NP-MRD: Showing NP-Card for Sansanmycin O (NP0012983)

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Record Information

Version

2.0

Created at

2021-01-05 22:29:45 UTC

Updated at

2021-07-15 17:13:15 UTC

NP-MRD ID

NP0012983

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Sansanmycin O

Provided By

NPAtlas

Description

Sansanmycin O is found in Streptomyces sp. SS. Based on a literature review very few articles have been published on Sansanmycin O.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012122013D          

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M  END

     RDKit          3D

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M  END


  Mrv1652307012122013D          

111116  0  0  0  0            999 V2000
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M  END
> <DATABASE_ID>
NP0012983

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC(=O)[C@@]([H])(N([H])C(=O)N([H])[C@]([H])(C(=O)N([H])[C@]([H])(C(=O)N([H])C(\[H])=C1/O[C@@]([H])(N2C([H])=C([H])C(=O)N([H])C2=O)[C@]([H])(O[H])C1([H])[H])[C@@]([H])(N(C(=O)[C@@]1([H])N([H])C([H])([H])C2=C(O[H])C([H])=C([H])C([H])=C2C1([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])SC([H])([H])[H])C([H])([H])C1=C([H])N([H])C2=C([H])C([H])=C([H])C([H])=C12

> <INCHI_IDENTIFIER>
InChI=1S/C41H49N9O11S/c1-21(49(2)37(56)29-15-22-7-6-10-31(51)26(22)20-43-29)34(36(55)44-19-24-17-32(52)38(61-24)50-13-11-33(53)47-41(50)60)48-35(54)28(12-14-62-3)45-40(59)46-30(39(57)58)16-23-18-42-27-9-5-4-8-25(23)27/h4-11,13,18-19,21,28-30,32,34,38,42-43,51-52H,12,14-17,20H2,1-3H3,(H,44,55)(H,48,54)(H,57,58)(H2,45,46,59)(H,47,53,60)/b24-19-/t21-,28-,29-,30-,32+,34-,38+/m0/s1

> <INCHI_KEY>
OZXJFQKLEJFTBX-AAENJXTMSA-N

> <FORMULA>
C41H49N9O11S

> <MOLECULAR_WEIGHT>
875.96

> <EXACT_MASS>
875.327224608

> <JCHEM_ACCEPTOR_COUNT>
12

> <JCHEM_ATOM_COUNT>
111

> <JCHEM_AVERAGE_POLARIZABILITY>
89.06578654284597

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
10

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-2-({[(1S)-1-{[(1S,2S)-1-({[(2Z,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene]methyl}carbamoyl)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}propyl]carbamoyl}-3-(methylsulfanyl)propyl]carbamoyl}amino)-3-(1H-indol-3-yl)propanoic acid

> <ALOGPS_LOGP>
1.23

> <JCHEM_LOGP>
-3.0011134603617378

> <ALOGPS_LOGS>
-4.64

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
8.821289336478063

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.517119100199633

> <JCHEM_PKA_STRONGEST_BASIC>
7.830986339072134

> <JCHEM_POLAR_SURFACE_AREA>
283.85999999999996

> <JCHEM_REFRACTIVITY>
224.63180000000006

> <JCHEM_ROTATABLE_BOND_COUNT>
16

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.00e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-({[(1S)-1-{[(1S,2S)-1-({[(2Z,4R,5R)-5-(2,4-dioxo-3H-pyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene]methyl}carbamoyl)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}propyl]carbamoyl}-3-(methylsulfanyl)propyl]carbamoyl}amino)-3-(1H-indol-3-yl)propanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

