NP-MRD: Showing NP-Card for Boydine A (NP0013403)

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Record Information

Version

1.0

Created at

2021-01-05 22:46:40 UTC

Updated at

2021-07-15 17:14:23 UTC

NP-MRD ID

NP0013403

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Boydine A

Provided By

NPAtlas

Description

Boydine A is found in Pseudallescheria. It was first documented in 2012 (PMID: 34383397). Based on a literature review very few articles have been published on (1R,4S,5S,11R,14S,15S)-5,15-dihydroxy-1,11-bis(methylsulfanyl)-3,13-diazapentacyclo[11.7.0.0³,¹¹.0⁴,⁹.0¹⁴,¹⁹]Icosa-6,8,16,18-tetraene-2,12-dione (PMID: 25319640) (PMID: 34383398) (PMID: 34383396) (PMID: 34384147) (PMID: 34384146) (PMID: 34384145).

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242119363D          

 50 54  0  0  0  0            999 V2000
    1.3127    3.2624    1.7803 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6161    1.4910    1.7212 S   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

 50 54  0  0  0  0  0  0  0  0999 V2000
    1.3127    3.2624    1.7803 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6161    1.4910    1.7212 S   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652306242119363D          

 50 54  0  0  0  0            999 V2000
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    1.6161    1.4910    1.7212 S   0  0  0  0  0  0  0  0  0  0  0  0
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   -5.5522    1.6631   -1.2244 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0663    1.9042   -0.4826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7997    0.9827   -3.0464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1903   -0.4278   -2.1118 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  3  2  1  1  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 15  1  0  0  0  0
 15 16  1  1  0  0  0
 16 17  1  0  0  0  0
 15 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 12  3  1  0  0  0  0
 26 15  1  0  0  0  0
 27  3  1  0  0  0  0
 11  5  1  0  0  0  0
 25 19  1  0  0  0  0
  1 29  1  0  0  0  0
  1 30  1  0  0  0  0
  1 31  1  0  0  0  0
  4 32  1  0  0  0  0
  4 33  1  0  0  0  0
  6 34  1  0  0  0  0
  7 35  1  0  0  0  0
  8 36  1  0  0  0  0
  9 37  1  1  0  0  0
 10 38  1  0  0  0  0
 11 39  1  6  0  0  0
 17 40  1  0  0  0  0
 17 41  1  0  0  0  0
 17 42  1  0  0  0  0
 18 43  1  0  0  0  0
 18 44  1  0  0  0  0
 20 45  1  0  0  0  0
 21 46  1  0  0  0  0
 22 47  1  0  0  0  0
 23 48  1  1  0  0  0
 24 49  1  0  0  0  0
 25 50  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0013403

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]O[C@@]1([H])C([H])=C([H])C([H])=C2C([H])([H])[C@]3(SC([H])([H])[H])N(C(=O)[C@@]4(SC([H])([H])[H])N(C3=O)[C@@]3([H])C(=C([H])C([H])=C([H])[C@]3([H])O[H])C4([H])[H])[C@]12[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H22N2O4S2/c1-27-19-9-11-5-3-7-13(23)15(11)21(19)18(26)20(28-2)10-12-6-4-8-14(24)16(12)22(20)17(19)25/h3-8,13-16,23-24H,9-10H2,1-2H3/t13-,14-,15-,16-,19+,20+/m0/s1

> <INCHI_KEY>
YZIXVRLPOWUHSZ-PSJNWGMYSA-N

> <FORMULA>
C20H22N2O4S2

> <MOLECULAR_WEIGHT>
418.53

> <EXACT_MASS>
418.102099544

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
50

> <JCHEM_AVERAGE_POLARIZABILITY>
42.128238505042724

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,4S,5S,11R,14S,15S)-5,15-dihydroxy-1,11-bis(methylsulfanyl)-3,13-diazapentacyclo[11.7.0.0^{3,11}.0^{4,9}.0^{14,19}]icosa-6,8,16,18-tetraene-2,12-dione

