Np mrd loader

Record Information
Version2.0
Created at2021-01-05 23:17:57 UTC
Updated at2021-07-15 17:16:13 UTC
NP-MRD IDNP0014044
Secondary Accession NumbersNone
Natural Product Identification
Common NameMalleobactin F
Provided ByNPAtlasNPAtlas Logo
Description Malleobactin F is found in Burkholderia thailandensis E264. Malleobactin F was first documented in 2015 (PMID: 25873483). Based on a literature review very few articles have been published on (2R,3R)-3-{[(1S)-1-{[(1S)-1-[(4-aminobutyl)-C-hydroxycarbonimidoyl]-3-methylbutyl]-C-hydroxycarbonimidoyl}-2-hydroxyethyl]-C-hydroxycarbonimidoyl}-2-hydroxy-3-{[(2S)-1-hydroxy-5-(N-hydroxyformamido)-2-[(hydroxymethylidene)amino]pentylidene]amino}propanoic acid.
Structure
Thumb
Synonyms
ValueSource
(2R,3R)-3-{[(1S)-1-{[(1S)-1-[(4-aminobutyl)-C-hydroxycarbonimidoyl]-3-methylbutyl]-C-hydroxycarbonimidoyl}-2-hydroxyethyl]-C-hydroxycarbonimidoyl}-2-hydroxy-3-{[(2S)-1-hydroxy-5-(N-hydroxyformamido)-2-[(hydroxymethylidene)amino]pentylidene]amino}propanoateGenerator
Chemical FormulaC24H43N7O11
Average Mass605.6460 Da
Monoisotopic Mass605.30206 Da
IUPAC Name(2R,3R)-3-{[(1S)-1-{[(1S)-1-[(4-aminobutyl)carbamoyl]-3-methylbutyl]carbamoyl}-2-hydroxyethyl]carbamoyl}-2-hydroxy-3-[(2S)-5-(N-hydroxyformamido)-2-formamidopentanamido]propanoic acid
Traditional Name(2R,3R)-3-{[(1S)-1-{[(1S)-1-[(4-aminobutyl)carbamoyl]-3-methylbutyl]carbamoyl}-2-hydroxyethyl]carbamoyl}-2-hydroxy-3-[(2S)-5-(N-hydroxyformamido)-2-formamidopentanamido]propanoic acid
CAS Registry NumberNot Available
SMILES
CC(C)C[C@H](NC(=O)[C@H](CO)NC(=O)[C@H](NC(=O)[C@H](CCCN(O)C=O)NC=O)[C@@H](O)C(O)=O)C(=O)NCCCCN
InChI Identifier
InChI=1S/C24H43N7O11/c1-14(2)10-16(20(36)26-8-4-3-7-25)28-22(38)17(11-32)29-23(39)18(19(35)24(40)41)30-21(37)15(27-12-33)6-5-9-31(42)13-34/h12-19,32,35,42H,3-11,25H2,1-2H3,(H,26,36)(H,27,33)(H,28,38)(H,29,39)(H,30,37)(H,40,41)/t15-,16-,17-,18+,19+/m0/s1
InChI KeyQSLSHPMCGQEYQR-LTFXXXRZSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Burkholderia thailandensis E264NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2.8ALOGPS
logP-7.4ChemAxon
logS-2.6ALOGPS
pKa (Strongest Acidic)3.18ChemAxon
pKa (Strongest Basic)9.91ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count10ChemAxon
Polar Surface Area289.82 ŲChemAxon
Rotatable Bond Count21ChemAxon
Refractivity143.54 m³·mol⁻¹ChemAxon
Polarizability60.57 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA020238
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78438703
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139588755
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Franke J, Ishida K, Hertweck C: Plasticity of the malleobactin pathway and its impact on siderophore action in human pathogenic bacteria. Chemistry. 2015 May 26;21(22):8010-4. doi: 10.1002/chem.201500757. Epub 2015 Apr 14. [PubMed:25873483 ]