NP-MRD: Showing NP-Card for Cavinafungin B (NP0013781)

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Record Information

Version

2.0

Created at

2021-01-05 23:05:22 UTC

Updated at

2021-07-15 17:15:26 UTC

NP-MRD ID

NP0013781

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Cavinafungin B

Provided By

NPAtlas

Description

Cavinafungin B is found in Colispora cavincola. Based on a literature review very few articles have been published on Cavinafungin B.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307042106583D          

124124  0  0  0  0            999 V2000
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M  END

     RDKit          3D

124124  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1652307042106583D          

124124  0  0  0  0            999 V2000
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   12.5254   -0.6179    0.7601 H   0  0  0  0  0  0  0  0  0  0  0  0
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   10.1913    0.3584    0.6552 H   0  0  0  0  0  0  0  0  0  0  0  0
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   12.2977    1.8140   -1.0321 H   0  0  0  0  0  0  0  0  0  0  0  0
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   10.0933    2.9022   -1.0968 H   0  0  0  0  0  0  0  0  0  0  0  0
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    8.3271    2.3540   -3.3857 H   0  0  0  0  0  0  0  0  0  0  0  0
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 53124  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0013781

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC([H])([H])C([H])([H])[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@@]1([H])N(C(=O)[C@@]([H])(N([H])C(=O)C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C(\[H])=C(\[H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H])[C@]([H])(O[H])C([H])([H])[H])C([H])([H])[C@]([H])(C([H])([H])[H])C1([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C(=O)N([H])[C@]([H])(C([H])=O)C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C40H71N5O8/c1-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-34(49)43-36(31(6)48)40(53)45-26-29(4)25-33(45)38(51)44-35(28(2)3)39(52)42-32(23-24-46)37(50)41-30(5)27-47/h14-15,27-33,35-36,46,48H,7-13,16-26H2,1-6H3,(H,41,50)(H,42,52)(H,43,49)(H,44,51)/b15-14-/t29-,30+,31-,32+,33+,35+,36+/m1/s1

> <INCHI_KEY>
CZLLOPRJUYUCQD-AFRNNPFGSA-N

> <FORMULA>
C40H71N5O8

> <MOLECULAR_WEIGHT>
750.035

> <EXACT_MASS>
749.530264266

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
124

> <JCHEM_AVERAGE_POLARIZABILITY>
87.50930229116139

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(9Z)-N-[(2S,3R)-3-hydroxy-1-[(2S,4R)-2-{[(1S)-1-{[(1S)-3-hydroxy-1-{[(2S)-1-oxopropan-2-yl]carbamoyl}propyl]carbamoyl}-2-methylpropyl]carbamoyl}-4-methylpyrrolidin-1-yl]-1-oxobutan-2-yl]octadec-9-enamide

> <ALOGPS_LOGP>
5.16

> <JCHEM_LOGP>
3.8504356676666696

> <ALOGPS_LOGS>
-5.23

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.308712089624507

> <JCHEM_PKA_STRONGEST_ACIDIC>
11.825279323487464

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3584224243589866

> <JCHEM_POLAR_SURFACE_AREA>
194.24

> <JCHEM_REFRACTIVITY>
206.4917000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
28

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.44e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(9Z)-N-[(2S,3R)-3-hydroxy-1-[(2S,4R)-2-{[(1S)-1-{[(1S)-3-hydroxy-1-{[(2S)-1-oxopropan-2-yl]carbamoyl}propyl]carbamoyl}-2-methylpropyl]carbamoyl}-4-methylpyrrolidin-1-yl]-1-oxobutan-2-yl]octadec-9-enamide

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

124124  0  0  0  0  0  0  0  0999 V2000
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   14.7427    0.7646    1.7938 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4967    1.2854    1.0956 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3060    0.3840    1.2358 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1136    1.0118    0.5475 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3863    1.2087   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2939    1.9121   -1.6280 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9416    1.1707   -1.6449 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0178    2.0849   -2.3068 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9321    2.5937   -1.8364 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2657    2.4601   -0.5893 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5477    1.4269    0.4479 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1610    0.0719   -0.0009 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2703   -1.0981    0.8645 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4835   -1.0690    2.1404 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0429   -0.7380    1.9490 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1903   -1.5399    1.0832 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8093   -0.8514    1.0091 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7825    0.2203    1.6436 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.2936   -1.9323   -0.4154 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -0.6950    0.3273   -1.0700 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.9378   -2.4307   -1.9873 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5035   -2.2076   -3.4057 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -3.7936   -0.7192   -3.4776 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.9598   -0.9302   -0.8369 O   0  0  0  0  0  0  0  0  0  0  0  0
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  -10.6166    0.5512    2.3527 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5113    2.0542    2.1248 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.9519    2.7826    3.1953 O   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8573    0.3562   -0.0489 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

