NP-MRD: Showing NP-Card for Myxochelin A (NP0012950)

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Record Information

Version

2.0

Created at

2021-01-05 22:28:30 UTC

Updated at

2021-07-15 17:13:10 UTC

NP-MRD ID

NP0012950

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Myxochelin A

Provided By

NPAtlas

Description

Myxochelin A is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Myxochelin A is found in Archangium. Myxochelin A was first documented in 1989 (PMID: 2493439). Based on a literature review very few articles have been published on Myxochelin A.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652306242119323D          

 53 54  0  0  0  0            999 V2000
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   -3.7033    0.4031    0.5378 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0797   -0.5089    1.3859 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7289   -0.9767    1.0623 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.7979   -1.7135   -0.2471 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3933   -2.2103   -0.5793 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5893   -1.0934   -0.7070 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9449   -1.6717   -1.0348 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9865   -2.4506   -2.3117 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7161   -1.6852   -3.4344 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9335   -0.5888   -1.0367 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.9761   -0.5655   -0.0948 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0094   -1.5081    0.7312 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9637    0.4828   -0.0685 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9085    1.5136   -0.9891 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8252    2.5625   -1.0286 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8212    2.5430   -0.0936 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8976    1.5464    0.8177 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9157    1.5254    1.7744 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.8972    0.7532    3.0386 O   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
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  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
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 29 53  1  0  0  0  0
M  END

     RDKit          3D

 53 54  0  0  0  0  0  0  0  0999 V2000
   -3.0736    0.8283   -0.5156 O   0  0  0  0  0  0  0  0  0  0  0  0
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    6.8976    1.5464    0.8177 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9157    1.5254    1.7744 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END


  Mrv1652306242119323D          

 53 54  0  0  0  0            999 V2000
   -3.0736    0.8283   -0.5156 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7033    0.4031    0.5378 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.8385    0.1421   -1.7410 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1364    1.5343   -1.7186 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7681    3.3549   -1.7499 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5546    3.3414   -0.0908 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5985    2.2498    1.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6772   -1.2699    2.0684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9297    2.1110   -1.0064 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1902    3.0949   -0.7848 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5738    2.4165    1.1655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6172    0.1191    3.7371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8558   -0.6146    3.5174 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  8 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
 20 21  1  0  0  0  0
  2 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 26 28  2  0  0  0  0
 28 29  1  0  0  0  0
 20 14  1  0  0  0  0
 28 22  1  0  0  0  0
  3 30  1  0  0  0  0
  4 31  1  0  0  0  0
  4 32  1  0  0  0  0
  5 33  1  0  0  0  0
  5 34  1  0  0  0  0
  6 35  1  0  0  0  0
  6 36  1  0  0  0  0
  7 37  1  0  0  0  0
  7 38  1  0  0  0  0
  8 39  1  1  0  0  0
  9 40  1  0  0  0  0
  9 41  1  0  0  0  0
 10 42  1  0  0  0  0
 11 43  1  0  0  0  0
 15 44  1  0  0  0  0
 16 45  1  0  0  0  0
 17 46  1  0  0  0  0
 19 47  1  0  0  0  0
 21 48  1  0  0  0  0
 23 49  1  0  0  0  0
 24 50  1  0  0  0  0
 25 51  1  0  0  0  0
 27 52  1  0  0  0  0
 29 53  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0012950

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C(O[H])C(=C([H])C([H])=C1[H])C(=O)N([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[C@]([H])(N([H])C(=O)C1=C([H])C([H])=C([H])C(O[H])=C1O[H])C([H])([H])O[H]

> <INCHI_IDENTIFIER>
InChI=1S/C20H24N2O7/c23-11-12(22-20(29)14-7-4-9-16(25)18(14)27)5-1-2-10-21-19(28)13-6-3-8-15(24)17(13)26/h3-4,6-9,12,23-27H,1-2,5,10-11H2,(H,21,28)(H,22,29)/t12-/m0/s1

