NP-MRD: Showing NP-Card for Nocardiamide A (NP0011706)

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Record Information

Version

2.0

Created at

2021-01-05 21:18:53 UTC

Updated at

2021-07-15 17:09:42 UTC

NP-MRD ID

NP0011706

Secondary Accession Numbers

None

Natural Product Identification

Common Name

Nocardiamide A

Provided By

NPAtlas

Description

Nocardiamide A is found in Nocardiopsis sp. CNX037. Based on a literature review very few articles have been published on Nocardiamide A.

Structure

MOL 3D MOL SDF 3D SDF PDB SMILES InChI


  Mrv1652307012121553D          

107108  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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M  END


  Mrv1652307012121553D          

107108  0  0  0  0            999 V2000
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    7.9213   -0.0900    0.7357 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4259    1.3379    1.9411 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5711    2.2598    3.9774 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3509    1.3907    3.6960 H   0  0  0  0  0  0  0  0  0  0  0  0
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 47107  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0011706

> <DATABASE_NAME>
NP-MRD

> <SMILES>
[H]OC1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])[C@]1([H])N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@]([H])(N([H])C(=O)[C@@]([H])(N([H])C(=O)[C@]([H])(N([H])C1=O)C([H])(C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])[H])[C@@]([H])(C([H])([H])[H])C([H])([H])C([H])([H])[H]

> <INCHI_IDENTIFIER>
InChI=1S/C36H58N6O7/c1-11-22(10)30-36(49)38-26(17-23-12-14-24(43)15-13-23)32(45)39-28(20(6)7)34(47)41-29(21(8)9)35(48)40-27(19(4)5)33(46)37-25(16-18(2)3)31(44)42-30/h12-15,18-22,25-30,43H,11,16-17H2,1-10H3,(H,37,46)(H,38,49)(H,39,45)(H,40,48)(H,41,47)(H,42,44)/t22-,25+,26-,27+,28+,29-,30-/m0/s1

> <INCHI_KEY>
IWXQKCGWVSNLIQ-NQPQJUOKSA-N

> <FORMULA>
C36H58N6O7

> <MOLECULAR_WEIGHT>
686.895

> <EXACT_MASS>
686.436698232

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
107

> <JCHEM_AVERAGE_POLARIZABILITY>
75.65955241425601

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,6R,9R,12S,15R,18S)-3-[(2S)-butan-2-yl]-18-[(4-hydroxyphenyl)methyl]-6-(2-methylpropyl)-9,12,15-tris(propan-2-yl)-1,4,7,10,13,16-hexaazacyclooctadecane-2,5,8,11,14,17-hexone

> <ALOGPS_LOGP>
2.53

> <JCHEM_LOGP>
3.382306768666667

> <ALOGPS_LOGS>
-4.23

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.575951685750452

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.457255714462006

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9794728908804595

> <JCHEM_POLAR_SURFACE_AREA>
194.82999999999998

> <JCHEM_REFRACTIVITY>
184.64130000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.00e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(3S,6R,9R,12S,15R,18S)-3-[(2S)-butan-2-yl]-18-[(4-hydroxyphenyl)methyl]-9,12,15-triisopropyl-6-(2-methylpropyl)-1,4,7,10,13,16-hexaazacyclooctadecane-2,5,8,11,14,17-hexone

