021 Aug 4. doi: 10.1088/1361-6528/ac1a96. [PubMed:34348241 ]

Showing NP-Card for Suncheonoside C (NP0014288)

MOL for NP0014288 (Suncheonoside C)

3D MOL for NP0014288 (Suncheonoside C)

3D SDF for NP0014288 (Suncheonoside C)

3D-SDF for NP0014288 (Suncheonoside C)

PDB for NP0014288 (Suncheonoside C)

3D PDB for NP0014288 (Suncheonoside C)

SMILES for NP0014288 (Suncheonoside C)

INCHI for NP0014288 (Suncheonoside C)

Structure for NP0014288 (Suncheonoside C)

3D Structure for NP0014288 (Suncheonoside C)