111116  0  0  0  0  0  0  0  0999 V2000
   -0.0197   -4.9096   -1.6490 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7124   -5.0079   -2.1853 S   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9113   -5.6309   -1.0949 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5640   -4.8390   -0.0998 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0795   -4.0047    0.9876 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.3847   -3.6129    1.6844 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5269   -3.7914    3.0599 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6139   -4.2436    3.8144 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7534   -3.4684    3.7378 N   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9323   -3.6102    5.1427 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.4649   -2.4274    5.8740 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6580   -1.2070    5.7914 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.4269    1.7492    4.2710 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0932    1.8976    3.0756 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.2769   -0.1440    3.6055 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.8198   -4.7830    5.4718 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.6861   -0.9794    0.0430 C   0  0  2  0  0  0  0  0  0  0  0  0
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    2.6863    6.4535   -3.8661 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8457    5.7898   -4.1897 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9838    6.3470   -4.0799 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7409    4.5193   -4.6303 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5521    3.9104   -4.7524 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4963    2.7304   -5.1638 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1058    2.8527   -3.6472 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4691   -0.7500    0.8964 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0174   -0.8601    2.3738 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4082    0.2870    0.8130 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0446    1.6815    0.8740 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8061   -0.0228    0.7120 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0818   -1.2739    0.6843 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8658    0.9390    0.6565 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.1516    1.5143   -0.7264 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3221    2.3957   -0.6095 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5109    3.4424   -1.5216 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6086    4.2771   -1.4446 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5617    4.0960   -0.4493 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3882    3.0699    0.4549 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3501    2.9112    1.4368 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.2699    2.2417    0.3526 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1340    1.1418    1.3386 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1451    0.1825    0.9365 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.5582   -5.7094   -2.2317 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1452   -5.1971   -0.5766 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5273   -3.9846   -1.8953 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7799   -6.0428   -1.7778 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5945   -6.6774   -0.6714 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3948   -5.5388    0.4004 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3413   -4.1640   -0.6866 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4920   -4.5297    1.7305 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0981   -3.2338    1.0830 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.9168   -3.8654    5.5737 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.4000   -3.0661    0.2848 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.3198    1.3654   -1.5972 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6699   -0.4177   -4.0190 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4794    1.1929   -6.1617 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3175    1.4509   -6.0996 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7745    3.3921   -6.6042 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9422    3.6376   -5.8092 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7252    4.6286   -4.3733 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.6498    4.0441   -4.8676 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0940   -1.7358    0.8184 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7993   -0.4218    2.9976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9617   -0.3415    2.4904 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1198   -1.9114    2.6822 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6771    2.2349    1.6245 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0009    1.8318    1.2252 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2658    2.1498   -0.0836 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8685    1.7349    1.3954 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2878    1.9912   -1.2028 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4710    0.5949   -1.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7556    3.5534   -2.2804 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.7557    5.0902   -2.1563 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4129    4.7593   -0.4072 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.2096    2.1515    2.1019 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1330    0.6141    1.3601 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9664    1.5200    2.3570 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3612   -0.2780    0.0354 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