> <JCHEM_VEBER_RULE>
0

$$$$

     RDKit          3D

107108  0  0  0  0  0  0  0  0999 V2000
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  1  2  1  0
  2  3  1  0
  3  4  1  0
  3  5  1  0
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  7  8  2  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
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  9 14  1  0
 14 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 17 21  1  0
 21 22  1  0
 22 23  2  0
 22 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 24 28  1  0
 28 29  1  0
 29 30  2  0
 29 31  1  0
 31 32  1  0
 32 33  1  0
 32 34  1  0
 31 35  1  0
 35 36  1  0
 36 37  2  0
 36 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  2  0
 41 42  1  0
 42 43  2  0
 43 44  1  0
 43 45  1  0
 45 46  2  0
 38 47  1  0
 47 48  1  0
 48 49  2  0
 48  5  1  0
 46 40  1  0
  1 50  1  0
  1 51  1  0
  1 52  1  0
  2 53  1  0
  2 54  1  0
  3 55  1  6
  4 56  1  0
  4 57  1  0
  4 58  1  0
  5 59  1  6
  6 60  1  0
  9 61  1  1
 10 62  1  0
 10 63  1  0
 11 64  1  6
 12 65  1  0
 12 66  1  0
 12 67  1  0
 13 68  1  0
 13 69  1  0
 13 70  1  0
 14 71  1  0
 17 72  1  1
 18 73  1  1
 19 74  1  0
 19 75  1  0
 19 76  1  0
 20 77  1  0
 20 78  1  0
 20 79  1  0
 21 80  1  0
 24 81  1  6
 25 82  1  1
 26 83  1  0
 26 84  1  0
 26 85  1  0
 27 86  1  0
 27 87  1  0
 27 88  1  0
 28 89  1  0
 31 90  1  1
 32 91  1  6
 33 92  1  0
 33 93  1  0
 33 94  1  0
 34 95  1  0
 34 96  1  0
 34 97  1  0
 35 98  1  0
 38 99  1  6
 39100  1  0
 39101  1  0
 41102  1  0
 42103  1  0
 44104  1  0
 45105  1  0
 46106  1  0
 47107  1  0
M  END