HEADER    PROTEIN                                 04-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   04-JUL-21         0                                  
HETATM    1  C   UNK     0      15.165  -0.572   1.247  0.00  0.00           C+0
HETATM    2  C   UNK     0      14.743   0.765   1.794  0.00  0.00           C+0
HETATM    3  C   UNK     0      13.497   1.285   1.096  0.00  0.00           C+0
HETATM    4  C   UNK     0      12.306   0.384   1.236  0.00  0.00           C+0
HETATM    5  C   UNK     0      11.114   1.012   0.548  0.00  0.00           C+0
HETATM    6  C   UNK     0      11.386   1.209  -0.903  0.00  0.00           C+0
HETATM    7  C   UNK     0      10.294   1.912  -1.628  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.942   1.171  -1.645  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.018   2.085  -2.307  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.932   2.594  -1.836  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.266   2.460  -0.589  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.548   1.427   0.448  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.161   0.072  -0.001  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.270  -1.098   0.865  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.484  -1.069   2.140  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.043  -0.738   1.949  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.190  -1.540   1.083  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.809  -0.851   1.009  0.00  0.00           C+0
HETATM   19  O   UNK     0       1.783   0.220   1.644  0.00  0.00           O+0
HETATM   20  N   UNK     0       0.820  -1.429   0.298  0.00  0.00           N+0
HETATM   21  C   UNK     0      -0.294  -1.932  -0.415  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.106  -0.897  -1.090  0.00  0.00           C+0
HETATM   23  O   UNK     0      -0.695   0.327  -1.070  0.00  0.00           O+0
HETATM   24  N   UNK     0      -2.319  -1.165  -1.741  0.00  0.00           N+0
HETATM   25  C   UNK     0      -2.938  -2.431  -1.987  0.00  0.00           C+0
HETATM   26  C   UNK     0      -3.503  -2.208  -3.406  0.00  0.00           C+0
HETATM   27  C   UNK     0      -2.444  -2.642  -4.385  0.00  0.00           C+0
HETATM   28  C   UNK     0      -3.794  -0.719  -3.478  0.00  0.00           C+0
HETATM   29  C   UNK     0      -3.308  -0.142  -2.192  0.00  0.00           C+0
HETATM   30  C   UNK     0      -4.242  -0.068  -1.098  0.00  0.00           C+0
HETATM   31  O   UNK     0      -3.871  -0.501   0.041  0.00  0.00           O+0
HETATM   32  N   UNK     0      -5.597   0.448  -1.082  0.00  0.00           N+0
HETATM   33  C   UNK     0      -6.268   0.343   0.210  0.00  0.00           C+0
HETATM   34  C   UNK     0      -7.642  -0.128   0.112  0.00  0.00           C+0
HETATM   35  O   UNK     0      -7.960  -0.930  -0.837  0.00  0.00           O+0
HETATM   36  N   UNK     0      -8.645   0.246   1.014  0.00  0.00           N+0
HETATM   37  C   UNK     0      -9.999  -0.149   1.103  0.00  0.00           C+0
HETATM   38  C   UNK     0     -10.617   0.551   2.353  0.00  0.00           C+0
HETATM   39  C   UNK     0     -10.511   2.054   2.125  0.00  0.00           C+0
HETATM   40  O   UNK     0     -10.952   2.783   3.195  0.00  0.00           O+0
HETATM   41  C   UNK     0     -10.857   0.356  -0.049  0.00  0.00           C+0
HETATM   42  O   UNK     0     -10.376   1.119  -0.913  0.00  0.00           O+0
HETATM   43  N   UNK     0     -12.184  -0.075  -0.083  0.00  0.00           N+0
HETATM   44  C   UNK     0     -13.165   0.280  -1.073  0.00  0.00           C+0
HETATM   45  C   UNK     0     -13.426  -0.909  -1.997  0.00  0.00           C+0
HETATM   46  C   UNK     0     -14.360   0.823  -0.475  0.00  0.00           C+0
HETATM   47  O   UNK     0     -14.446   1.230   0.691  0.00  0.00           O+0
HETATM   48  C   UNK     0      -6.027   1.618   0.994  0.00  0.00           C+0
HETATM   49  C   UNK     0      -6.594   2.852   0.425  0.00  0.00           C+0
HETATM   50  C   UNK     0      -6.096   1.427   2.450  0.00  0.00           C+0
HETATM   51  C   UNK     0      -1.153  -2.696   0.602  0.00  0.00           C+0
HETATM   52  C   UNK     0      -0.332  -3.765   1.335  0.00  0.00           C+0
HETATM   53  O   UNK     0      -1.612  -1.845   1.610  0.00  0.00           O+0
HETATM   54  H   UNK     0      16.266  -0.648   1.205  0.00  0.00           H+0
HETATM   55  H   UNK     0      14.734  -0.665   0.226  0.00  0.00           H+0
HETATM   56  H   UNK     0      14.756  -1.424   1.852  0.00  0.00           H+0
HETATM   57  H   UNK     0      15.550   1.496   1.491  0.00  0.00           H+0
HETATM   58  H   UNK     0      14.568   0.774   2.870  0.00  0.00           H+0