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  5 24  1  0
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 49100  1  0
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 62111  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0      -0.020  -4.910  -1.649  0.00  0.00           C+0
HETATM    2  S   UNK     0      -1.712  -5.008  -2.185  0.00  0.00           S+0
HETATM    3  C   UNK     0      -2.911  -5.631  -1.095  0.00  0.00           C+0
HETATM    4  C   UNK     0      -3.564  -4.839  -0.100  0.00  0.00           C+0
HETATM    5  C   UNK     0      -3.079  -4.005   0.988  0.00  0.00           C+0
HETATM    6  N   UNK     0      -4.385  -3.613   1.684  0.00  0.00           N+0
HETATM    7  C   UNK     0      -4.527  -3.791   3.060  0.00  0.00           C+0
HETATM    8  O   UNK     0      -3.614  -4.244   3.814  0.00  0.00           O+0
HETATM    9  N   UNK     0      -5.753  -3.468   3.738  0.00  0.00           N+0
HETATM   10  C   UNK     0      -5.932  -3.610   5.143  0.00  0.00           C+0
HETATM   11  C   UNK     0      -6.465  -2.427   5.874  0.00  0.00           C+0
HETATM   12  C   UNK     0      -5.658  -1.207   5.791  0.00  0.00           C+0
HETATM   13  C   UNK     0      -4.729  -0.785   6.748  0.00  0.00           C+0
HETATM   14  N   UNK     0      -4.154   0.341   6.328  0.00  0.00           N+0
HETATM   15  C   UNK     0      -4.653   0.696   5.135  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.427   1.749   4.271  0.00  0.00           C+0
HETATM   17  C   UNK     0      -5.093   1.898   3.076  0.00  0.00           C+0
HETATM   18  C   UNK     0      -6.026   0.937   2.749  0.00  0.00           C+0
HETATM   19  C   UNK     0      -6.277  -0.144   3.606  0.00  0.00           C+0
HETATM   20  C   UNK     0      -5.592  -0.262   4.791  0.00  0.00           C+0
HETATM   21  C   UNK     0      -6.820  -4.783   5.472  0.00  0.00           C+0
HETATM   22  O   UNK     0      -7.289  -5.485   4.553  0.00  0.00           O+0
HETATM   23  O   UNK     0      -7.114  -5.086   6.783  0.00  0.00           O+0
HETATM   24  C   UNK     0      -2.460  -2.690   0.656  0.00  0.00           C+0
HETATM   25  O   UNK     0      -3.284  -1.688   0.691  0.00  0.00           O+0
HETATM   26  N   UNK     0      -1.160  -2.388   0.331  0.00  0.00           N+0
HETATM   27  C   UNK     0      -0.686  -0.979   0.043  0.00  0.00           C+0
HETATM   28  C   UNK     0      -0.674  -0.762  -1.377  0.00  0.00           C+0
HETATM   29  O   UNK     0      -0.873  -1.789  -2.132  0.00  0.00           O+0
HETATM   30  N   UNK     0      -0.475   0.469  -2.068  0.00  0.00           N+0
HETATM   31  C   UNK     0      -0.502   0.500  -3.485  0.00  0.00           C+0
HETATM   32  C   UNK     0      -0.327   1.621  -4.192  0.00  0.00           C+0
HETATM   33  C   UNK     0      -0.335   1.767  -5.665  0.00  0.00           C+0
HETATM   34  C   UNK     0      -0.075   3.230  -5.919  0.00  0.00           C+0
HETATM   35  O   UNK     0      -1.228   3.761  -6.510  0.00  0.00           O+0
HETATM   36  C   UNK     0       0.104   3.884  -4.576  0.00  0.00           C+0
HETATM   37  N   UNK     0       1.394   4.525  -4.446  0.00  0.00           N+0
HETATM   38  C   UNK     0       1.462   5.792  -4.005  0.00  0.00           C+0
HETATM   39  C   UNK     0       2.686   6.454  -3.866  0.00  0.00           C+0
HETATM   40  C   UNK     0       3.846   5.790  -4.190  0.00  0.00           C+0
HETATM   41  O   UNK     0       4.984   6.347  -4.080  0.00  0.00           O+0
HETATM   42  N   UNK     0       3.741   4.519  -4.630  0.00  0.00           N+0
HETATM   43  C   UNK     0       2.552   3.910  -4.752  0.00  0.00           C+0
HETATM   44  O   UNK     0       2.496   2.730  -5.164  0.00  0.00           O+0
HETATM   45  O   UNK     0      -0.106   2.853  -3.647  0.00  0.00           O+0
HETATM   46  C   UNK     0       0.469  -0.750   0.896  0.00  0.00           C+0
HETATM   47  C   UNK     0       0.017  -0.860   2.374  0.00  0.00           C+0
HETATM   48  N   UNK     0       1.408   0.287   0.813  0.00  0.00           N+0
HETATM   49  C   UNK     0       1.045   1.682   0.874  0.00  0.00           C+0
HETATM   50  C   UNK     0       2.806  -0.023   0.712  0.00  0.00           C+0
HETATM   51  O   UNK     0       3.082  -1.274   0.684  0.00  0.00           O+0
HETATM   52  C   UNK     0       3.866   0.939   0.657  0.00  0.00           C+0
HETATM   53  C   UNK     0       4.152   1.514  -0.726  0.00  0.00           C+0
HETATM   54  C   UNK     0       5.322   2.396  -0.610  0.00  0.00           C+0
HETATM   55  C   UNK     0       5.511   3.442  -1.522  0.00  0.00           C+0
HETATM   56  C   UNK     0       6.609   4.277  -1.445  0.00  0.00           C+0
HETATM   57  C   UNK     0       7.562   4.096  -0.449  0.00  0.00           C+0
HETATM   58  C   UNK     0       7.388   3.070   0.455  0.00  0.00           C+0
HETATM   59  O   UNK     0       8.350   2.911   1.437  0.00  0.00           O+0
HETATM   60  C   UNK     0       6.270   2.242   0.353  0.00  0.00           C+0
HETATM   61  C   UNK     0       6.134   1.142   1.339  0.00  0.00           C+0
HETATM   62  N   UNK     0       5.145   0.183   0.937  0.00  0.00           N+0
HETATM   63  H   UNK     0       0.558  -5.709  -2.232  0.00  0.00           H+0
HETATM   64  H   UNK     0       0.145  -5.197  -0.577  0.00  0.00           H+0
HETATM   65  H   UNK     0       0.527  -3.985  -1.895  0.00  0.00           H+0
HETATM   66  H   UNK     0      -3.780  -6.043  -1.778  0.00  0.00           H+0
HETATM   67  H   UNK     0      -2.595  -6.677  -0.671  0.00  0.00           H+0