HEADER    PROTEIN                                 01-JUL-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   01-JUL-21         0                                  
HETATM    1  C   UNK     0       1.844   4.424  -3.818  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.504   4.378  -2.312  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.040   2.999  -2.047  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.169   2.662  -2.878  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.777   2.632  -0.612  0.00  0.00           C+0
HETATM    6  N   UNK     0      -0.238   3.487  -0.040  0.00  0.00           N+0
HETATM    7  C   UNK     0      -1.137   3.201   0.995  0.00  0.00           C+0
HETATM    8  O   UNK     0      -1.105   3.901   2.088  0.00  0.00           O+0
HETATM    9  C   UNK     0      -2.179   2.150   1.016  0.00  0.00           C+0
HETATM   10  C   UNK     0      -3.480   2.671   1.585  0.00  0.00           C+0
HETATM   11  C   UNK     0      -4.136   3.772   0.866  0.00  0.00           C+0
HETATM   12  C   UNK     0      -3.426   5.060   0.699  0.00  0.00           C+0
HETATM   13  C   UNK     0      -5.452   4.073   1.609  0.00  0.00           C+0
HETATM   14  N   UNK     0      -2.392   1.514  -0.269  0.00  0.00           N+0
HETATM   15  C   UNK     0      -2.630   0.156  -0.522  0.00  0.00           C+0
HETATM   16  O   UNK     0      -2.412  -0.200  -1.736  0.00  0.00           O+0
HETATM   17  C   UNK     0      -3.087  -0.912   0.370  0.00  0.00           C+0
HETATM   18  C   UNK     0      -4.157  -1.775  -0.269  0.00  0.00           C+0
HETATM   19  C   UNK     0      -5.336  -0.801  -0.545  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.817  -2.288  -1.637  0.00  0.00           C+0
HETATM   21  N   UNK     0      -2.138  -1.550   1.194  0.00  0.00           N+0
HETATM   22  C   UNK     0      -1.417  -2.742   1.122  0.00  0.00           C+0
HETATM   23  O   UNK     0      -0.329  -2.847   1.826  0.00  0.00           O+0
HETATM   24  C   UNK     0      -1.656  -3.979   0.364  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.335  -5.186   1.294  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.579  -6.456   0.518  0.00  0.00           C+0
HETATM   27  C   UNK     0      -2.305  -5.138   2.457  0.00  0.00           C+0
HETATM   28  N   UNK     0      -0.825  -4.113  -0.816  0.00  0.00           N+0
HETATM   29  C   UNK     0       0.020  -3.226  -1.439  0.00  0.00           C+0
HETATM   30  O   UNK     0      -0.227  -2.914  -2.668  0.00  0.00           O+0
HETATM   31  C   UNK     0       1.251  -2.530  -0.877  0.00  0.00           C+0
HETATM   32  C   UNK     0       2.257  -2.611  -2.039  0.00  0.00           C+0
HETATM   33  C   UNK     0       3.574  -2.017  -1.786  0.00  0.00           C+0
HETATM   34  C   UNK     0       2.454  -4.118  -2.268  0.00  0.00           C+0
HETATM   35  N   UNK     0       0.918  -1.176  -0.519  0.00  0.00           N+0
HETATM   36  C   UNK     0       1.350  -0.337   0.504  0.00  0.00           C+0
HETATM   37  O   UNK     0       0.554   0.010   1.472  0.00  0.00           O+0
HETATM   38  C   UNK     0       2.690   0.299   0.707  0.00  0.00           C+0
HETATM   39  C   UNK     0       3.441  -0.451   1.815  0.00  0.00           C+0
HETATM   40  C   UNK     0       4.782   0.138   2.037  0.00  0.00           C+0
HETATM   41  C   UNK     0       5.855  -0.249   1.225  0.00  0.00           C+0
HETATM   42  C   UNK     0       7.111   0.240   1.395  0.00  0.00           C+0
HETATM   43  C   UNK     0       7.393   1.149   2.385  0.00  0.00           C+0
HETATM   44  O   UNK     0       8.690   1.641   2.545  0.00  0.00           O+0
HETATM   45  C   UNK     0       6.375   1.554   3.201  0.00  0.00           C+0
HETATM   46  C   UNK     0       5.090   1.047   3.020  0.00  0.00           C+0
HETATM   47  N   UNK     0       2.493   1.705   1.095  0.00  0.00           N+0
HETATM   48  C   UNK     0       1.963   2.711   0.263  0.00  0.00           C+0
HETATM   49  O   UNK     0       2.582   3.829   0.270  0.00  0.00           O+0
HETATM   50  H   UNK     0       2.140   3.416  -4.176  0.00  0.00           H+0
HETATM   51  H   UNK     0       2.664   5.112  -4.019  0.00  0.00           H+0
HETATM   52  H   UNK     0       0.902   4.676  -4.324  0.00  0.00           H+0
HETATM   53  H   UNK     0       0.674   5.117  -2.120  0.00  0.00           H+0
HETATM   54  H   UNK     0       2.431   4.668  -1.821  0.00  0.00           H+0
HETATM   55  H   UNK     0       1.864   2.303  -2.388  0.00  0.00           H+0
HETATM   56  H   UNK     0      -0.535   1.654  -2.634  0.00  0.00           H+0
HETATM   57  H   UNK     0      -0.964   3.400  -2.643  0.00  0.00           H+0
HETATM   58  H   UNK     0       0.076   2.664  -3.965  0.00  0.00           H+0
HETATM   59  H   UNK     0       0.391   1.569  -0.684  0.00  0.00           H+0
HETATM   60  H   UNK     0      -0.286   4.465  -0.462  0.00  0.00           H+0
HETATM   61  H   UNK     0      -1.814   1.372   1.737  0.00  0.00           H+0
HETATM   62  H   UNK     0      -3.201   3.051   2.621  0.00  0.00           H+0
HETATM   63  H   UNK     0      -4.212   1.876   1.762  0.00  0.00           H+0
HETATM   64  H   UNK     0      -4.503   3.357  -0.126  0.00  0.00           H+0
HETATM   65  H   UNK     0      -4.203   5.775   0.252  0.00  0.00           H+0
HETATM   66  H   UNK     0      -2.522   5.061   0.091  0.00  0.00           H+0