HETATM   59  H   UNK     0      13.226   2.288   1.411  0.00  0.00           H+0
HETATM   60  H   UNK     0      13.793   1.314   0.009  0.00  0.00           H+0
HETATM   61  H   UNK     0      12.029   0.165   2.300  0.00  0.00           H+0
HETATM   62  H   UNK     0      12.525  -0.618   0.760  0.00  0.00           H+0
HETATM   63  H   UNK     0      10.902   2.003   1.050  0.00  0.00           H+0
HETATM   64  H   UNK     0      10.191   0.358   0.655  0.00  0.00           H+0
HETATM   65  H   UNK     0      11.595   0.192  -1.372  0.00  0.00           H+0
HETATM   66  H   UNK     0      12.298   1.814  -1.032  0.00  0.00           H+0
HETATM   67  H   UNK     0      10.633   2.190  -2.637  0.00  0.00           H+0
HETATM   68  H   UNK     0      10.093   2.902  -1.097  0.00  0.00           H+0
HETATM   69  H   UNK     0       8.727   0.715  -0.726  0.00  0.00           H+0
HETATM   70  H   UNK     0       9.159   0.324  -2.383  0.00  0.00           H+0
HETATM   71  H   UNK     0       8.327   2.354  -3.386  0.00  0.00           H+0
HETATM   72  H   UNK     0       6.436   3.308  -2.615  0.00  0.00           H+0
HETATM   73  H   UNK     0       5.136   2.381  -0.867  0.00  0.00           H+0
HETATM   74  H   UNK     0       6.209   3.506  -0.050  0.00  0.00           H+0
HETATM   75  H   UNK     0       5.789   1.682   1.292  0.00  0.00           H+0
HETATM   76  H   UNK     0       7.522   1.583   0.902  0.00  0.00           H+0
HETATM   77  H   UNK     0       5.024   0.182  -0.285  0.00  0.00           H+0
HETATM   78  H   UNK     0       6.569  -0.120  -1.013  0.00  0.00           H+0
HETATM   79  H   UNK     0       7.357  -1.201   1.187  0.00  0.00           H+0
HETATM   80  H   UNK     0       6.072  -2.067   0.376  0.00  0.00           H+0
HETATM   81  H   UNK     0       5.913  -0.420   2.911  0.00  0.00           H+0
HETATM   82  H   UNK     0       5.535  -2.125   2.555  0.00  0.00           H+0
HETATM   83  H   UNK     0       3.598  -0.902   3.020  0.00  0.00           H+0
HETATM   84  H   UNK     0       3.955   0.375   1.834  0.00  0.00           H+0
HETATM   85  H   UNK     0       3.486  -1.728   0.056  0.00  0.00           H+0
HETATM   86  H   UNK     0       2.913  -2.547   1.529  0.00  0.00           H+0
HETATM   87  H   UNK     0      -0.021  -0.434   0.751  0.00  0.00           H+0
HETATM   88  H   UNK     0       0.034  -2.712  -1.180  0.00  0.00           H+0
HETATM   89  H   UNK     0      -3.782  -2.557  -1.261  0.00  0.00           H+0
HETATM   90  H   UNK     0      -2.281  -3.294  -2.081  0.00  0.00           H+0
HETATM   91  H   UNK     0      -4.435  -2.795  -3.455  0.00  0.00           H+0
HETATM   92  H   UNK     0      -1.470  -2.814  -3.853  0.00  0.00           H+0
HETATM   93  H   UNK     0      -2.713  -3.643  -4.812  0.00  0.00           H+0
HETATM   94  H   UNK     0      -2.235  -1.938  -5.197  0.00  0.00           H+0
HETATM   95  H   UNK     0      -3.107  -0.323  -4.284  0.00  0.00           H+0
HETATM   96  H   UNK     0      -4.848  -0.505  -3.731  0.00  0.00           H+0
HETATM   97  H   UNK     0      -2.753   0.822  -2.393  0.00  0.00           H+0
HETATM   98  H   UNK     0      -6.016   0.842  -1.878  0.00  0.00           H+0
HETATM   99  H   UNK     0      -5.691  -0.438   0.827  0.00  0.00           H+0
HETATM  100  H   UNK     0      -8.320   0.932   1.774  0.00  0.00           H+0
HETATM  101  H   UNK     0     -10.198  -1.200   1.127  0.00  0.00           H+0
HETATM  102  H   UNK     0     -10.002   0.245   3.210  0.00  0.00           H+0
HETATM  103  H   UNK     0     -11.664   0.225   2.397  0.00  0.00           H+0
HETATM  104  H   UNK     0     -11.255   2.286   1.283  0.00  0.00           H+0
HETATM  105  H   UNK     0      -9.557   2.382   1.724  0.00  0.00           H+0
HETATM  106  H   UNK     0     -10.619   3.742   3.158  0.00  0.00           H+0
HETATM  107  H   UNK     0     -12.544  -0.741   0.676  0.00  0.00           H+0
HETATM  108  H   UNK     0     -12.648   1.092  -1.701  0.00  0.00           H+0
HETATM  109  H   UNK     0     -14.121  -1.586  -1.452  0.00  0.00           H+0
HETATM  110  H   UNK     0     -13.906  -0.531  -2.936  0.00  0.00           H+0
HETATM  111  H   UNK     0     -12.481  -1.387  -2.251  0.00  0.00           H+0
HETATM  112  H   UNK     0     -15.259   0.891  -1.074  0.00  0.00           H+0
HETATM  113  H   UNK     0      -4.852   1.736   0.782  0.00  0.00           H+0
HETATM  114  H   UNK     0      -7.467   2.663  -0.239  0.00  0.00           H+0
HETATM  115  H   UNK     0      -5.852   3.411  -0.196  0.00  0.00           H+0
HETATM  116  H   UNK     0      -6.874   3.540   1.262  0.00  0.00           H+0
HETATM  117  H   UNK     0      -5.099   1.685   2.933  0.00  0.00           H+0
HETATM  118  H   UNK     0      -6.259   0.343   2.731  0.00  0.00           H+0
