Np mrd loader

Record Information
Version2.0
Created at2021-01-05 22:50:57 UTC
Updated at2021-08-19 23:59:51 UTC
NP-MRD IDNP0013508
Secondary Accession NumbersNone
Natural Product Identification
Common NameCoronafacic acid
Provided ByNPAtlasNPAtlas Logo
DescriptionCoronafacic acid is also known as coronafacate. Coronafacic acid is found in Pseudomonas syringae and Streptomyces. Coronafacic acid was first documented in 2015 (PMID: 25423263). Based on a literature review very few articles have been published on Coronafacic acid (PMID: 34012085) (PMID: 33072470) (PMID: 31999008) (PMID: 29934297).
Structure
Thumb
Synonyms
ValueSource
CoronafacateGenerator
(3AS,6R,7as)-6-ethyl-1-oxo-2,3,3a,6,7,7a-hexahydro-1H-indene-4-carboxylateGenerator
Chemical FormulaC12H16O3
Average Mass208.2570 Da
Monoisotopic Mass208.10994 Da
IUPAC Name(3aS,6R,7aS)-6-ethyl-1-oxo-2,3,3a,6,7,7a-hexahydro-1H-indene-4-carboxylic acid
Traditional Namecoronafacic acid
CAS Registry NumberNot Available
SMILES
CC[C@@H]1C[C@H]2[C@H](CCC2=O)C(=C1)C(O)=O
InChI Identifier
InChI=1S/C12H16O3/c1-2-7-5-9-8(3-4-11(9)13)10(6-7)12(14)15/h6-9H,2-5H2,1H3,(H,14,15)/t7-,8+,9+/m1/s1
InChI KeyONMAUQRMJXNSCG-VGMNWLOBSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Pseudomonas syringaeLOTUS Database
StreptomycesNPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling Point375.40 °C. @ 760.00 mm Hg (est)The Good Scents Company Information System
Water Solubility1922 mg/L @ 25 °C (est)The Good Scents Company Information System
LogP1.850 (est)The Good Scents Company Information System
Predicted Properties
PropertyValueSource
logP2.11ALOGPS
logP2.1ChemAxon
logS-2.2ALOGPS
pKa (Strongest Acidic)4.62ChemAxon
pKa (Strongest Basic)-7.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area54.37 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity56.43 m³·mol⁻¹ChemAxon
Polarizability22.46 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
NPAtlas IDNPA013714
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID102905
KEGG Compound IDC15765
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound114969
PDB IDNot Available
ChEBI ID80089
Good Scents IDrw1441801
References
General References
  1. Fyans JK, Altowairish MS, Li Y, Bignell DR: Characterization of the Coronatine-Like Phytotoxins Produced by the Common Scab Pathogen Streptomyces scabies. Mol Plant Microbe Interact. 2015 Apr;28(4):443-54. doi: 10.1094/MPMI-09-14-0255-R. [PubMed:25423263 ]
  2. Winn M, Rowlinson M, Wang F, Bering L, Francis D, Levy C, Micklefield J: Discovery, characterization and engineering of ligases for amide synthesis. Nature. 2021 May;593(7859):391-398. doi: 10.1038/s41586-021-03447-w. Epub 2021 May 19. [PubMed:34012085 ]
  3. Watanabe R, Kato N, Hayashi K, Tozawa S, Ogura Y, Kuwahara S, Ueda M: Stereoselective Syntheses of all the Possible Stereoisomers of Coronafacic Acid. ChemistryOpen. 2020 Oct 9;9(10):1008-1017. doi: 10.1002/open.202000210. eCollection 2020 Oct. [PubMed:33072470 ]
  4. Kato N, Miyagawa S, Nomoto H, Nakayama M, Iwashita M, Ueda M: A scalable synthesis of (+)-coronafacic acid. Chirality. 2020 Apr;32(4):423-430. doi: 10.1002/chir.23172. Epub 2020 Jan 30. [PubMed:31999008 ]
  5. Ishimaru Y, Hayashi K, Suzuki T, Fukaki H, Prusinska J, Meester C, Quareshy M, Egoshi S, Matsuura H, Takahashi K, Kato N, Kombrink E, Napier RM, Hayashi KI, Ueda M: Jasmonic Acid Inhibits Auxin-Induced Lateral Rooting Independently of the CORONATINE INSENSITIVE1 Receptor. Plant Physiol. 2018 Aug;177(4):1704-1716. doi: 10.1104/pp.18.00357. Epub 2018 Jun 22. [PubMed:29934297 ]