> <ALOGPS_LOGP>
0.78

> <JCHEM_LOGP>
1.1542848420000016

> <ALOGPS_LOGS>
-2.67

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.426044831708627

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.823984840248492

> <JCHEM_PKA_STRONGEST_BASIC>
-3.181518510771883

> <JCHEM_POLAR_SURFACE_AREA>
81.08000000000001

> <JCHEM_REFRACTIVITY>
113.4552

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.90e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(1R,4S,5S,11R,14S,15S)-5,15-dihydroxy-1,11-bis(methylsulfanyl)-3,13-diazapentacyclo[11.7.0.0^{3,11}.0^{4,9}.0^{14,19}]icosa-6,8,16,18-tetraene-2,12-dione

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 50 54  0  0  0  0  0  0  0  0999 V2000
    1.3127    3.2624    1.7803 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6161    1.4910    1.7212 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.0743    0.8570    0.1124 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0059    1.4829   -0.9145 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2143    0.5903   -0.7026 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5022    0.6958   -0.6385 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3226   -0.4767   -0.3882 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7979   -1.6589   -0.2041 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3576   -1.8937   -0.2240 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0300   -3.0253   -1.0153 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5698   -0.7618   -0.7339 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3352   -0.5775   -0.0192 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3751   -1.4792    0.5374 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7581   -2.5545    1.0466 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0591   -1.1501    0.5143 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.8426   -1.0820    2.1292 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2847    0.2446    3.1815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8869   -2.1662   -0.3065 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1035   -1.3321   -0.4873 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4010   -1.4383   -0.3663 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3120   -0.3410   -0.6376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8495    0.8206   -1.0099 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4014    1.0691   -1.1617 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2755    1.6034   -2.4788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4903   -0.0662   -1.0600 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2927    0.0742   -0.2767 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3556    1.1250   -0.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6988    2.3480   -0.3058 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0977    3.7719    1.1748 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2948    3.5290    1.4485 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3718    3.5777    2.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2374    2.5062   -0.5614 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6364    1.4340   -1.9362 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9677    1.6851   -0.7758 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4090   -0.3889   -0.3493 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4610   -2.5195   -0.0257 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0468   -2.1230    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9514   -3.8094   -0.4155 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3343   -0.9610   -1.8382 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2340    1.2052    2.5926 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2756    0.0923    3.6071 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0531    0.4328    3.9583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4213   -2.2842   -1.2935 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0569   -3.0809    0.2571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7821   -2.4138   -0.0436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3953   -0.4362   -0.5446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5522    1.6631   -1.2244 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0663    1.9042   -0.4826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7997    0.9827   -3.0464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1903   -0.4278   -2.1118 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  3  2  1  1
  3  4  1  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 15 16  1  1
 16 17  1  0
 15 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 12  3  1  0
 26 15  1  0
 27  3  1  0
 11  5  1  0
 25 19  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  4 32  1  0
  4 33  1  0
  6 34  1  0
  7 35  1  0
  8 36  1  0
  9 37  1  1
 10 38  1  0
 11 39  1  6
 17 40  1  0
 17 41  1  0
 17 42  1  0
 18 43  1  0
 18 44  1  0
 20 45  1  0
 21 46  1  0
 22 47  1  0
 23 48  1  1
 24 49  1  0
 25 50  1  6
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  C   UNK     0       1.313   3.262   1.780  0.00  0.00           C+0
HETATM    2  S   UNK     0       1.616   1.491   1.721  0.00  0.00           S+0
HETATM    3  C   UNK     0       1.074   0.857   0.112  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.006   1.483  -0.915  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.214   0.590  -0.703  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.502   0.696  -0.639  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.323  -0.477  -0.388  0.00  0.00           C+0
HETATM    8  C   UNK     0       4.798  -1.659  -0.204  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.358  -1.894  -0.224  0.00  0.00           C+0
HETATM   10  O   UNK     0       3.030  -3.025  -1.015  0.00  0.00           O+0
HETATM   11  C   UNK     0       2.570  -0.762  -0.734  0.00  0.00           C+0
HETATM   12  N   UNK     0       1.335  -0.578  -0.019  0.00  0.00           N+0
HETATM   13  C   UNK     0       0.375  -1.479   0.537  0.00  0.00           C+0
HETATM   14  O   UNK     0       0.758  -2.555   1.047  0.00  0.00           O+0
HETATM   15  C   UNK     0      -1.059  -1.150   0.514  0.00  0.00           C+0
HETATM   16  S   UNK     0      -1.843  -1.082   2.129  0.00  0.00           S+0
HETATM   17  C   UNK     0      -1.285   0.245   3.182  0.00  0.00           C+0