HETATM  119  H   UNK     0      -6.850   2.052   2.971  0.00  0.00           H+0
HETATM  120  H   UNK     0      -1.978  -3.215   0.125  0.00  0.00           H+0
HETATM  121  H   UNK     0       0.242  -3.308   2.201  0.00  0.00           H+0
HETATM  122  H   UNK     0      -1.012  -4.525   1.736  0.00  0.00           H+0
HETATM  123  H   UNK     0       0.421  -4.229   0.691  0.00  0.00           H+0
HETATM  124  H   UNK     0      -0.856  -1.665   2.253  0.00  0.00           H+0
CONECT    1    2   54   55   56                                             
CONECT    2    1    3   57   58                                             
CONECT    3    2    4   59   60                                             
CONECT    4    3    5   61   62                                             
CONECT    5    4    6   63   64                                             
CONECT    6    5    7   65   66                                             
CONECT    7    6    8   67   68                                             
CONECT    8    7    9   69   70                                             
CONECT    9    8   10   71                                                  
CONECT   10    9   11   72                                                  
CONECT   11   10   12   73   74                                             
CONECT   12   11   13   75   76                                             
CONECT   13   12   14   77   78                                             
CONECT   14   13   15   79   80                                             
CONECT   15   14   16   81   82                                             
CONECT   16   15   17   83   84                                             
CONECT   17   16   18   85   86                                             
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   87                                                  
CONECT   21   20   22   51   88                                             
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   29                                                  
CONECT   25   24   26   89   90                                             
CONECT   26   25   27   28   91                                             
CONECT   27   26   92   93   94                                             
CONECT   28   26   29   95   96                                             
CONECT   29   28   30   24   97                                             
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   33   98                                                  
CONECT   33   32   34   48   99                                             
CONECT   34   33   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   37  100                                                  
CONECT   37   36   38   41  101                                             
CONECT   38   37   39  102  103                                             
CONECT   39   38   40  104  105                                             
CONECT   40   39  106                                                       
CONECT   41   37   42   43                                                  
CONECT   42   41                                                            
CONECT   43   41   44  107                                                  
CONECT   44   43   45   46  108                                             
CONECT   45   44  109  110  111                                             
CONECT   46   44   47  112                                                  
CONECT   47   46                                                            
CONECT   48   33   49   50  113                                             
CONECT   49   48  114  115  116                                             
CONECT   50   48  117  118  119                                             
CONECT   51   21   52   53  120                                             
CONECT   52   51  121  122  123                                             
CONECT   53   51  124                                                       
CONECT   54    1                                                            
CONECT   55    1                                                            
CONECT   56    1                                                            
CONECT   57    2                                                            
CONECT   58    2                                                            
CONECT   59    3                                                            
CONECT   60    3                                                            
CONECT   61    4                                                            
CONECT   62    4                                                            