HETATM   68  H   UNK     0      -4.395  -5.539   0.400  0.00  0.00           H+0
HETATM   69  H   UNK     0      -4.341  -4.164  -0.687  0.00  0.00           H+0
HETATM   70  H   UNK     0      -2.492  -4.530   1.730  0.00  0.00           H+0
HETATM   71  H   UNK     0      -5.098  -3.234   1.083  0.00  0.00           H+0
HETATM   72  H   UNK     0      -6.535  -3.128   3.147  0.00  0.00           H+0
HETATM   73  H   UNK     0      -4.917  -3.865   5.574  0.00  0.00           H+0
HETATM   74  H   UNK     0      -6.600  -2.700   6.963  0.00  0.00           H+0
HETATM   75  H   UNK     0      -7.493  -2.232   5.480  0.00  0.00           H+0
HETATM   76  H   UNK     0      -4.508  -1.288   7.687  0.00  0.00           H+0
HETATM   77  H   UNK     0      -3.415   0.896   6.827  0.00  0.00           H+0
HETATM   78  H   UNK     0      -3.677   2.502   4.560  0.00  0.00           H+0
HETATM   79  H   UNK     0      -4.883   2.738   2.435  0.00  0.00           H+0
HETATM   80  H   UNK     0      -6.575   1.006   1.829  0.00  0.00           H+0
HETATM   81  H   UNK     0      -7.023  -0.869   3.318  0.00  0.00           H+0
HETATM   82  H   UNK     0      -7.980  -4.741   7.167  0.00  0.00           H+0
HETATM   83  H   UNK     0      -0.400  -3.066   0.285  0.00  0.00           H+0
HETATM   84  H   UNK     0      -1.553  -0.369   0.473  0.00  0.00           H+0
HETATM   85  H   UNK     0      -0.320   1.365  -1.597  0.00  0.00           H+0
HETATM   86  H   UNK     0      -0.670  -0.418  -4.019  0.00  0.00           H+0
HETATM   87  H   UNK     0       0.479   1.193  -6.162  0.00  0.00           H+0
HETATM   88  H   UNK     0      -1.317   1.451  -6.100  0.00  0.00           H+0
HETATM   89  H   UNK     0       0.775   3.392  -6.604  0.00  0.00           H+0
HETATM   90  H   UNK     0      -1.942   3.638  -5.809  0.00  0.00           H+0
HETATM   91  H   UNK     0      -0.725   4.629  -4.373  0.00  0.00           H+0
HETATM   92  H   UNK     0       0.541   6.332  -3.743  0.00  0.00           H+0
HETATM   93  H   UNK     0       2.781   7.465  -3.514  0.00  0.00           H+0
HETATM   94  H   UNK     0       4.650   4.044  -4.868  0.00  0.00           H+0
HETATM   95  H   UNK     0       1.094  -1.736   0.818  0.00  0.00           H+0
HETATM   96  H   UNK     0       0.799  -0.422   2.998  0.00  0.00           H+0
HETATM   97  H   UNK     0      -0.962  -0.342   2.490  0.00  0.00           H+0
HETATM   98  H   UNK     0      -0.120  -1.911   2.682  0.00  0.00           H+0
HETATM   99  H   UNK     0       1.677   2.235   1.625  0.00  0.00           H+0
HETATM  100  H   UNK     0       0.001   1.832   1.225  0.00  0.00           H+0
HETATM  101  H   UNK     0       1.266   2.150  -0.084  0.00  0.00           H+0
HETATM  102  H   UNK     0       3.869   1.735   1.395  0.00  0.00           H+0
HETATM  103  H   UNK     0       3.288   1.991  -1.203  0.00  0.00           H+0
HETATM  104  H   UNK     0       4.471   0.595  -1.324  0.00  0.00           H+0
HETATM  105  H   UNK     0       4.756   3.553  -2.280  0.00  0.00           H+0
HETATM  106  H   UNK     0       6.756   5.090  -2.156  0.00  0.00           H+0
HETATM  107  H   UNK     0       8.413   4.759  -0.407  0.00  0.00           H+0
HETATM  108  H   UNK     0       8.210   2.151   2.102  0.00  0.00           H+0
HETATM  109  H   UNK     0       7.133   0.614   1.360  0.00  0.00           H+0
HETATM  110  H   UNK     0       5.966   1.520   2.357  0.00  0.00           H+0
HETATM  111  H   UNK     0       5.361  -0.278   0.035  0.00  0.00           H+0
CONECT    1    2   63   64   65                                             
CONECT    2    1    3                                                       
CONECT    3    2    4   66   67                                             
CONECT    4    3    5   68   69                                             
CONECT    5    4    6   24   70                                             
CONECT    6    5    7   71                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   72                                                  
CONECT   10    9   11   21   73                                             
CONECT   11   10   12   74   75                                             
CONECT   12   11   13   20                                                  
CONECT   13   12   14   76                                                  
CONECT   14   13   15   77                                                  
CONECT   15   14   16   20                                                  
CONECT   16   15   17   78                                                  
CONECT   17   16   18   79                                                  
CONECT   18   17   19   80                                                  
CONECT   19   18   20   81                                                  
CONECT   20   19   12   15                                                  
CONECT   21   10   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   82                                                       
CONECT   24    5   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27   83                                                  
CONECT   27   26   28   46   84                                             
CONECT   28   27   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31   85                                                  
CONECT   31   30   32   86                                                  
CONECT   32   31   33   45                                                  
CONECT   33   32   34   87   88                                             
CONECT   34   33   35   36   89                                             
CONECT   35   34   90                                                       
CONECT   36   34   37   45   91                                             