HETATM   18  C   UNK     0      -1.887  -2.166  -0.307  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.103  -1.332  -0.487  0.00  0.00           C+0
HETATM   20  C   UNK     0      -4.401  -1.438  -0.366  0.00  0.00           C+0
HETATM   21  C   UNK     0      -5.312  -0.341  -0.638  0.00  0.00           C+0
HETATM   22  C   UNK     0      -4.849   0.821  -1.010  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.401   1.069  -1.162  0.00  0.00           C+0
HETATM   24  O   UNK     0      -3.276   1.603  -2.479  0.00  0.00           O+0
HETATM   25  C   UNK     0      -2.490  -0.066  -1.060  0.00  0.00           C+0
HETATM   26  N   UNK     0      -1.293   0.074  -0.277  0.00  0.00           N+0
HETATM   27  C   UNK     0      -0.356   1.125  -0.168  0.00  0.00           C+0
HETATM   28  O   UNK     0      -0.699   2.348  -0.306  0.00  0.00           O+0
HETATM   29  H   UNK     0       2.098   3.772   1.175  0.00  0.00           H+0
HETATM   30  H   UNK     0       0.295   3.529   1.448  0.00  0.00           H+0
HETATM   31  H   UNK     0       1.372   3.578   2.850  0.00  0.00           H+0
HETATM   32  H   UNK     0       2.237   2.506  -0.561  0.00  0.00           H+0
HETATM   33  H   UNK     0       1.636   1.434  -1.936  0.00  0.00           H+0
HETATM   34  H   UNK     0       4.968   1.685  -0.776  0.00  0.00           H+0
HETATM   35  H   UNK     0       6.409  -0.389  -0.349  0.00  0.00           H+0
HETATM   36  H   UNK     0       5.461  -2.519  -0.026  0.00  0.00           H+0
HETATM   37  H   UNK     0       3.047  -2.123   0.836  0.00  0.00           H+0
HETATM   38  H   UNK     0       2.951  -3.809  -0.416  0.00  0.00           H+0
HETATM   39  H   UNK     0       2.334  -0.961  -1.838  0.00  0.00           H+0
HETATM   40  H   UNK     0      -1.234   1.205   2.593  0.00  0.00           H+0
HETATM   41  H   UNK     0      -0.276   0.092   3.607  0.00  0.00           H+0
HETATM   42  H   UNK     0      -2.053   0.433   3.958  0.00  0.00           H+0
HETATM   43  H   UNK     0      -1.421  -2.284  -1.294  0.00  0.00           H+0
HETATM   44  H   UNK     0      -2.057  -3.081   0.257  0.00  0.00           H+0
HETATM   45  H   UNK     0      -4.782  -2.414  -0.044  0.00  0.00           H+0
HETATM   46  H   UNK     0      -6.395  -0.436  -0.545  0.00  0.00           H+0
HETATM   47  H   UNK     0      -5.552   1.663  -1.224  0.00  0.00           H+0
HETATM   48  H   UNK     0      -3.066   1.904  -0.483  0.00  0.00           H+0
HETATM   49  H   UNK     0      -3.800   0.983  -3.046  0.00  0.00           H+0
HETATM   50  H   UNK     0      -2.190  -0.428  -2.112  0.00  0.00           H+0
CONECT    1    2   29   30   31                                             
CONECT    2    1    3                                                       
CONECT    3    2    4   12   27                                             
CONECT    4    3    5   32   33                                             
CONECT    5    4    6   11                                                  
CONECT    6    5    7   34                                                  
CONECT    7    6    8   35                                                  
CONECT    8    7    9   36                                                  
CONECT    9    8   10   11   37                                             
CONECT   10    9   38                                                       
CONECT   11    9   12    5   39                                             
CONECT   12   11   13    3                                                  
CONECT   13   12   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16   18   26                                             
CONECT   16   15   17                                                       
CONECT   17   16   40   41   42                                             
CONECT   18   15   19   43   44                                             
CONECT   19   18   20   25                                                  
CONECT   20   19   21   45                                                  
CONECT   21   20   22   46                                                  
CONECT   22   21   23   47                                                  
CONECT   23   22   24   25   48                                             
CONECT   24   23   49                                                       
CONECT   25   23   26   19   50                                             
CONECT   26   25   27   15                                                  
CONECT   27   26   28    3                                                  
CONECT   28   27                                                            
CONECT   29    1                                                            
CONECT   30    1                                                            
CONECT   31    1                                                            
CONECT   32    4                                                            
CONECT   33    4                                                            
CONECT   34    6                                                            
CONECT   35    7                                                            
CONECT   36    8                                                            
CONECT   37    9                                                            
CONECT   38   10                                                            
CONECT   39   11                                                            
CONECT   40   17                                                            
CONECT   41   17                                                            
CONECT   42   17                                                            
CONECT   43   18                                                            
CONECT   44   18                                                            
CONECT   45   20                                                            
CONECT   46   21                                                            
CONECT   47   22                                                            
CONECT   48   23                                                            
CONECT   49   24                                                            
CONECT   50   25                                                            
MASTER        0    0    0    0    0    0    0    0   50    0  108    0
END