CONECT   63    5                                                            
CONECT   64    5                                                            
CONECT   65    6                                                            
CONECT   66    6                                                            
CONECT   67    7                                                            
CONECT   68    7                                                            
CONECT   69    8                                                            
CONECT   70    8                                                            
CONECT   71    9                                                            
CONECT   72   10                                                            
CONECT   73   11                                                            
CONECT   74   11                                                            
CONECT   75   12                                                            
CONECT   76   12                                                            
CONECT   77   13                                                            
CONECT   78   13                                                            
CONECT   79   14                                                            
CONECT   80   14                                                            
CONECT   81   15                                                            
CONECT   82   15                                                            
CONECT   83   16                                                            
CONECT   84   16                                                            
CONECT   85   17                                                            
CONECT   86   17                                                            
CONECT   87   20                                                            
CONECT   88   21                                                            
CONECT   89   25                                                            
CONECT   90   25                                                            
CONECT   91   26                                                            
CONECT   92   27                                                            
CONECT   93   27                                                            
CONECT   94   27                                                            
CONECT   95   28                                                            
CONECT   96   28                                                            
CONECT   97   29                                                            
CONECT   98   32                                                            
CONECT   99   33                                                            
CONECT  100   36                                                            
CONECT  101   37                                                            
CONECT  102   38                                                            
CONECT  103   38                                                            
CONECT  104   39                                                            
CONECT  105   39                                                            
CONECT  106   40                                                            
CONECT  107   43                                                            
CONECT  108   44                                                            
CONECT  109   45                                                            
CONECT  110   45                                                            
CONECT  111   45                                                            
CONECT  112   46                                                            
CONECT  113   48                                                            
CONECT  114   49                                                            
CONECT  115   49                                                            
CONECT  116   49                                                            
CONECT  117   50                                                            
CONECT  118   50                                                            
CONECT  119   50                                                            
CONECT  120   51                                                            
CONECT  121   52                                                            
CONECT  122   52                                                            
CONECT  123   52                                                            
CONECT  124   53                                                            
MASTER        0    0    0    0    0    0    0    0  124    0  248    0
END