CONECT   37   36   38   43                                                  
CONECT   38   37   39   92                                                  
CONECT   39   38   40   93                                                  
CONECT   40   39   41   42                                                  
CONECT   41   40                                                            
CONECT   42   40   43   94                                                  
CONECT   43   42   44   37                                                  
CONECT   44   43                                                            
CONECT   45   36   32                                                       
CONECT   46   27   47   48   95                                             
CONECT   47   46   96   97   98                                             
CONECT   48   46   49   50                                                  
CONECT   49   48   99  100  101                                             
CONECT   50   48   51   52                                                  
CONECT   51   50                                                            
CONECT   52   50   53   62  102                                             
CONECT   53   52   54  103  104                                             
CONECT   54   53   55   60                                                  
CONECT   55   54   56  105                                                  
CONECT   56   55   57  106                                                  
CONECT   57   56   58  107                                                  
CONECT   58   57   59   60                                                  
CONECT   59   58  108                                                       
CONECT   60   58   61   54                                                  
CONECT   61   60   62  109  110                                             
CONECT   62   61   52  111                                                  
CONECT   63    1                                                            
CONECT   64    1                                                            
CONECT   65    1                                                            
CONECT   66    3                                                            
CONECT   67    3                                                            
CONECT   68    4                                                            
CONECT   69    4                                                            
CONECT   70    5                                                            
CONECT   71    6                                                            
CONECT   72    9                                                            
CONECT   73   10                                                            
CONECT   74   11                                                            
CONECT   75   11                                                            
CONECT   76   13                                                            
CONECT   77   14                                                            
CONECT   78   16                                                            
CONECT   79   17                                                            
CONECT   80   18                                                            
CONECT   81   19                                                            
CONECT   82   23                                                            
CONECT   83   26                                                            
CONECT   84   27                                                            
CONECT   85   30                                                            
CONECT   86   31                                                            
CONECT   87   33                                                            
CONECT   88   33                                                            
CONECT   89   34                                                            
CONECT   90   35                                                            
CONECT   91   36                                                            
CONECT   92   38                                                            
CONECT   93   39                                                            
CONECT   94   42                                                            
CONECT   95   46                                                            
CONECT   96   47                                                            
CONECT   97   47                                                            
CONECT   98   47                                                            
CONECT   99   49                                                            
CONECT  100   49                                                            
CONECT  101   49                                                            
CONECT  102   52                                                            
CONECT  103   53                                                            
CONECT  104   53                                                            
CONECT  105   55                                                            
CONECT  106   56                                                            
CONECT  107   57                                                            
CONECT  108   59                                                            
CONECT  109   61                                                            
CONECT  110   61                                                            
CONECT  111   62                                                            
MASTER        0    0    0    0    0    0    0    0  111    0  232    0
END