HETATM   67  H   UNK     0      -3.196   5.550   1.671  0.00  0.00           H+0
HETATM   68  H   UNK     0      -6.078   3.179   1.679  0.00  0.00           H+0
HETATM   69  H   UNK     0      -5.247   4.441   2.625  0.00  0.00           H+0
HETATM   70  H   UNK     0      -5.985   4.891   1.070  0.00  0.00           H+0
HETATM   71  H   UNK     0      -2.357   2.220  -1.080  0.00  0.00           H+0
HETATM   72  H   UNK     0      -3.762  -0.328   1.131  0.00  0.00           H+0
HETATM   73  H   UNK     0      -4.523  -2.487   0.450  0.00  0.00           H+0
HETATM   74  H   UNK     0      -6.145  -1.311  -1.076  0.00  0.00           H+0
HETATM   75  H   UNK     0      -5.633  -0.367   0.431  0.00  0.00           H+0
HETATM   76  H   UNK     0      -4.965   0.052  -1.173  0.00  0.00           H+0
HETATM   77  H   UNK     0      -4.219  -1.667  -2.468  0.00  0.00           H+0
HETATM   78  H   UNK     0      -4.362  -3.272  -1.743  0.00  0.00           H+0
HETATM   79  H   UNK     0      -2.779  -2.479  -1.848  0.00  0.00           H+0
HETATM   80  H   UNK     0      -1.898  -0.992   2.114  0.00  0.00           H+0
HETATM   81  H   UNK     0      -2.722  -4.169   0.111  0.00  0.00           H+0
HETATM   82  H   UNK     0      -0.290  -5.103   1.588  0.00  0.00           H+0
HETATM   83  H   UNK     0      -1.998  -7.199   1.225  0.00  0.00           H+0
HETATM   84  H   UNK     0      -2.281  -6.282  -0.318  0.00  0.00           H+0
HETATM   85  H   UNK     0      -0.596  -6.813   0.149  0.00  0.00           H+0
HETATM   86  H   UNK     0      -1.859  -5.680   3.323  0.00  0.00           H+0
HETATM   87  H   UNK     0      -3.254  -5.625   2.125  0.00  0.00           H+0
HETATM   88  H   UNK     0      -2.508  -4.066   2.721  0.00  0.00           H+0
HETATM   89  H   UNK     0      -0.915  -5.084  -1.263  0.00  0.00           H+0
HETATM   90  H   UNK     0       1.726  -3.122  -0.079  0.00  0.00           H+0
HETATM   91  H   UNK     0       1.759  -2.252  -2.970  0.00  0.00           H+0
HETATM   92  H   UNK     0       3.877  -2.035  -0.744  0.00  0.00           H+0
HETATM   93  H   UNK     0       3.638  -0.957  -2.162  0.00  0.00           H+0
HETATM   94  H   UNK     0       4.397  -2.543  -2.351  0.00  0.00           H+0
HETATM   95  H   UNK     0       2.865  -4.294  -3.287  0.00  0.00           H+0
HETATM   96  H   UNK     0       1.519  -4.670  -2.091  0.00  0.00           H+0
HETATM   97  H   UNK     0       3.255  -4.416  -1.554  0.00  0.00           H+0
HETATM   98  H   UNK     0       0.175  -0.748  -1.168  0.00  0.00           H+0
HETATM   99  H   UNK     0       3.351   0.289  -0.144  0.00  0.00           H+0
HETATM  100  H   UNK     0       3.523  -1.492   1.516  0.00  0.00           H+0
HETATM  101  H   UNK     0       2.821  -0.363   2.764  0.00  0.00           H+0
HETATM  102  H   UNK     0       5.670  -0.964   0.434  0.00  0.00           H+0
HETATM  103  H   UNK     0       7.921  -0.090   0.736  0.00  0.00           H+0
HETATM  104  H   UNK     0       9.426   1.338   1.941  0.00  0.00           H+0
HETATM  105  H   UNK     0       6.571   2.260   3.977  0.00  0.00           H+0
HETATM  106  H   UNK     0       4.351   1.391   3.696  0.00  0.00           H+0
HETATM  107  H   UNK     0       2.782   1.934   2.100  0.00  0.00           H+0
CONECT    1    2   50   51   52                                             
CONECT    2    1    3   53   54                                             
CONECT    3    2    4    5   55                                             
CONECT    4    3   56   57   58                                             
CONECT    5    3    6   48   59                                             
CONECT    6    5    7   60                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   14   61                                             
CONECT   10    9   11   62   63                                             
CONECT   11   10   12   13   64                                             
CONECT   12   11   65   66   67                                             
CONECT   13   11   68   69   70                                             
CONECT   14    9   15   71                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   21   72                                             
CONECT   18   17   19   20   73                                             
CONECT   19   18   74   75   76                                             
CONECT   20   18   77   78   79                                             
CONECT   21   17   22   80                                                  
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   28   81                                             
CONECT   25   24   26   27   82                                             
CONECT   26   25   83   84   85                                             
CONECT   27   25   86   87   88                                             
CONECT   28   24   29   89                                                  
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32   35   90                                             
CONECT   32   31   33   34   91                                             
CONECT   33   32   92   93   94                                             
CONECT   34   32   95   96   97                                             
CONECT   35   31   36   98                                                  