> <INCHI_KEY>
WNBVGSNESTZACV-LBPRGKRZSA-N

> <FORMULA>
C20H24N2O7

> <MOLECULAR_WEIGHT>
404.419

> <EXACT_MASS>
404.158351121

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
41.76338860591393

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
N-[(5S)-5-[(2,3-dihydroxyphenyl)formamido]-6-hydroxyhexyl]-2,3-dihydroxybenzamide

> <ALOGPS_LOGP>
1.25

> <JCHEM_LOGP>
2.4008942549999994

> <ALOGPS_LOGS>
-3.44

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
8.608533657234958

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.006678157752589

> <JCHEM_PKA_STRONGEST_BASIC>
-1.3404320292645844

> <JCHEM_POLAR_SURFACE_AREA>
159.35

> <JCHEM_REFRACTIVITY>
106.09429999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.48e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
N-[(5S)-5-[(2,3-dihydroxyphenyl)formamido]-6-hydroxyhexyl]-2,3-dihydroxybenzamide

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

 53 54  0  0  0  0  0  0  0  0999 V2000
   -3.0736    0.8283   -0.5156 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7033    0.4031    0.5378 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0797   -0.5089    1.3859 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7289   -0.9767    1.0623 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7979   -1.7135   -0.2471 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3933   -2.2103   -0.5793 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5893   -1.0934   -0.7070 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9449   -1.6717   -1.0348 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9865   -2.4506   -2.3117 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7161   -1.6852   -3.4344 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9335   -0.5888   -1.0367 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.9761   -0.5655   -0.0948 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0094   -1.5081    0.7312 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9637    0.4828   -0.0685 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9085    1.5136   -0.9891 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8252    2.5625   -1.0286 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8212    2.5430   -0.0936 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8976    1.5464    0.8177 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9157    1.5254    1.7744 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9731    0.4845    0.8611 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1433   -0.4696    1.8231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0321    0.9248    0.7476 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5618    1.8461   -0.1793 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8203    2.3819   -0.0388 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5835    2.0084    1.0359 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1222    1.1095    1.9799 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8972    0.7532    3.0386 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8290    0.5832    1.8013 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3710   -0.3073    2.7355 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4781   -0.8946    2.2326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1231   -0.0448    0.9722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2900   -1.5707    1.8698 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4000   -2.6577   -0.1458 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2424   -1.1589   -1.0581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4893   -2.8303   -1.5113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1216   -2.9101    0.2308 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6886   -0.6259    0.3009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2814   -0.3018   -1.3930 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1992   -2.3704   -0.2108 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0402   -2.8077   -2.4240 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3241   -3.3165   -2.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5943   -0.7368   -3.2664 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8385    0.1421   -1.7410 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1364    1.5343   -1.7186 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7681    3.3549   -1.7499 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5546    3.3414   -0.0908 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5985    2.2498    1.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6772   -1.2699    2.0684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9297    2.1110   -1.0064 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1902    3.0949   -0.7848 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.5738    2.4165    1.1655 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6172    0.1191    3.7371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8558   -0.6146    3.5174 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
  8 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 18 20  2  0
 20 21  1  0
  2 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 26 27  1  0
 26 28  2  0
 28 29  1  0
 20 14  1  0
 28 22  1  0
  3 30  1  0
  4 31  1  0
  4 32  1  0
  5 33  1  0
  5 34  1  0
  6 35  1  0
  6 36  1  0
  7 37  1  0
  7 38  1  0
  8 39  1  1
  9 40  1  0
  9 41  1  0
 10 42  1  0
 11 43  1  0
 15 44  1  0
 16 45  1  0
 17 46  1  0
 19 47  1  0
 21 48  1  0
 23 49  1  0
 24 50  1  0
 25 51  1  0
 27 52  1  0
 29 53  1  0
M  END