RDKit          3D

111116  0  0  0  0  0  0  0  0999 V2000
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M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
(2S)-2-({[(1S)-1-{[(1S,2S)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}-1-({[(2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene]methyl}-C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-(methylsulfanyl)propyl]-C-hydroxycarbonimidoyl}amino)-3-(1H-indol-3-yl)propanoate	Generator
(2S)-2-({[(1S)-1-{[(1S,2S)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}-1-({[(2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene]methyl}-C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-(methylsulphanyl)propyl]-C-hydroxycarbonimidoyl}amino)-3-(1H-indol-3-yl)propanoate	Generator
(2S)-2-({[(1S)-1-{[(1S,2S)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}-1-({[(2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene]methyl}-C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-(methylsulphanyl)propyl]-C-hydroxycarbonimidoyl}amino)-3-(1H-indol-3-yl)propanoic acid	Generator

Chemical Formula

C₄₁H₄₉N₉O₁₁S

Average Mass

875.9600 Da

Monoisotopic Mass

875.32722 Da

IUPAC Name

(2S)-2-({[(1S)-1-{[(1S,2S)-1-({[(2Z,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene]methyl}carbamoyl)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}propyl]carbamoyl}-3-(methylsulfanyl)propyl]carbamoyl}amino)-3-(1H-indol-3-yl)propanoic acid

Traditional Name

(2S)-2-({[(1S)-1-{[(1S,2S)-1-({[(2Z,4R,5R)-5-(2,4-dioxo-3H-pyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene]methyl}carbamoyl)-2-{1-[(3S)-8-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}propyl]carbamoyl}-3-(methylsulfanyl)propyl]carbamoyl}amino)-3-(1H-indol-3-yl)propanoic acid

CAS Registry Number

Not Available

SMILES

CSCC[C@H](NC(=O)N[C@@H](CC1=CNC2=CC=CC=C12)C(O)=O)C(=O)N[C@@H]([C@H](C)N(C)C(=O)[C@@H]1CC2=C(CN1)C(O)=CC=C2)C(=O)N\C=C1\C[C@@H](O)[C@@H](O1)N1C=CC(=O)NC1=O

InChI Identifier

InChI=1S/C41H49N9O11S/c1-21(49(2)37(56)29-15-22-7-6-10-31(51)26(22)20-43-29)34(36(55)44-19-24-17-32(52)38(61-24)50-13-11-33(53)47-41(50)60)48-35(54)28(12-14-62-3)45-40(59)46-30(39(57)58)16-23-18-42-27-9-5-4-8-25(23)27/h4-11,13,18-19,21,28-30,32,34,38,42-43,51-52H,12,14-17,20H2,1-3H3,(H,44,55)(H,48,54)(H,57,58)(H2,45,46,59)(H,47,53,60)/b24-19-/t21-,28-,29-,30-,32+,34-,38+/m0/s1

InChI Key

OZXJFQKLEJFTBX-AAENJXTMSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Streptomyces sp. SS	NPAtlas	24964393

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.23	ALOGPS
logP	-3	ChemAxon
logS	-4.6	ALOGPS
pKa (Strongest Acidic)	3.52	ChemAxon
pKa (Strongest Basic)	7.83	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	12	ChemAxon
Hydrogen Donor Count	10	ChemAxon
Polar Surface Area	283.86 Å²	ChemAxon
Rotatable Bond Count	16	ChemAxon
Refractivity	224.63 m³·mol⁻¹	ChemAxon
Polarizability	89.07 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

NPAtlas ID

NPA013478

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

78437875

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

139586831

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Sansanmycin O (NP0012983)

MOL for NP0012983 (Sansanmycin O)

3D MOL for NP0012983 (Sansanmycin O)

3D SDF for NP0012983 (Sansanmycin O)

3D-SDF for NP0012983 (Sansanmycin O)

PDB for NP0012983 (Sansanmycin O)

3D PDB for NP0012983 (Sansanmycin O)

SMILES for NP0012983 (Sansanmycin O)

INCHI for NP0012983 (Sansanmycin O)

Structure for NP0012983 (Sansanmycin O)

3D Structure for NP0012983 (Sansanmycin O)