CONECT   36   35   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   39   47   99                                             
CONECT   39   38   40  100  101                                             
CONECT   40   39   41   46                                                  
CONECT   41   40   42  102                                                  
CONECT   42   41   43  103                                                  
CONECT   43   42   44   45                                                  
CONECT   44   43  104                                                       
CONECT   45   43   46  105                                                  
CONECT   46   45   40  106                                                  
CONECT   47   38   48  107                                                  
CONECT   48   47   49    5                                                  
CONECT   49   48                                                            
CONECT   50    1                                                            
CONECT   51    1                                                            
CONECT   52    1                                                            
CONECT   53    2                                                            
CONECT   54    2                                                            
CONECT   55    3                                                            
CONECT   56    4                                                            
CONECT   57    4                                                            
CONECT   58    4                                                            
CONECT   59    5                                                            
CONECT   60    6                                                            
CONECT   61    9                                                            
CONECT   62   10                                                            
CONECT   63   10                                                            
CONECT   64   11                                                            
CONECT   65   12                                                            
CONECT   66   12                                                            
CONECT   67   12                                                            
CONECT   68   13                                                            
CONECT   69   13                                                            
CONECT   70   13                                                            
CONECT   71   14                                                            
CONECT   72   17                                                            
CONECT   73   18                                                            
CONECT   74   19                                                            
CONECT   75   19                                                            
CONECT   76   19                                                            
CONECT   77   20                                                            
CONECT   78   20                                                            
CONECT   79   20                                                            
CONECT   80   21                                                            
CONECT   81   24                                                            
CONECT   82   25                                                            
CONECT   83   26                                                            
CONECT   84   26                                                            
CONECT   85   26                                                            
CONECT   86   27                                                            
CONECT   87   27                                                            
CONECT   88   27                                                            
CONECT   89   28                                                            
CONECT   90   31                                                            
CONECT   91   32                                                            
CONECT   92   33                                                            
CONECT   93   33                                                            
CONECT   94   33                                                            
CONECT   95   34                                                            
CONECT   96   34                                                            
CONECT   97   34                                                            
CONECT   98   35                                                            
CONECT   99   38                                                            
CONECT  100   39                                                            
CONECT  101   39                                                            
CONECT  102   41                                                            
CONECT  103   42                                                            
CONECT  104   44                                                            
CONECT  105   45                                                            
CONECT  106   46                                                            
CONECT  107   47                                                            
MASTER        0    0    0    0    0    0    0    0  107    0  216    0
END