HEADER    PROTEIN                                 24-JUN-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-JUN-21         0                                  
HETATM    1  O   UNK     0      -3.074   0.828  -0.516  0.00  0.00           O+0
HETATM    2  C   UNK     0      -3.703   0.403   0.538  0.00  0.00           C+0
HETATM    3  N   UNK     0      -3.080  -0.509   1.386  0.00  0.00           N+0
HETATM    4  C   UNK     0      -1.729  -0.977   1.062  0.00  0.00           C+0
HETATM    5  C   UNK     0      -1.798  -1.714  -0.247  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.393  -2.210  -0.579  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.589  -1.093  -0.707  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.945  -1.672  -1.035  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.986  -2.451  -2.312  0.00  0.00           C+0
HETATM   10  O   UNK     0       1.716  -1.685  -3.434  0.00  0.00           O+0
HETATM   11  N   UNK     0       2.934  -0.589  -1.037  0.00  0.00           N+0
HETATM   12  C   UNK     0       3.976  -0.566  -0.095  0.00  0.00           C+0
HETATM   13  O   UNK     0       4.009  -1.508   0.731  0.00  0.00           O+0
HETATM   14  C   UNK     0       4.964   0.483  -0.069  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.909   1.514  -0.989  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.825   2.563  -1.029  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.821   2.543  -0.094  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.898   1.546   0.818  0.00  0.00           C+0
HETATM   19  O   UNK     0       7.916   1.525   1.774  0.00  0.00           O+0
HETATM   20  C   UNK     0       5.973   0.485   0.861  0.00  0.00           C+0
HETATM   21  O   UNK     0       6.143  -0.470   1.823  0.00  0.00           O+0
HETATM   22  C   UNK     0      -5.032   0.925   0.748  0.00  0.00           C+0
HETATM   23  C   UNK     0      -5.562   1.846  -0.179  0.00  0.00           C+0
HETATM   24  C   UNK     0      -6.820   2.382  -0.039  0.00  0.00           C+0
HETATM   25  C   UNK     0      -7.583   2.008   1.036  0.00  0.00           C+0
HETATM   26  C   UNK     0      -7.122   1.109   1.980  0.00  0.00           C+0
HETATM   27  O   UNK     0      -7.897   0.753   3.039  0.00  0.00           O+0
HETATM   28  C   UNK     0      -5.829   0.583   1.801  0.00  0.00           C+0
HETATM   29  O   UNK     0      -5.371  -0.307   2.736  0.00  0.00           O+0
HETATM   30  H   UNK     0      -3.478  -0.895   2.233  0.00  0.00           H+0
HETATM   31  H   UNK     0      -1.123  -0.045   0.972  0.00  0.00           H+0
HETATM   32  H   UNK     0      -1.290  -1.571   1.870  0.00  0.00           H+0
HETATM   33  H   UNK     0      -2.400  -2.658  -0.146  0.00  0.00           H+0
HETATM   34  H   UNK     0      -2.242  -1.159  -1.058  0.00  0.00           H+0
HETATM   35  H   UNK     0      -0.489  -2.830  -1.511  0.00  0.00           H+0
HETATM   36  H   UNK     0      -0.122  -2.910   0.231  0.00  0.00           H+0
HETATM   37  H   UNK     0       0.689  -0.626   0.301  0.00  0.00           H+0
HETATM   38  H   UNK     0       0.281  -0.302  -1.393  0.00  0.00           H+0
HETATM   39  H   UNK     0       2.199  -2.370  -0.211  0.00  0.00           H+0
HETATM   40  H   UNK     0       3.040  -2.808  -2.424  0.00  0.00           H+0
HETATM   41  H   UNK     0       1.324  -3.317  -2.233  0.00  0.00           H+0
HETATM   42  H   UNK     0       1.594  -0.737  -3.266  0.00  0.00           H+0
HETATM   43  H   UNK     0       2.838   0.142  -1.741  0.00  0.00           H+0
HETATM   44  H   UNK     0       4.136   1.534  -1.719  0.00  0.00           H+0
HETATM   45  H   UNK     0       5.768   3.355  -1.750  0.00  0.00           H+0
HETATM   46  H   UNK     0       7.555   3.341  -0.091  0.00  0.00           H+0
HETATM   47  H   UNK     0       8.598   2.250   1.793  0.00  0.00           H+0
HETATM   48  H   UNK     0       5.677  -1.270   2.068  0.00  0.00           H+0
HETATM   49  H   UNK     0      -4.930   2.111  -1.006  0.00  0.00           H+0
HETATM   50  H   UNK     0      -7.190   3.095  -0.785  0.00  0.00           H+0
HETATM   51  H   UNK     0      -8.574   2.417   1.165  0.00  0.00           H+0
HETATM   52  H   UNK     0      -7.617   0.119   3.737  0.00  0.00           H+0
HETATM   53  H   UNK     0      -5.856  -0.615   3.517  0.00  0.00           H+0
CONECT    1    2                                                            
CONECT    2    1    3   22                                                  
CONECT    3    2    4   30                                                  
CONECT    4    3    5   31   32                                             
CONECT    5    4    6   33   34                                             
CONECT    6    5    7   35   36                                             
CONECT    7    6    8   37   38                                             
CONECT    8    7    9   11   39                                             
CONECT    9    8   10   40   41                                             
CONECT   10    9   42                                                       
CONECT   11    8   12   43                                                  
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15   20                                                  
CONECT   15   14   16   44                                                  
CONECT   16   15   17   45                                                  
CONECT   17   16   18   46                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18   47                                                       
CONECT   20   18   21   14                                                  
CONECT   21   20   48                                                       
CONECT   22    2   23   28                                                  
CONECT   23   22   24   49                                                  
CONECT   24   23   25   50                                                  
CONECT   25   24   26   51                                                  
CONECT   26   25   27   28                                                  
CONECT   27   26   52                                                       
CONECT   28   26   29   22                                                  
CONECT   29   28   53                                                       
CONECT   30    3                                                            
CONECT   31    4                                                            
CONECT   32    4                                                            
CONECT   33    5                                                            
CONECT   34    5                                                            
CONECT   35    6                                                            
CONECT   36    6                                                            
CONECT   37    7                                                            
CONECT   38    7                                                            
CONECT   39    8                                                            
CONECT   40    9                                                            
CONECT   41    9                                                            
CONECT   42   10                                                            
CONECT   43   11                                                            
CONECT   44   15                                                            
CONECT   45   16                                                            
CONECT   46   17                                                            
CONECT   47   19                                                            
CONECT   48   21                                                            
CONECT   49   23                                                            
CONECT   50   24                                                            
CONECT   51   25                                                            
CONECT   52   27                                                            
CONECT   53   29                                                            
MASTER        0    0    0    0    0    0    0    0   53    0  108    0
END