RDKit          3D

50 54  0  0  0  0  0  0  0  0999 V2000
    1.3127    3.2624    1.7803 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6161    1.4910    1.7212 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.0743    0.8570    0.1124 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0059    1.4829   -0.9145 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2143    0.5903   -0.7026 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5022    0.6958   -0.6385 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3226   -0.4767   -0.3882 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7979   -1.6589   -0.2041 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3576   -1.8937   -0.2240 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.0300   -3.0253   -1.0153 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5698   -0.7618   -0.7339 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3352   -0.5775   -0.0192 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3751   -1.4792    0.5374 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7581   -2.5545    1.0466 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0591   -1.1501    0.5143 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.8426   -1.0820    2.1292 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2847    0.2446    3.1815 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8869   -2.1662   -0.3065 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1035   -1.3321   -0.4873 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4010   -1.4383   -0.3663 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3120   -0.3410   -0.6376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8495    0.8206   -1.0099 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4014    1.0691   -1.1617 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.2755    1.6034   -2.4788 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4903   -0.0662   -1.0600 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.2927    0.0742   -0.2767 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3556    1.1250   -0.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6988    2.3480   -0.3058 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0977    3.7719    1.1748 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2948    3.5290    1.4485 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3718    3.5777    2.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2374    2.5062   -0.5614 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6364    1.4340   -1.9362 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9677    1.6851   -0.7758 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4090   -0.3889   -0.3493 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4610   -2.5195   -0.0257 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0468   -2.1230    0.8361 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9514   -3.8094   -0.4155 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3343   -0.9610   -1.8382 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2340    1.2052    2.5926 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2756    0.0923    3.6071 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0531    0.4328    3.9583 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4213   -2.2842   -1.2935 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0569   -3.0809    0.2571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7821   -2.4138   -0.0436 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3953   -0.4362   -0.5446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5522    1.6631   -1.2244 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0663    1.9042   -0.4826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7997    0.9827   -3.0464 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1903   -0.4278   -2.1118 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  3  2  1  1
  3  4  1  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 13 15  1  0
 15 16  1  1
 16 17  1  0
 15 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  1  0
 23 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  2  0
 12  3  1  0
 26 15  1  0
 27  3  1  0
 11  5  1  0
 25 19  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  4 32  1  0
  4 33  1  0
  6 34  1  0
  7 35  1  0
  8 36  1  0
  9 37  1  1
 10 38  1  0
 11 39  1  6
 17 40  1  0
 17 41  1  0
 17 42  1  0
 18 43  1  0
 18 44  1  0
 20 45  1  0
 21 46  1  0
 22 47  1  0
 23 48  1  1
 24 49  1  0
 25 50  1  6
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(1R,4S,5S,11R,14S,15S)-5,15-Dihydroxy-1,11-bis(methylsulphanyl)-3,13-diazapentacyclo[11.7.0.0,.0,.0,]icosa-6,8,16,18-tetraene-2,12-dione	Generator

Chemical Formula

C₂₀H₂₂N₂O₄S₂

Average Mass

418.5300 Da

Monoisotopic Mass

418.10210 Da

IUPAC Name

(1R,4S,5S,11R,14S,15S)-5,15-dihydroxy-1,11-bis(methylsulfanyl)-3,13-diazapentacyclo[11.7.0.0^{3,11}.0^{4,9}.0^{14,19}]icosa-6,8,16,18-tetraene-2,12-dione

