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Record Information
Version1.0
Created at2021-01-05 22:04:30 UTC
Updated at2021-07-15 17:12:45 UTC
NP-MRD IDNP0012798
Secondary Accession NumbersNone
Natural Product Identification
Common NameC-1027 chromophore-V
Provided ByNPAtlasNPAtlas Logo
Description C-1027 chromophore-V is found in Streptomyces sp. It was first documented in 2014 (PMID: 24796308). Based on a literature review very few articles have been published on (3R,4R,14R,19S)-19-amino-22,25-dichloro-4-{[(2S,3R,4R,5S)-5-(dimethylamino)-3,4-dihydroxy-6,6-dimethyloxan-2-yl]oxy}-23-hydroxy-17-oxo-2,16-dioxapentacyclo[18.2.2.1⁹,¹³.0³,¹⁰.0⁴,⁸]Pentacosa-1(22),5,7,9,11,13(25),20,23-octaen-14-yl 3-hydroxy-7-methoxy-2-methylidene-2H-1,4-benzoxazine-5-carboxylate.
Structure
Thumb
Synonyms
ValueSource
(3R,4R,14R,19S)-19-Amino-22,25-dichloro-4-{[(2S,3R,4R,5S)-5-(dimethylamino)-3,4-dihydroxy-6,6-dimethyloxan-2-yl]oxy}-23-hydroxy-17-oxo-2,16-dioxapentacyclo[18.2.2.1,.0,.0,]pentacosa-1(22),5,7,9,11,13(25),20,23-octaen-14-yl 3-hydroxy-7-methoxy-2-methylidene-2H-1,4-benzoxazine-5-carboxylic acidGenerator
Chemical FormulaC43H43Cl2N3O13
Average Mass880.7300 Da
Monoisotopic Mass879.21729 Da
IUPAC Name(3R,4R,14R,19S)-19-amino-23,25-dichloro-4-{[(2S,3R,4R,5S)-5-(dimethylamino)-3,4-dihydroxy-6,6-dimethyloxan-2-yl]oxy}-22-hydroxy-17-oxo-2,16-dioxapentacyclo[18.2.2.1^{9,13}.0^{3,10}.0^{4,8}]pentacosa-1(22),5,7,9(25),10,12,20,23-octaen-14-yl 7-methoxy-2-methylidene-3-oxo-3,4-dihydro-2H-1,4-benzoxazine-5-carboxylate
Traditional Name(3R,4R,14R,19S)-19-amino-23,25-dichloro-4-{[(2S,3R,4R,5S)-5-(dimethylamino)-3,4-dihydroxy-6,6-dimethyloxan-2-yl]oxy}-22-hydroxy-17-oxo-2,16-dioxapentacyclo[18.2.2.1^{9,13}.0^{3,10}.0^{4,8}]pentacosa-1(22),5,7,9(25),10,12,20,23-octaen-14-yl 7-methoxy-2-methylidene-3-oxo-4H-1,4-benzoxazine-5-carboxylate
CAS Registry NumberNot Available
SMILES
COC1=CC(C(=O)O[C@H]2COC(=O)C[C@H](N)C3=CC(O)=C(O[C@@H]4C5=C(C6=CC=C[C@]46O[C@@H]4OC(C)(C)[C@H]([C@@H](O)[C@H]4O)N(C)C)C(Cl)=C2C=C5)C(Cl)=C3)=C2NC(=O)C(=C)OC2=C1
InChI Identifier
InChI=1S/C43H43Cl2N3O13/c1-18-39(53)47-33-23(14-20(55-6)15-28(33)57-18)40(54)58-29-17-56-30(50)16-26(46)19-12-25(44)36(27(49)13-19)59-38-22-10-9-21(29)32(45)31(22)24-8-7-11-43(24,38)61-41-35(52)34(51)37(48(4)5)42(2,3)60-41/h7-15,26,29,34-35,37-38,41,49,51-52H,1,16-17,46H2,2-6H3,(H,47,53)/t26-,29-,34-,35+,37-,38+,41-,43+/m0/s1
InChI KeyLGXLUMUDRRLAQZ-KPASYSSUSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces sp.NPAtlas
Chemical Taxonomy
ClassificationNot classified
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP4.73ALOGPS
logP4.21ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)8.92ChemAxon
pKa (Strongest Basic)8.45ChemAxon
Physiological Charge2ChemAxon
Hydrogen Acceptor Count13ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area217.8 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity222.65 m³·mol⁻¹ChemAxon
Polarizability86.93 ųChemAxon
Number of Rings8ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
NPAtlas IDNPA002269
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID34451990
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139583730
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Moon K, Ahn CH, Shin Y, Won TH, Ko K, Lee SK, Oh KB, Shin J, Nam SI, Oh DC: New benzoxazine secondary metabolites from an arctic actinomycete. Mar Drugs. 2014 Apr 30;12(5):2526-38. doi: 10.3390/md12052526. [PubMed:24796308 ]