RDKit          3D

53 54  0  0  0  0  0  0  0  0999 V2000
   -3.0736    0.8283   -0.5156 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7033    0.4031    0.5378 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0797   -0.5089    1.3859 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7289   -0.9767    1.0623 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7979   -1.7135   -0.2471 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3933   -2.2103   -0.5793 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5893   -1.0934   -0.7070 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9449   -1.6717   -1.0348 C   0  0  1  0  0  0  0  0  0  0  0  0
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    3.9761   -0.5655   -0.0948 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0094   -1.5081    0.7312 O   0  0  0  0  0  0  0  0  0  0  0  0
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    4.9085    1.5136   -0.9891 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8252    2.5625   -1.0286 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8212    2.5430   -0.0936 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8976    1.5464    0.8177 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9157    1.5254    1.7744 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9731    0.4845    0.8611 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1433   -0.4696    1.8231 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0321    0.9248    0.7476 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5618    1.8461   -0.1793 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8203    2.3819   -0.0388 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5835    2.0084    1.0359 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1222    1.1095    1.9799 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8972    0.7532    3.0386 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8290    0.5832    1.8013 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3710   -0.3073    2.7355 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4781   -0.8946    2.2326 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1231   -0.0448    0.9722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2900   -1.5707    1.8698 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4000   -2.6577   -0.1458 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2424   -1.1589   -1.0581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4893   -2.8303   -1.5113 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1216   -2.9101    0.2308 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6886   -0.6259    0.3009 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2814   -0.3018   -1.3930 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1992   -2.3704   -0.2108 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0402   -2.8077   -2.4240 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3241   -3.3165   -2.2333 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5943   -0.7368   -3.2664 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8385    0.1421   -1.7410 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1364    1.5343   -1.7186 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7681    3.3549   -1.7499 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5546    3.3414   -0.0908 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5985    2.2498    1.7929 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6772   -1.2699    2.0684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9297    2.1110   -1.0064 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1902    3.0949   -0.7848 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -7.6172    0.1191    3.7371 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8558   -0.6146    3.5174 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
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  2 22  1  0
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 20 14  1  0
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  3 30  1  0
  4 31  1  0
  4 32  1  0
  5 33  1  0
  5 34  1  0
  6 35  1  0
  6 36  1  0
  7 37  1  0
  7 38  1  0
  8 39  1  1
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  9 41  1  0
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 29 53  1  0
M  END