RDKit          3D

124124  0  0  0  0  0  0  0  0999 V2000
   15.1645   -0.5724    1.2472 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7427    0.7646    1.7938 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4967    1.2854    1.0956 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3060    0.3840    1.2358 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1136    1.0118    0.5475 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3863    1.2087   -0.9031 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2939    1.9121   -1.6280 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9416    1.1707   -1.6449 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0178    2.0849   -2.3068 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9321    2.5937   -1.8364 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2657    2.4601   -0.5893 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5477    1.4269    0.4479 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1610    0.0719   -0.0009 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2703   -1.0981    0.8645 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4835   -1.0690    2.1404 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0429   -0.7380    1.9490 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1903   -1.5399    1.0832 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.7825    0.2203    1.6436 O   0  0  0  0  0  0  0  0  0  0  0  0
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   13.7935    1.3143    0.0090 H   0  0  0  0  0  0  0  0  0  0  0  0
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  -14.1206   -1.5864   -1.4515 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.8516    1.7361    0.7817 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.8736    3.5403    1.2618 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.9782   -3.2145    0.1253 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2416   -3.3080    2.2006 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0124   -4.5250    1.7365 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4214   -4.2288    0.6914 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8564   -1.6648    2.2535 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(9Z)-N-[(2S,3R)-3-Hydroxy-1-[(2S,4R)-2-{[(1S)-1-{[(1S)-3-hydroxy-1-{[(2S)-1-oxopropan-2-yl]-C-hydroxycarbonimidoyl}propyl]-C-hydroxycarbonimidoyl}-2-methylpropyl]-C-hydroxycarbonimidoyl}-4-methylpyrrolidin-1-yl]-1-oxobutan-2-yl]octadec-9-enimidate	Generator

Chemical Formula

C₄₀H₇₁N₅O₈

Average Mass

750.0350 Da

Monoisotopic Mass

749.53026 Da

IUPAC Name

(9Z)-N-[(2S,3R)-3-hydroxy-1-[(2S,4R)-2-{[(1S)-1-{[(1S)-3-hydroxy-1-{[(2S)-1-oxopropan-2-yl]carbamoyl}propyl]carbamoyl}-2-methylpropyl]carbamoyl}-4-methylpyrrolidin-1-yl]-1-oxobutan-2-yl]octadec-9-enamide

Traditional Name

CAS Registry Number

Not Available

SMILES

CCCCCCCC\C=C/CCCCCCCC(=O)N[C@@H]([C@@H](C)O)C(=O)N1C[C@H](C)C[C@H]1C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCO)C(=O)N[C@@H](C)C=O

InChI Identifier

InChI=1S/C40H71N5O8/c1-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-34(49)43-36(31(6)48)40(53)45-26-29(4)25-33(45)38(51)44-35(28(2)3)39(52)42-32(23-24-46)37(50)41-30(5)27-47/h14-15,27-33,35-36,46,48H,7-13,16-26H2,1-6H3,(H,41,50)(H,42,52)(H,43,49)(H,44,51)/b15-14-/t29-,30+,31-,32+,33+,35+,36+/m1/s1

InChI Key

CZLLOPRJUYUCQD-AFRNNPFGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Colispora cavincola	NPAtlas	25636062

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.16	ALOGPS
logP	3.85	ChemAxon
logS	-5.2	ALOGPS
pKa (Strongest Acidic)	11.83	ChemAxon
pKa (Strongest Basic)	-1.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	194.24 Å²	ChemAxon
Rotatable Bond Count	28	ChemAxon
Refractivity	206.49 m³·mol⁻¹	ChemAxon
Polarizability	87.51 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA010420

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

59004882

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

122177447

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Cavinafungin B (NP0013781)

MOL for NP0013781 (Cavinafungin B)

3D MOL for NP0013781 (Cavinafungin B)

3D SDF for NP0013781 (Cavinafungin B)

3D-SDF for NP0013781 (Cavinafungin B)

PDB for NP0013781 (Cavinafungin B)

3D PDB for NP0013781 (Cavinafungin B)

SMILES for NP0013781 (Cavinafungin B)

INCHI for NP0013781 (Cavinafungin B)

Structure for NP0013781 (Cavinafungin B)

3D Structure for NP0013781 (Cavinafungin B)