RDKit          3D

107108  0  0  0  0  0  0  0  0999 V2000
    1.8439    4.4236   -3.8184 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5035    4.3784   -2.3116 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0400    2.9992   -2.0469 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1691    2.6615   -2.8779 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7773    2.6323   -0.6122 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2376    3.4866   -0.0399 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1371    3.2010    0.9954 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1050    3.9014    2.0880 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1792    2.1495    1.0159 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4799    2.6707    1.5846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1363    3.7716    0.8656 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.4256    5.0599    0.6991 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4517    4.0734    1.6091 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3921    1.5137   -0.2687 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6304    0.1563   -0.5217 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4115   -0.1996   -1.7364 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0869   -0.9119    0.3696 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.1575   -1.7752   -0.2692 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.3360   -0.8010   -0.5446 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8167   -2.2877   -1.6366 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1376   -1.5503    1.1941 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4171   -2.7418    1.1217 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3294   -2.8466    1.8261 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6556   -3.9794    0.3636 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3345   -5.1864    1.2938 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.5785   -6.4560    0.5184 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3049   -5.1380    2.4573 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8246   -4.1126   -0.8160 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0199   -3.2260   -1.4391 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2266   -2.9143   -2.6679 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2512   -2.5296   -0.8771 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2569   -2.6113   -2.0389 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5739   -2.0169   -1.7859 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4537   -4.1180   -2.2680 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View NMR Assignments

Synonyms

Not Available

Chemical Formula

C₃₆H₅₈N₆O₇

Average Mass

686.8950 Da

Monoisotopic Mass

686.43670 Da

IUPAC Name

(3S,6R,9R,12S,15R,18S)-3-[(2S)-butan-2-yl]-18-[(4-hydroxyphenyl)methyl]-6-(2-methylpropyl)-9,12,15-tris(propan-2-yl)-1,4,7,10,13,16-hexaazacyclooctadecane-2,5,8,11,14,17-hexone

Traditional Name

(3S,6R,9R,12S,15R,18S)-3-[(2S)-butan-2-yl]-18-[(4-hydroxyphenyl)methyl]-9,12,15-triisopropyl-6-(2-methylpropyl)-1,4,7,10,13,16-hexaazacyclooctadecane-2,5,8,11,14,17-hexone

CAS Registry Number

Not Available

SMILES

CC[C@H](C)[C@@H]1NC(=O)[C@@H](CC(C)C)NC(=O)[C@H](NC(=O)[C@@H](NC(=O)[C@H](NC(=O)[C@H](CC2=CC=C(O)C=C2)NC1=O)C(C)C)C(C)C)C(C)C

InChI Identifier

InChI=1S/C36H58N6O7/c1-11-22(10)30-36(49)38-26(17-23-12-14-24(43)15-13-23)32(45)39-28(20(6)7)34(47)41-29(21(8)9)35(48)40-27(19(4)5)33(46)37-25(16-18(2)3)31(44)42-30/h12-15,18-22,25-30,43H,11,16-17H2,1-10H3,(H,37,46)(H,38,49)(H,39,45)(H,40,48)(H,41,47)(H,42,44)/t22-,25+,26-,27+,28+,29-,30-/m0/s1

InChI Key

IWXQKCGWVSNLIQ-NQPQJUOKSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Nocardiopsis sp. CNX037	NPAtlas	23586970

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.53	ALOGPS
logP	3.38	ChemAxon
logS	-4.2	ALOGPS
pKa (Strongest Acidic)	9.46	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	194.83 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	184.64 m³·mol⁻¹	ChemAxon
Polarizability	75.66 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

NPAtlas ID

NPA004392

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

29355665

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71665487

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Showing NP-Card for Nocardiamide A (NP0011706)

MOL for NP0011706 (Nocardiamide A)

3D MOL for NP0011706 (Nocardiamide A)

3D SDF for NP0011706 (Nocardiamide A)

3D-SDF for NP0011706 (Nocardiamide A)

PDB for NP0011706 (Nocardiamide A)

3D PDB for NP0011706 (Nocardiamide A)

SMILES for NP0011706 (Nocardiamide A)

INCHI for NP0011706 (Nocardiamide A)

Structure for NP0011706 (Nocardiamide A)

3D Structure for NP0011706 (Nocardiamide A)