View in JSmol View NMR Assignments

Synonyms

Value	Source
N,N'-bis-(2,3-dihydroxybenzoyl)lysinol	MeSH
N-[(5S)-5-{[(2,3-dihydroxyphenyl)(hydroxy)methylidene]amino}-6-hydroxyhexyl]-2,3-dihydroxybenzene-1-carboximidate	Generator

Chemical Formula

C₂₀H₂₄N₂O₇

Average Mass

404.4190 Da

Monoisotopic Mass

404.15835 Da

IUPAC Name

N-[(5S)-5-[(2,3-dihydroxyphenyl)formamido]-6-hydroxyhexyl]-2,3-dihydroxybenzamide

Traditional Name

N-[(5S)-5-[(2,3-dihydroxyphenyl)formamido]-6-hydroxyhexyl]-2,3-dihydroxybenzamide

CAS Registry Number

Not Available

SMILES

OC[C@H](CCCCNC(=O)C1=C(O)C(O)=CC=C1)NC(=O)C1=C(O)C(O)=CC=C1

InChI Identifier

InChI=1S/C20H24N2O7/c23-11-12(22-20(29)14-7-4-9-16(25)18(14)27)5-1-2-10-21-19(28)13-6-3-8-15(24)17(13)26/h3-4,6-9,12,23-27H,1-2,5,10-11H2,(H,21,28)(H,22,29)/t12-/m0/s1

InChI Key

WNBVGSNESTZACV-LBPRGKRZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Archangium	NPAtlas	2493439

Species Where Detected

Species Name	Source	Reference
Angiococcus disciformis An d30	KNApSAcK Database	22123792

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.25	ALOGPS
logP	2.4	ChemAxon
logS	-3.4	ALOGPS
pKa (Strongest Acidic)	8.01	ChemAxon
pKa (Strongest Basic)	-1.3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	159.35 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	106.09 m³·mol⁻¹	ChemAxon
Polarizability	41.76 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA002219

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00017648

Chemspider ID

17251814

KEGG Compound ID

C12220

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

16093504

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Kunze B, Bedorf N, Kohl W, Hofle G, Reichenbach H: Myxochelin A, a new iron-chelating compound from Angiococcus disciformis (Myxobacterales). Production, isolation, physico-chemical and biological properties. J Antibiot (Tokyo). 1989 Jan;42(1):14-7. doi: 10.7164/antibiotics.42.14. [PubMed:2493439 ]

Showing NP-Card for Myxochelin A (NP0012950)

MOL for NP0012950 (Myxochelin A)

3D MOL for NP0012950 (Myxochelin A)

3D SDF for NP0012950 (Myxochelin A)

3D-SDF for NP0012950 (Myxochelin A)

PDB for NP0012950 (Myxochelin A)

3D PDB for NP0012950 (Myxochelin A)

SMILES for NP0012950 (Myxochelin A)

INCHI for NP0012950 (Myxochelin A)

Structure for NP0012950 (Myxochelin A)

3D Structure for NP0012950 (Myxochelin A)