Traditional Name

(1R,4S,5S,11R,14S,15S)-5,15-dihydroxy-1,11-bis(methylsulfanyl)-3,13-diazapentacyclo[11.7.0.0^{3,11}.0^{4,9}.0^{14,19}]icosa-6,8,16,18-tetraene-2,12-dione

CAS Registry Number

Not Available

SMILES

CS[C@@]12CC3=CC=C[C@H](O)[C@H]3N1C(=O)[C@@]1(CC3=CC=C[C@H](O)[C@H]3N1C2=O)SC

InChI Identifier

InChI=1S/C20H22N2O4S2/c1-27-19-9-11-5-3-7-13(23)15(11)21(19)18(26)20(28-2)10-12-6-4-8-14(24)16(12)22(20)17(19)25/h3-8,13-16,23-24H,9-10H2,1-2H3/t13-,14-,15-,16-,19+,20+/m0/s1

InChI Key

YZIXVRLPOWUHSZ-PSJNWGMYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Pseudallescheria	NPAtlas	25319640

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.78	ALOGPS
logP	1.15	ChemAxon
logS	-2.7	ALOGPS
pKa (Strongest Acidic)	13.82	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	81.08 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	113.46 m³·mol⁻¹	ChemAxon
Polarizability	42.13 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA015301

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78442712

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139587360

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Wu Q, Jiang N, Bo Han W, Ning Mei Y, Ming Ge H, Kai Guo Z, Seik Weng N, Xiang Tan R: Antibacterial epipolythiodioxopiperazine and unprecedented sesquiterpene from Pseudallescheria boydii, a beetle (coleoptera)-associated fungus. Org Biomol Chem. 2014 Dec 14;12(46):9405-12. doi: 10.1039/c4ob01494d. Epub 2014 Oct 16. [PubMed:25319640 ]
Mitchell PM: The cost-effectiveness of what in health and care?. 2021 Feb. [PubMed:34383398 ]
Authors unspecified: Ozanimod. 2012. [PubMed:34383397 ]
Authors unspecified: Ponesimod. 2012. [PubMed:34383396 ]
Lee J, Cho Y, Choi KH, Hwang I, Oh YL: Metastatic leiomyosarcoma of the thyroid gland: cytologic findings and differential diagnosis. J Pathol Transl Med. 2021 Aug 13. pii: jptm.2021.06.23. doi: 10.4132/jptm.2021.06.23. [PubMed:34384147 ]
Rossouw HM, Nagel SE, Pillay TS: Comparability of 11 different equations for estimating LDL cholesterol on different analysers. Clin Chem Lab Med. 2021 Aug 11. pii: cclm-2021-0747. doi: 10.1515/cclm-2021-0747. [PubMed:34384146 ]
Winkel P, Hilden J, Jakobsen JC, Lindschou J, Jensen GB, Kjoller E, Sajadieh A, Kastrup J, Kolmos HJ, Larsson A, Arnlov J, Bjerre M, Gluud C: A screening method to spot biomarkers that may warn of serious events in a chronic disease - illustrated by cardiological CLARICOR trial data. Clin Chem Lab Med. 2021 Aug 12. pii: cclm-2021-0333. doi: 10.1515/cclm-2021-0333. [PubMed:34384145 ]
Lombardi Y, Hiesse C, Ridel C, Touzot M: From combined heart-kidney to kidney transplantation program: what nephrologists should know about dilated cardiomyopathy. Transpl Int. 2021 Aug;34(8):1573-1575. doi: 10.1111/tri.13948. [PubMed:34384144 ]
Kennedy LJ, Cukier S, Khoury L, Steeves D: 'You drink at home so they can go to work safely': A case study exploring alcohol marketing during the COVID-19 pandemic. Drug Alcohol Rev. 2021 Aug 12. doi: 10.1111/dar.13374. [PubMed:34384143 ]

Showing NP-Card for Boydine A (NP0013403)

MOL for NP0013403 (Boydine A)

3D MOL for NP0013403 (Boydine A)

3D SDF for NP0013403 (Boydine A)

3D-SDF for NP0013403 (Boydine A)

PDB for NP0013403 (Boydine A)

3D PDB for NP0013403 (Boydine A)

SMILES for NP0013403 (Boydine A)

INCHI for NP0013403 (Boydine A)

Structure for NP0013403 (Boydine A)

3D Structure for NP0013403 (Boydine A)